RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 CLNKQ7Z7G1 428 aa12.91□□□□□ -0.34
NPC1-202ENST00000540608 WDTC1Q8N5D0 677 aa12.91□□□□□ -0.34
NPC1-202ENST00000540608 NSUN6Q8TEA1 469 aaKnown RBP12.91□□□□□ -0.34
NPC1-202ENST00000540608 CPT1BQ92523 772 aa12.91□□□□□ -0.34
NPC1-202ENST00000540608 CDHR1Q96JP9 859 aa12.91□□□□□ -0.34
NPC1-202ENST00000540608 IMPG2Q9BZV3 1241 aa12.91□□□□□ -0.34
NPC1-202ENST00000540608 VPS33BQ9H267 617 aa12.91□□□□□ -0.34
NPC1-202ENST00000540608 FBXO40Q9UH90 709 aa12.91□□□□□ -0.34
NPC1-202ENST00000540608 KIAA1217Q5T5P2 1943 aa12.91□□□□□ -0.34
NPC1-202ENST00000540608 PARP14Q460N5 1801 aa12.91□□□□□ -0.34
NPC1-202ENST00000540608 E7ESA3 106 aa12.91□□□□□ -0.34
NPC1-202ENST00000540608 ASS1P00966 412 aaKnown RBP12.91□□□□□ -0.34
NPC1-202ENST00000540608 CST3P01034 146 aaPredicted RBP12.91□□□□□ -0.34
NPC1-202ENST00000540608 MARK3P27448 753 aa12.91□□□□□ -0.34
NPC1-202ENST00000540608 CDC25CP30307 473 aa12.91□□□□□ -0.34
NPC1-202ENST00000540608 ARL2P36404 184 aa12.91□□□□□ -0.34
NPC1-202ENST00000540608 ABL2P42684 1182 aa12.91□□□□□ -0.34
NPC1-202ENST00000540608 EFTUD2Q15029 972 aaKnown RBP eCLIP12.91□□□□□ -0.349e-10■■■■■ 29.7
NPC1-202ENST00000540608 CMPK2Q5EBM0 449 aa12.91□□□□□ -0.34
NPC1-202ENST00000540608 ANKRD22Q5VYY1 191 aa12.91□□□□□ -0.34
NPC1-202ENST00000540608 BANPQ8N9N5 519 aa12.91□□□□□ -0.34
NPC1-202ENST00000540608 TTC13Q8NBP0 860 aa12.91□□□□□ -0.34
NPC1-202ENST00000540608 TCP10LQ8TDR4 215 aa12.91□□□□□ -0.34
NPC1-202ENST00000540608 SPDL1Q96EA4 605 aa12.91□□□□□ -0.34
NPC1-202ENST00000540608 PAFAH2Q99487 392 aa12.91□□□□□ -0.34
NPC1-202ENST00000540608 TUBB6Q9BUF5 446 aa12.91□□□□□ -0.34
NPC1-202ENST00000540608 DENND2DQ9H6A0 471 aaPredicted RBP12.91□□□□□ -0.34
NPC1-202ENST00000540608 LRRIQ4A6NIV6 560 aa12.9□□□□□ -0.34
NPC1-202ENST00000540608 LMNAP02545 664 aaKnown RBP12.9□□□□□ -0.34
NPC1-202ENST00000540608 SUPT20HL2P0C7V6 817 aa12.9□□□□□ -0.34
NPC1-202ENST00000540608 EIF4BP23588 611 aaKnown RBP12.9□□□□□ -0.34
NPC1-202ENST00000540608 BRD2P25440 801 aaKnown RBP12.9□□□□□ -0.34
NPC1-202ENST00000540608 CDH5P33151 784 aaPredicted RBP12.9□□□□□ -0.34
NPC1-202ENST00000540608 AP3M2P53677 418 aa12.9□□□□□ -0.34
NPC1-202ENST00000540608 GAD2Q05329 585 aa12.9□□□□□ -0.34
NPC1-202ENST00000540608 SUPT20HL1Q3ZLR7 823 aa12.9□□□□□ -0.34
NPC1-202ENST00000540608 SNRNP48Q6IEG0 339 aaKnown RBP12.9□□□□□ -0.34
NPC1-202ENST00000540608 CAPRIN2Q6IMN6 1127 aaKnown RBP12.9□□□□□ -0.34
NPC1-202ENST00000540608 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.9□□□□□ -0.34
NPC1-202ENST00000540608 ACTL9Q8TC94 416 aa12.9□□□□□ -0.34
NPC1-202ENST00000540608 MANSC1Q9H8J5 431 aa12.9□□□□□ -0.34
NPC1-202ENST00000540608 GINM1Q9NU53 330 aa12.9□□□□□ -0.34
NPC1-202ENST00000540608 KANSL3Q9P2N6 904 aa12.9□□□□□ -0.34
NPC1-202ENST00000540608 FZD1Q9UP38 647 aa12.9□□□□□ -0.34
NPC1-202ENST00000540608 AGTPBP1Q9UPW5 1226 aa12.9□□□□□ -0.34
NPC1-202ENST00000540608 COL11A1P12107 1806 aaPredicted RBP12.9□□□□□ -0.34
NPC1-202ENST00000540608 WDR91A4D1P6 747 aa12.9□□□□□ -0.34
NPC1-202ENST00000540608 A6NHS1 94 aa12.9□□□□□ -0.34
NPC1-202ENST00000540608 SPATA31C2B4DYI2 1134 aa12.9□□□□□ -0.34
NPC1-202ENST00000540608 SKAP2O75563 359 aaPredicted RBP12.9□□□□□ -0.34
NPC1-202ENST00000540608 TSHRP16473 764 aa12.9□□□□□ -0.34
NPC1-202ENST00000540608 RPL22P35268 128 aaKnown RBP12.9□□□□□ -0.34
NPC1-202ENST00000540608 TGFB2P61812 414 aa12.9□□□□□ -0.34
NPC1-202ENST00000540608 OTUD4Q01804 1114 aaKnown RBP12.9□□□□□ -0.34
NPC1-202ENST00000540608 TNFAIP1Q13829 316 aa12.9□□□□□ -0.34
NPC1-202ENST00000540608 NBPF12Q5TAG4 269 aaPredicted RBP12.9□□□□□ -0.34
NPC1-202ENST00000540608 GPAT2Q6NUI2 795 aa12.9□□□□□ -0.34
NPC1-202ENST00000540608 SAMD7Q7Z3H4 446 aa12.9□□□□□ -0.34
NPC1-202ENST00000540608 RHPN2Q8IUC4 686 aa12.9□□□□□ -0.34
NPC1-202ENST00000540608 PALM2Q8IXS6 379 aa12.9□□□□□ -0.34
NPC1-202ENST00000540608 FBXO36Q8NEA4 188 aa12.9□□□□□ -0.34
NPC1-202ENST00000540608 REPS2Q8NFH8 660 aa12.9□□□□□ -0.34
NPC1-202ENST00000540608 RFWD2Q8NHY2 731 aa12.9□□□□□ -0.34
NPC1-202ENST00000540608 MICAL1Q8TDZ2 1067 aa12.9□□□□□ -0.34
NPC1-202ENST00000540608 DCAKDQ8WVC6 231 aa12.9□□□□□ -0.34
NPC1-202ENST00000540608 DHX33Q9H6R0 707 aaKnown RBP12.9□□□□□ -0.34
NPC1-202ENST00000540608 SAE1Q9UBE0 346 aaPredicted RBP12.9□□□□□ -0.34
NPC1-202ENST00000540608 PCDHGC3Q9UN70 934 aa12.9□□□□□ -0.34
NPC1-202ENST00000540608 NUMBLQ9Y6R0 609 aa12.9□□□□□ -0.34
NPC1-202ENST00000540608 SMAPO00193 183 aa12.89□□□□□ -0.35
NPC1-202ENST00000540608 ATP4AP20648 1035 aa12.89□□□□□ -0.35
NPC1-202ENST00000540608 GDF10P55107 478 aa12.89□□□□□ -0.35
NPC1-202ENST00000540608 TAZQ16635 292 aa12.89□□□□□ -0.35
NPC1-202ENST00000540608 CFAP61Q8NHU2 1237 aa12.89□□□□□ -0.35
NPC1-202ENST00000540608 TTC8Q8TAM2 541 aa12.89□□□□□ -0.35
NPC1-202ENST00000540608 WDR83Q9BRX9 315 aaKnown RBP12.89□□□□□ -0.35
NPC1-202ENST00000540608 TMEM134Q9H6X4 195 aa12.89□□□□□ -0.35
NPC1-202ENST00000540608 CCDC189A1A4V9 331 aa12.89□□□□□ -0.35
NPC1-202ENST00000540608 CST8O60676 142 aa12.89□□□□□ -0.35
NPC1-202ENST00000540608 CCDC22O60826 627 aa12.89□□□□□ -0.35
NPC1-202ENST00000540608 KRT7P08729 469 aa12.89□□□□□ -0.35
NPC1-202ENST00000540608 MYH9P35579 1960 aaKnown RBP12.89□□□□□ -0.35
NPC1-202ENST00000540608 BACE1P56817 501 aa12.89□□□□□ -0.35
NPC1-202ENST00000540608 DYNLT1P63172 113 aa12.89□□□□□ -0.35
NPC1-202ENST00000540608 SLC25A11Q02978 314 aaKnown RBP12.89□□□□□ -0.35
NPC1-202ENST00000540608 SEZ6Q53EL9 994 aa12.89□□□□□ -0.35
NPC1-202ENST00000540608 BBS12Q6ZW61 710 aa12.89□□□□□ -0.35
NPC1-202ENST00000540608 RSAD2Q8WXG1 361 aa12.89□□□□□ -0.35
NPC1-202ENST00000540608 TRIM55Q9BYV6 548 aa12.89□□□□□ -0.35
NPC1-202ENST00000540608 DCLRE1BQ9H816 532 aa12.89□□□□□ -0.35
NPC1-202ENST00000540608 C10orf88Q9H8K7 445 aa12.89□□□□□ -0.35
NPC1-202ENST00000540608 CISHQ9NSE2 258 aa12.89□□□□□ -0.35
NPC1-202ENST00000540608 SLC17A7Q9P2U7 560 aa12.89□□□□□ -0.35
NPC1-202ENST00000540608 DCTN4Q9UJW0 460 aa12.89□□□□□ -0.35
NPC1-202ENST00000540608 ZNF214Q9UL59 606 aaPredicted RBP12.89□□□□□ -0.35
NPC1-202ENST00000540608 MAFBQ9Y5Q3 323 aaPredicted RBP12.89□□□□□ -0.35
NPC1-202ENST00000540608 ENTPD5O75356 428 aa12.88□□□□□ -0.35
NPC1-202ENST00000540608 STAM2O75886 525 aa12.88□□□□□ -0.35
NPC1-202ENST00000540608 EDN1P05305 212 aa12.88□□□□□ -0.35
NPC1-202ENST00000540608 ATP6V1C1P21283 382 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms