RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 MAGEA11P43364 429 aa18.33■□□□□ 0.52
CACNA2D4-211ENST00000540728 PSMC1P62191 440 aaKnown RBP18.33■□□□□ 0.52
CACNA2D4-211ENST00000540728 FAM160A1Q05DH4 1040 aa18.33■□□□□ 0.52
CACNA2D4-211ENST00000540728 NCOA4Q13772 614 aa18.33■□□□□ 0.52
CACNA2D4-211ENST00000540728 NFIL3Q16649 462 aa18.33■□□□□ 0.52
CACNA2D4-211ENST00000540728 DDR2Q16832 855 aa18.33■□□□□ 0.52
CACNA2D4-211ENST00000540728 ZNF699Q32M78 642 aa18.33■□□□□ 0.52
CACNA2D4-211ENST00000540728 ZNF667Q5HYK9 610 aa18.33■□□□□ 0.52
CACNA2D4-211ENST00000540728 STXBP5Q5T5C0 1151 aa18.33■□□□□ 0.52
CACNA2D4-211ENST00000540728 TDRD10Q5VZ19 366 aaKnown RBP18.33■□□□□ 0.52
CACNA2D4-211ENST00000540728 PLEKHO2Q8TD55 490 aa18.33■□□□□ 0.52
CACNA2D4-211ENST00000540728 MRPS31Q92665 395 aaKnown RBP18.33■□□□□ 0.52
CACNA2D4-211ENST00000540728 NELL2Q99435 816 aa18.33■□□□□ 0.52
CACNA2D4-211ENST00000540728 MRPL45Q9BRJ2 306 aaKnown RBP18.33■□□□□ 0.52
CACNA2D4-211ENST00000540728 IL21Q9HBE4 155 aa18.33■□□□□ 0.52
CACNA2D4-211ENST00000540728 HEBP1Q9NRV9 189 aa18.33■□□□□ 0.52
CACNA2D4-211ENST00000540728 MRPS17Q9Y2R5 130 aaKnown RBP18.33■□□□□ 0.52
CACNA2D4-211ENST00000540728 IKBKBO14920 756 aa18.32■□□□□ 0.52
CACNA2D4-211ENST00000540728 NCAM2O15394 837 aa18.32■□□□□ 0.52
CACNA2D4-211ENST00000540728 ATP2C2O75185 946 aa18.32■□□□□ 0.52
CACNA2D4-211ENST00000540728 C4BPAP04003 597 aaKnown RBP18.32■□□□□ 0.52
CACNA2D4-211ENST00000540728 KRT13P13646 458 aa18.32■□□□□ 0.52
CACNA2D4-211ENST00000540728 P4HA1P13674 534 aa18.32■□□□□ 0.52
CACNA2D4-211ENST00000540728 HMGA1P17096 107 aaKnown RBP18.32■□□□□ 0.52
CACNA2D4-211ENST00000540728 CD72P21854 359 aa18.32■□□□□ 0.52
CACNA2D4-211ENST00000540728 DDX6P26196 483 aaKnown RBP eCLIP18.32■□□□□ 0.52
CACNA2D4-211ENST00000540728 WEE1P30291 646 aa18.32■□□□□ 0.52
CACNA2D4-211ENST00000540728 GPR15P49685 360 aa18.32■□□□□ 0.52
CACNA2D4-211ENST00000540728 NLRP12P59046 1061 aa18.32■□□□□ 0.52
CACNA2D4-211ENST00000540728 CYP4F8P98187 520 aa18.32■□□□□ 0.52
CACNA2D4-211ENST00000540728 CYP27A1Q02318 531 aa18.32■□□□□ 0.52
CACNA2D4-211ENST00000540728 PNOCQ13519 176 aa18.32■□□□□ 0.52
CACNA2D4-211ENST00000540728 SDHAF4Q5VUM1 108 aa18.32■□□□□ 0.52
CACNA2D4-211ENST00000540728 VSTM1Q6UX27 236 aa18.32■□□□□ 0.52
CACNA2D4-211ENST00000540728 ZNF852Q6ZMS4 543 aa18.32■□□□□ 0.52
CACNA2D4-211ENST00000540728 INTS8Q75QN2 995 aaKnown RBP18.32■□□□□ 0.52
CACNA2D4-211ENST00000540728 MYLPFQ96A32 169 aa18.32■□□□□ 0.52
CACNA2D4-211ENST00000540728 DDX23Q9BUQ8 820 aaKnown RBP18.32■□□□□ 0.52
CACNA2D4-211ENST00000540728 BCO2Q9BYV7 579 aa18.32■□□□□ 0.52
CACNA2D4-211ENST00000540728 GTPBP4Q9BZE4 634 aaKnown RBP18.32■□□□□ 0.52
CACNA2D4-211ENST00000540728 OSBPL6Q9BZF3 934 aa18.32■□□□□ 0.52
CACNA2D4-211ENST00000540728 XYLT2Q9H1B5 865 aa18.32■□□□□ 0.52
CACNA2D4-211ENST00000540728 VRTNQ9H8Y1 702 aa18.32■□□□□ 0.52
CACNA2D4-211ENST00000540728 CRTAC1Q9NQ79 661 aa18.32■□□□□ 0.52
CACNA2D4-211ENST00000540728 TRPV5Q9NQA5 729 aa18.32■□□□□ 0.52
CACNA2D4-211ENST00000540728 OBP2AQ9NY56 170 aa18.32■□□□□ 0.52
CACNA2D4-211ENST00000540728 USP34Q70CQ2 3546 aa18.31■□□□□ 0.52
CACNA2D4-211ENST00000540728 FAM170BA6NMN3 283 aa18.31■□□□□ 0.52
CACNA2D4-211ENST00000540728 SLC38A8A6NNN8 435 aa18.31■□□□□ 0.52
CACNA2D4-211ENST00000540728 SOBPA7XYQ1 873 aa18.31■□□□□ 0.52
CACNA2D4-211ENST00000540728 A8MXQ7 604 aa18.31■□□□□ 0.52
CACNA2D4-211ENST00000540728 MAN2B1O00754 1011 aa18.31■□□□□ 0.52
CACNA2D4-211ENST00000540728 F11P03951 625 aa18.31■□□□□ 0.52
CACNA2D4-211ENST00000540728 ANXA13P27216 316 aa18.31■□□□□ 0.52
CACNA2D4-211ENST00000540728 AVPR1AP37288 418 aa18.31■□□□□ 0.52
CACNA2D4-211ENST00000540728 GRIK1P39086 918 aa18.31■□□□□ 0.52
CACNA2D4-211ENST00000540728 VAMP7P51809 220 aa18.31■□□□□ 0.52
CACNA2D4-211ENST00000540728 DLG4P78352 724 aa18.31■□□□□ 0.52
CACNA2D4-211ENST00000540728 ADAM9Q13443 819 aa18.31■□□□□ 0.52
CACNA2D4-211ENST00000540728 SGSM1Q2NKQ1 1148 aa18.31■□□□□ 0.52
CACNA2D4-211ENST00000540728 FAM186BQ8IYM0 893 aa18.31■□□□□ 0.52
CACNA2D4-211ENST00000540728 MYCBPAPQ8TBZ2 947 aa18.31■□□□□ 0.52
CACNA2D4-211ENST00000540728 CSGALNACT1Q8TDX6 532 aa18.31■□□□□ 0.52
CACNA2D4-211ENST00000540728 TAF4BQ92750 862 aa18.31■□□□□ 0.52
CACNA2D4-211ENST00000540728 NKD2Q969F2 451 aaPredicted RBP18.31■□□□□ 0.52
CACNA2D4-211ENST00000540728 TRMT2BQ96GJ1 504 aaKnown RBP18.31■□□□□ 0.52
CACNA2D4-211ENST00000540728 CEP295NLQ96MC4 621 aa18.31■□□□□ 0.52
CACNA2D4-211ENST00000540728 TIGD1Q96MW7 591 aa18.31■□□□□ 0.52
CACNA2D4-211ENST00000540728 GSDMAQ96QA5 445 aa18.31■□□□□ 0.52
CACNA2D4-211ENST00000540728 MKNK1Q9BUB5 465 aa18.31■□□□□ 0.52
CACNA2D4-211ENST00000540728 LTB4R2Q9NPC1 389 aa18.31■□□□□ 0.52
CACNA2D4-211ENST00000540728 SPATA6Q9NWH7 488 aaPredicted RBP18.31■□□□□ 0.52
CACNA2D4-211ENST00000540728 TICRRQ7Z2Z1 1910 aa18.31■□□□□ 0.52
CACNA2D4-211ENST00000540728 PRR23AA6NEV1 266 aa18.3■□□□□ 0.52
CACNA2D4-211ENST00000540728 PROB1E7EW31 1015 aa18.3■□□□□ 0.52
CACNA2D4-211ENST00000540728 CHADO15335 359 aa18.3■□□□□ 0.52
CACNA2D4-211ENST00000540728 NOL4O94818 638 aa18.3■□□□□ 0.52
CACNA2D4-211ENST00000540728 PTPN1P18031 435 aaKnown RBP18.3■□□□□ 0.52
CACNA2D4-211ENST00000540728 BDNFP23560 247 aa18.3■□□□□ 0.52
CACNA2D4-211ENST00000540728 PSMC2P35998 433 aaKnown RBP18.3■□□□□ 0.52
CACNA2D4-211ENST00000540728 CCDC142Q17RM4 750 aa18.3■□□□□ 0.52
CACNA2D4-211ENST00000540728 ZACNQ401N2 412 aa18.3■□□□□ 0.52
CACNA2D4-211ENST00000540728 ARHGAP29Q52LW3 1261 aa18.3■□□□□ 0.52
CACNA2D4-211ENST00000540728 MDH1BQ5I0G3 518 aa18.3■□□□□ 0.52
CACNA2D4-211ENST00000540728 GPIHBP1Q8IV16 184 aa18.3■□□□□ 0.52
CACNA2D4-211ENST00000540728 CMTM8Q8IZV2 173 aa18.3■□□□□ 0.52
CACNA2D4-211ENST00000540728 ENGASEQ8NFI3 743 aa18.3■□□□□ 0.52
CACNA2D4-211ENST00000540728 SMARCE1Q969G3 411 aa18.3■□□□□ 0.52
CACNA2D4-211ENST00000540728 SLC46A2Q9BY10 475 aa18.3■□□□□ 0.52
CACNA2D4-211ENST00000540728 THG1LQ9NWX6 298 aaKnown RBP18.3■□□□□ 0.52
CACNA2D4-211ENST00000540728 EHD2Q9NZN4 543 aa18.3■□□□□ 0.52
CACNA2D4-211ENST00000540728 DLGAP2Q9P1A6 1054 aa18.3■□□□□ 0.52
CACNA2D4-211ENST00000540728 MTF2Q9Y483 593 aaPredicted RBP18.3■□□□□ 0.52
CACNA2D4-211ENST00000540728 NUP210Q8TEM1 1887 aaPredicted RBP18.3■□□□□ 0.52
CACNA2D4-211ENST00000540728 MYO15AQ9UKN7 3530 aa18.3■□□□□ 0.52
CACNA2D4-211ENST00000540728 COL4A2P08572 1712 aa18.29■□□□□ 0.52
CACNA2D4-211ENST00000540728 TRIM66O15016 1216 aa18.29■□□□□ 0.52
CACNA2D4-211ENST00000540728 AKAP3O75969 853 aa18.29■□□□□ 0.52
CACNA2D4-211ENST00000540728 VNN1O95497 513 aa18.29■□□□□ 0.52
CACNA2D4-211ENST00000540728 GLULP15104 373 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms