RNA–Protein interactions for RNA: ENST00000540232.5

TAF1D-221, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit D, human

TSL 3

Gene TAF1D, Length 483 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1D-221	ENST00000540232	PIH1D1	Q9NWS0	290 aa	Known RBP	4.62	□□□□□ -1.67
TAF1D-221	ENST00000540232	XPR1	Q9UBH6	696 aa		4.62	□□□□□ -1.67
TAF1D-221	ENST00000540232	SERGEF	Q9UGK8	458 aa		4.62	□□□□□ -1.67
TAF1D-221	ENST00000540232	SERTAD3	Q9UJW9	196 aa		4.62	□□□□□ -1.67
TAF1D-221	ENST00000540232	SHOC2	Q9UQ13	582 aa		4.62	□□□□□ -1.67
TAF1D-221	ENST00000540232	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
TAF1D-221	ENST00000540232	LINC01548	A6NM66	108 aa		4.61	□□□□□ -1.67
TAF1D-221	ENST00000540232	TARM1	B6A8C7	271 aa		4.61	□□□□□ -1.67
TAF1D-221	ENST00000540232	ZNF213	O14771	459 aa		4.61	□□□□□ -1.67
TAF1D-221	ENST00000540232	HNRNPC	P07910	306 aa	Known RBP eCLIP	4.61	□□□□□ -1.67	2e-7	■■□□□ 12.7
TAF1D-221	ENST00000540232	NDUFB7	P17568	137 aa		4.61	□□□□□ -1.67
TAF1D-221	ENST00000540232	LMO1	P25800	156 aa		4.61	□□□□□ -1.67
TAF1D-221	ENST00000540232	LIPA	P38571	399 aa		4.61	□□□□□ -1.67
TAF1D-221	ENST00000540232	ALDH9A1	P49189	494 aa		4.61	□□□□□ -1.67
TAF1D-221	ENST00000540232	SLC11A2	P49281	568 aa		4.61	□□□□□ -1.67
TAF1D-221	ENST00000540232	TFF2	Q03403	129 aa		4.61	□□□□□ -1.67
TAF1D-221	ENST00000540232	AARS2	Q5JTZ9	985 aa	Known RBP	4.61	□□□□□ -1.67
TAF1D-221	ENST00000540232	ARHGAP40	Q5TG30	622 aa		4.61	□□□□□ -1.67
TAF1D-221	ENST00000540232	KIAA1614	Q5VZ46	1190 aa		4.61	□□□□□ -1.67
TAF1D-221	ENST00000540232	SUMO4	Q6EEV6	95 aa		4.61	□□□□□ -1.67
TAF1D-221	ENST00000540232	CEP85	Q6P2H3	762 aa		4.61	□□□□□ -1.67
TAF1D-221	ENST00000540232	ZNF804A	Q7Z570	1209 aa		4.61	□□□□□ -1.67
TAF1D-221	ENST00000540232	SEMA6D	Q8NFY4	1073 aa		4.61	□□□□□ -1.67
TAF1D-221	ENST00000540232	KBTBD7	Q8WVZ9	684 aa		4.61	□□□□□ -1.67
TAF1D-221	ENST00000540232	ATG4A	Q8WYN0	398 aa		4.61	□□□□□ -1.67
TAF1D-221	ENST00000540232	ACO2	Q99798	780 aa	Known RBP	4.61	□□□□□ -1.67
TAF1D-221	ENST00000540232	TRIM54	Q9BYV2	358 aa		4.61	□□□□□ -1.67
TAF1D-221	ENST00000540232	DPH1	Q9BZG8	443 aa		4.61	□□□□□ -1.67
TAF1D-221	ENST00000540232	FLRT1	Q9NZU1	646 aa		4.61	□□□□□ -1.67
TAF1D-221	ENST00000540232	CPA4	Q9UI42	421 aa		4.61	□□□□□ -1.67
TAF1D-221	ENST00000540232	NDRG4	Q9ULP0	352 aa	Known RBP	4.61	□□□□□ -1.67
TAF1D-221	ENST00000540232	TMX2	Q9Y320	296 aa		4.61	□□□□□ -1.67
TAF1D-221	ENST00000540232	COL3A1	P02461	1466 aa	Predicted RBP	4.61	□□□□□ -1.67
TAF1D-221	ENST00000540232		A0A087WWL8	130 aa		4.6	□□□□□ -1.67
TAF1D-221	ENST00000540232		H0YIZ8	118 aa		4.6	□□□□□ -1.67
TAF1D-221	ENST00000540232	ERC2	O15083	957 aa		4.6	□□□□□ -1.67
TAF1D-221	ENST00000540232	FAM163B	P0C2L3	166 aa		4.6	□□□□□ -1.67
TAF1D-221	ENST00000540232	NPR1	P16066	1061 aa		4.6	□□□□□ -1.67
TAF1D-221	ENST00000540232	LRPAP1	P30533	357 aa		4.6	□□□□□ -1.67
TAF1D-221	ENST00000540232	AGFG1	P52594	562 aa	Known RBP	4.6	□□□□□ -1.67
TAF1D-221	ENST00000540232	ATXN1	P54253	815 aa	Known RBP	4.6	□□□□□ -1.67
TAF1D-221	ENST00000540232	UCP3	P55916	312 aa		4.6	□□□□□ -1.67
TAF1D-221	ENST00000540232	SP2	Q02086	613 aa		4.6	□□□□□ -1.67
TAF1D-221	ENST00000540232	SRSF4	Q08170	494 aa	Known RBP	4.6	□□□□□ -1.67
TAF1D-221	ENST00000540232	SLC10A2	Q12908	348 aa	Predicted RBP	4.6	□□□□□ -1.67
TAF1D-221	ENST00000540232	E2F2	Q14209	437 aa		4.6	□□□□□ -1.67
TAF1D-221	ENST00000540232	TREML2	Q5T2D2	321 aa		4.6	□□□□□ -1.67
TAF1D-221	ENST00000540232	RGS7BP	Q6MZT1	257 aa	Predicted RBP	4.6	□□□□□ -1.67
TAF1D-221	ENST00000540232	DAAM2	Q86T65	1068 aa		4.6	□□□□□ -1.67
TAF1D-221	ENST00000540232	PPP1R35	Q8TAP8	253 aa		4.6	□□□□□ -1.67
TAF1D-221	ENST00000540232	REPS1	Q96D71	796 aa		4.6	□□□□□ -1.67
TAF1D-221	ENST00000540232	P2RX7	Q99572	595 aa	Known RBP	4.6	□□□□□ -1.67
TAF1D-221	ENST00000540232	MESP1	Q9BRJ9	268 aa		4.6	□□□□□ -1.67
TAF1D-221	ENST00000540232	ANLN	Q9NQW6	1124 aa		4.6	□□□□□ -1.67
TAF1D-221	ENST00000540232	DLL3	Q9NYJ7	618 aa		4.6	□□□□□ -1.67
TAF1D-221	ENST00000540232	ZIM2	Q9NZV7	527 aa		4.6	□□□□□ -1.67
TAF1D-221	ENST00000540232	STAP2	Q9UGK3	403 aa		4.6	□□□□□ -1.67
TAF1D-221	ENST00000540232	DNAJC9-AS1	A6NH13	148 aa		4.59	□□□□□ -1.67
TAF1D-221	ENST00000540232	JTB	O76095	146 aa		4.59	□□□□□ -1.67
TAF1D-221	ENST00000540232	TJP3	O95049	919 aa		4.59	□□□□□ -1.67
TAF1D-221	ENST00000540232	CELA2A	P08217	269 aa		4.59	□□□□□ -1.67
TAF1D-221	ENST00000540232	XRCC6	P12956	609 aa	Known RBP eCLIP	4.59	□□□□□ -1.67	3e-9	■■■■■ 54.6
TAF1D-221	ENST00000540232	CLCN2	P51788	898 aa		4.59	□□□□□ -1.67
TAF1D-221	ENST00000540232	EEFSEC	P57772	596 aa	Known RBP	4.59	□□□□□ -1.67
TAF1D-221	ENST00000540232	GPSM2	P81274	684 aa		4.59	□□□□□ -1.67
TAF1D-221	ENST00000540232	SATB1	Q01826	763 aa		4.59	□□□□□ -1.67
TAF1D-221	ENST00000540232	HNRNPA0	Q13151	305 aa	Known RBP	4.59	□□□□□ -1.67
TAF1D-221	ENST00000540232	LLGL1	Q15334	1064 aa		4.59	□□□□□ -1.67
TAF1D-221	ENST00000540232	ANO6	Q4KMQ2	910 aa		4.59	□□□□□ -1.67
TAF1D-221	ENST00000540232	SLC29A4	Q7RTT9	530 aa		4.59	□□□□□ -1.67
TAF1D-221	ENST00000540232	GAS2L3	Q86XJ1	694 aa		4.59	□□□□□ -1.67
TAF1D-221	ENST00000540232	RP9	Q8TA86	221 aa	Known RBP	4.59	□□□□□ -1.67
TAF1D-221	ENST00000540232	LRGUK	Q96M69	825 aa		4.59	□□□□□ -1.67
TAF1D-221	ENST00000540232	NT5C1B	Q96P26	610 aa		4.59	□□□□□ -1.67
TAF1D-221	ENST00000540232	CXorf36	Q9H7Y0	433 aa		4.59	□□□□□ -1.67
TAF1D-221	ENST00000540232	GLOD4	Q9HC38	313 aa		4.59	□□□□□ -1.67
TAF1D-221	ENST00000540232	THRAP3	Q9Y2W1	955 aa	Known RBP	4.59	□□□□□ -1.67
TAF1D-221	ENST00000540232		A0A1W2PPL8	197 aa		4.58	□□□□□ -1.68
TAF1D-221	ENST00000540232	MYO1C	O00159	1063 aa		4.58	□□□□□ -1.68
TAF1D-221	ENST00000540232	PHGDH	O43175	533 aa	Known RBP	4.58	□□□□□ -1.68
TAF1D-221	ENST00000540232	TUSC2	O75896	110 aa		4.58	□□□□□ -1.68
TAF1D-221	ENST00000540232	LATS1	O95835	1130 aa		4.58	□□□□□ -1.68
TAF1D-221	ENST00000540232	FES	P07332	822 aa		4.58	□□□□□ -1.68
TAF1D-221	ENST00000540232	CSF1R	P07333	972 aa		4.58	□□□□□ -1.68
TAF1D-221	ENST00000540232	U2AF1L5	P0DN76	240 aa	Predicted RBP	4.58	□□□□□ -1.68
TAF1D-221	ENST00000540232	CYP2C18	P33260	490 aa		4.58	□□□□□ -1.68
TAF1D-221	ENST00000540232	U2AF1	Q01081	240 aa	Known RBP eCLIP	4.58	□□□□□ -1.68	3e-8	■■□□□ 13.1
TAF1D-221	ENST00000540232	MYO1E	Q12965	1108 aa		4.58	□□□□□ -1.68
TAF1D-221	ENST00000540232	PROSER3	Q2NL68	480 aa		4.58	□□□□□ -1.68
TAF1D-221	ENST00000540232	ODR4	Q5SWX8	454 aa		4.58	□□□□□ -1.68
TAF1D-221	ENST00000540232	LMBRD2	Q68DH5	695 aa	Predicted RBP	4.58	□□□□□ -1.68
TAF1D-221	ENST00000540232	CXorf57	Q6NSI4	855 aa	Known RBP	4.58	□□□□□ -1.68
TAF1D-221	ENST00000540232	OVCH2	Q7RTZ1	564 aa		4.58	□□□□□ -1.68
TAF1D-221	ENST00000540232	ZBTB34	Q8NCN2	500 aa		4.58	□□□□□ -1.68
TAF1D-221	ENST00000540232	SOCS4	Q8WXH5	440 aa		4.58	□□□□□ -1.68
TAF1D-221	ENST00000540232	GLG1	Q92896	1179 aa		4.58	□□□□□ -1.68
TAF1D-221	ENST00000540232	RUNDC1	Q96C34	613 aa		4.58	□□□□□ -1.68
TAF1D-221	ENST00000540232	FSD1L	Q9BXM9	530 aa		4.58	□□□□□ -1.68
TAF1D-221	ENST00000540232	ZMAT3	Q9HA38	289 aa	Known RBP	4.58	□□□□□ -1.68
TAF1D-221	ENST00000540232	ATP6V0A4	Q9HBG4	840 aa		4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms