RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 WDR75Q8IWA0 830 aaKnown RBP7.51□□□□□ -1.21
YBX3-210ENST00000540975 PBKQ96KB5 322 aa7.51□□□□□ -1.21
YBX3-210ENST00000540975 IL17RBQ9NRM6 502 aa7.51□□□□□ -1.21
YBX3-210ENST00000540975 OBP2AQ9NY56 170 aa7.51□□□□□ -1.21
YBX3-210ENST00000540975 EHD3Q9NZN3 535 aa7.51□□□□□ -1.21
YBX3-210ENST00000540975 TPCN1Q9ULQ1 816 aa7.51□□□□□ -1.21
YBX3-210ENST00000540975 SHOC2Q9UQ13 582 aa7.51□□□□□ -1.21
YBX3-210ENST00000540975 FRMPD2Q68DX3 1309 aaPredicted RBP7.51□□□□□ -1.21
YBX3-210ENST00000540975 hCG_1984214I3L0E3 225 aa7.5□□□□□ -1.21
YBX3-210ENST00000540975 TBX3O15119 743 aa7.5□□□□□ -1.21
YBX3-210ENST00000540975 PPFIA2O75334 1257 aa7.5□□□□□ -1.21
YBX3-210ENST00000540975 HRGP04196 525 aa7.5□□□□□ -1.21
YBX3-210ENST00000540975 SUMO3P55854 103 aaPredicted RBP7.5□□□□□ -1.21
YBX3-210ENST00000540975 WNT3P56703 355 aa7.5□□□□□ -1.21
YBX3-210ENST00000540975 SLC13A2Q13183 592 aa7.5□□□□□ -1.21
YBX3-210ENST00000540975 BMPR2Q13873 1038 aa7.5□□□□□ -1.21
YBX3-210ENST00000540975 ARHGAP40Q5TG30 622 aa7.5□□□□□ -1.21
YBX3-210ENST00000540975 RNF220Q5VTB9 566 aa7.5□□□□□ -1.21
YBX3-210ENST00000540975 GRASPQ7Z6J2 395 aaPredicted RBP7.5□□□□□ -1.21
YBX3-210ENST00000540975 ZNF280BQ86YH2 543 aa7.5□□□□□ -1.21
YBX3-210ENST00000540975 FAM156AQ8NDB6 213 aa7.5□□□□□ -1.21
YBX3-210ENST00000540975 SUCLG2Q96I99 432 aa7.5□□□□□ -1.21
YBX3-210ENST00000540975 TIMP4Q99727 224 aa7.5□□□□□ -1.21
YBX3-210ENST00000540975 KLK15Q9H2R5 256 aa7.5□□□□□ -1.21
YBX3-210ENST00000540975 R3HDMLQ9H3Y0 253 aa7.5□□□□□ -1.21
YBX3-210ENST00000540975 CPNE7Q9UBL6 633 aa7.5□□□□□ -1.21
YBX3-210ENST00000540975 SERTAD3Q9UJW9 196 aa7.5□□□□□ -1.21
YBX3-210ENST00000540975 NDRG4Q9ULP0 352 aaKnown RBP7.5□□□□□ -1.21
YBX3-210ENST00000540975 ST3GAL5Q9UNP4 418 aa7.5□□□□□ -1.21
YBX3-210ENST00000540975 MRPS17Q9Y2R5 130 aaKnown RBP7.5□□□□□ -1.21
YBX3-210ENST00000540975 COX11Q9Y6N1 276 aa7.5□□□□□ -1.21
YBX3-210ENST00000540975 LINC00473A8K010 186 aa7.49□□□□□ -1.21
YBX3-210ENST00000540975 OVOL3O00110 214 aa7.49□□□□□ -1.21
YBX3-210ENST00000540975 FRS3O43559 492 aa7.49□□□□□ -1.21
YBX3-210ENST00000540975 IGLV2-14P01704 120 aa7.49□□□□□ -1.21
YBX3-210ENST00000540975 ZFXP17010 805 aaPredicted RBP7.49□□□□□ -1.21
YBX3-210ENST00000540975 PPIFP30405 207 aaKnown RBP7.49□□□□□ -1.21
YBX3-210ENST00000540975 LRPAP1P30533 357 aa7.49□□□□□ -1.21
YBX3-210ENST00000540975 CACNB3P54284 484 aa7.49□□□□□ -1.21
YBX3-210ENST00000540975 ELLP55199 621 aaPredicted RBP7.49□□□□□ -1.21
YBX3-210ENST00000540975 SP2Q02086 613 aa7.49□□□□□ -1.21
YBX3-210ENST00000540975 E2F2Q14209 437 aa7.49□□□□□ -1.21
YBX3-210ENST00000540975 CCDC149Q6ZUS6 474 aa7.49□□□□□ -1.21
YBX3-210ENST00000540975 ARHGEF25Q86VW2 580 aa7.49□□□□□ -1.21
YBX3-210ENST00000540975 BBC3Q96PG8 261 aaPredicted RBP7.49□□□□□ -1.21
YBX3-210ENST00000540975 ENTPD2Q9Y5L3 495 aa7.49□□□□□ -1.21
YBX3-210ENST00000540975 ISM1B1AKI9 464 aa7.48□□□□□ -1.21
YBX3-210ENST00000540975 TPP1O14773 563 aa7.48□□□□□ -1.21
YBX3-210ENST00000540975 ZBED1O96006 694 aa7.48□□□□□ -1.21
YBX3-210ENST00000540975 ATF3P18847 181 aa7.48□□□□□ -1.21
YBX3-210ENST00000540975 EIF2B5Q13144 721 aaKnown RBP7.48□□□□□ -1.21
YBX3-210ENST00000540975 KIAA0753Q2KHM9 967 aa7.48□□□□□ -1.21
YBX3-210ENST00000540975 GAS2L3Q86XJ1 694 aa7.48□□□□□ -1.21
YBX3-210ENST00000540975 BOLLQ8N9W6 283 aaKnown RBP7.48□□□□□ -1.21
YBX3-210ENST00000540975 ATRIPQ8WXE1 791 aa7.48□□□□□ -1.21
YBX3-210ENST00000540975 MAML1Q92585 1016 aa7.48□□□□□ -1.21
YBX3-210ENST00000540975 ZNF518BQ9C0D4 1074 aa7.48□□□□□ -1.21
YBX3-210ENST00000540975 MS4A7Q9GZW8 240 aaPredicted RBP7.48□□□□□ -1.21
YBX3-210ENST00000540975 BHMT2Q9H2M3 363 aa7.48□□□□□ -1.21
YBX3-210ENST00000540975 SERTAD4Q9NUC0 356 aa7.48□□□□□ -1.21
YBX3-210ENST00000540975 ASB6Q9NWX5 421 aa7.48□□□□□ -1.21
YBX3-210ENST00000540975 STK32BQ9NY57 414 aa7.48□□□□□ -1.21
YBX3-210ENST00000540975 TMEM233B4DJY2 109 aa7.47□□□□□ -1.21
YBX3-210ENST00000540975 TLR5O60602 858 aa7.47□□□□□ -1.21
YBX3-210ENST00000540975 C1QL1O75973 258 aa7.47□□□□□ -1.21
YBX3-210ENST00000540975 PARNO95453 639 aaKnown RBP7.47□□□□□ -1.21
YBX3-210ENST00000540975 MYF5P13349 255 aa7.47□□□□□ -1.21
YBX3-210ENST00000540975 SATB1Q01826 763 aa7.47□□□□□ -1.21
YBX3-210ENST00000540975 MYO1EQ12965 1108 aa7.47□□□□□ -1.21
YBX3-210ENST00000540975 RAB32Q13637 225 aa7.47□□□□□ -1.21
YBX3-210ENST00000540975 CNGA2Q16280 664 aa7.47□□□□□ -1.21
YBX3-210ENST00000540975 PLAC9Q5JTB6 97 aa7.47□□□□□ -1.21
YBX3-210ENST00000540975 AKNAD1Q5T1N1 836 aa7.47□□□□□ -1.21
YBX3-210ENST00000540975 CYB5RLQ6IPT4 315 aa7.47□□□□□ -1.21
YBX3-210ENST00000540975 RGS7BPQ6MZT1 257 aaPredicted RBP7.47□□□□□ -1.21
YBX3-210ENST00000540975 DARS2Q6PI48 645 aaKnown RBP7.47□□□□□ -1.21
YBX3-210ENST00000540975 RD3Q7Z3Z2 195 aa7.47□□□□□ -1.21
YBX3-210ENST00000540975 MPP5Q8N3R9 675 aa7.47□□□□□ -1.21
YBX3-210ENST00000540975 LRTOMTQ8WZ04 291 aa7.47□□□□□ -1.21
YBX3-210ENST00000540975 UROC1Q96N76 676 aa7.47□□□□□ -1.21
YBX3-210ENST00000540975 HAPLN3Q96S86 360 aa7.47□□□□□ -1.21
YBX3-210ENST00000540975 A1CFQ9NQ94 594 aaKnown RBP7.47□□□□□ -1.21
YBX3-210ENST00000540975 PRDM11Q9NQV5 511 aa7.47□□□□□ -1.21
YBX3-210ENST00000540975 KAT6AQ92794 2004 aa7.46□□□□□ -1.22
YBX3-210ENST00000540975 GOLIM4O00461 696 aa7.46□□□□□ -1.22
YBX3-210ENST00000540975 SLC16A3O15427 465 aaKnown RBP7.46□□□□□ -1.22
YBX3-210ENST00000540975 URI1O94763 535 aaPredicted RBP7.46□□□□□ -1.22
YBX3-210ENST00000540975 TTLL1O95922 423 aa7.46□□□□□ -1.22
YBX3-210ENST00000540975 ERBB2P04626 1255 aa7.46□□□□□ -1.22
YBX3-210ENST00000540975 WT1P19544 449 aaPredicted RBP7.46□□□□□ -1.22
YBX3-210ENST00000540975 DGKEP52429 567 aa7.46□□□□□ -1.22
YBX3-210ENST00000540975 FMO1Q01740 532 aa7.46□□□□□ -1.22
YBX3-210ENST00000540975 ZIK1Q3SY52 487 aaPredicted RBP7.46□□□□□ -1.22
YBX3-210ENST00000540975 MGAT5BQ3V5L5 792 aa7.46□□□□□ -1.22
YBX3-210ENST00000540975 PLA1AQ53H76 456 aa7.46□□□□□ -1.22
YBX3-210ENST00000540975 TSTD2Q5T7W7 516 aa7.46□□□□□ -1.22
YBX3-210ENST00000540975 MAVSQ7Z434 540 aa7.46□□□□□ -1.22
YBX3-210ENST00000540975 ATG4AQ8WYN0 398 aa7.46□□□□□ -1.22
YBX3-210ENST00000540975 RAPGEF4Q8WZA2 1011 aa7.46□□□□□ -1.22
YBX3-210ENST00000540975 APIPQ96GX9 242 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms