RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 LAMA3Q16787 3333 aa14.36□□□□□ -0.11
BNIP3-202ENST00000540159 TOM1L1O75674 476 aa14.35□□□□□ -0.11
BNIP3-202ENST00000540159 FAM155BO75949 473 aa14.35□□□□□ -0.11
BNIP3-202ENST00000540159 TMEM63AO94886 807 aa14.35□□□□□ -0.11
BNIP3-202ENST00000540159 LDHAP00338 332 aaKnown RBP14.35□□□□□ -0.11
BNIP3-202ENST00000540159 OAS1P00973 400 aaKnown RBP14.35□□□□□ -0.11
BNIP3-202ENST00000540159 ITGB3P05106 788 aa14.35□□□□□ -0.11
BNIP3-202ENST00000540159 C12orf29Q8N999 325 aa14.35□□□□□ -0.11
BNIP3-202ENST00000540159 FBF1Q8TES7 1133 aa14.35□□□□□ -0.11
BNIP3-202ENST00000540159 MRPL4Q9BYD3 311 aaKnown RBP14.35□□□□□ -0.11
BNIP3-202ENST00000540159 CCDC134Q9H6E4 229 aa14.35□□□□□ -0.11
BNIP3-202ENST00000540159 PDGFCQ9NRA1 345 aa14.35□□□□□ -0.11
BNIP3-202ENST00000540159 NRBP2Q9NSY0 501 aa14.35□□□□□ -0.11
BNIP3-202ENST00000540159 SLC17A7Q9P2U7 560 aa14.35□□□□□ -0.11
BNIP3-202ENST00000540159 HEY1Q9Y5J3 304 aa14.35□□□□□ -0.11
BNIP3-202ENST00000540159 HMGB2P26583 209 aaKnown RBP14.35□□□□□ -0.11
BNIP3-202ENST00000540159 POTEAQ6S8J7 498 aa14.35□□□□□ -0.11
BNIP3-202ENST00000540159 TRIM72Q6ZMU5 477 aa14.35□□□□□ -0.11
BNIP3-202ENST00000540159 LRRC8CQ8TDW0 803 aa14.35□□□□□ -0.11
BNIP3-202ENST00000540159 MAGEB18Q96M61 343 aa14.35□□□□□ -0.11
BNIP3-202ENST00000540159 LPIN3Q9BQK8 851 aa14.35□□□□□ -0.11
BNIP3-202ENST00000540159 MAGEB5Q9BZ81 275 aa14.35□□□□□ -0.11
BNIP3-202ENST00000540159 SDCBP2Q9H190 292 aa14.35□□□□□ -0.11
BNIP3-202ENST00000540159 PIH1D1Q9NWS0 290 aaKnown RBP14.35□□□□□ -0.11
BNIP3-202ENST00000540159 MYO18AQ92614 2054 aaKnown RBP14.35□□□□□ -0.11
BNIP3-202ENST00000540159 H0YCG3 227 aa14.35□□□□□ -0.11
BNIP3-202ENST00000540159 M0QYV0 167 aa14.35□□□□□ -0.11
BNIP3-202ENST00000540159 DIAPH2O60879 1101 aa14.35□□□□□ -0.11
BNIP3-202ENST00000540159 SKAP2O75563 359 aaPredicted RBP14.35□□□□□ -0.11
BNIP3-202ENST00000540159 ERBB2P04626 1255 aa14.35□□□□□ -0.11
BNIP3-202ENST00000540159 IRX3P78415 501 aaPredicted RBP14.35□□□□□ -0.11
BNIP3-202ENST00000540159 CAV1Q03135 178 aa14.35□□□□□ -0.11
BNIP3-202ENST00000540159 RNASEH2BQ5TBB1 312 aaKnown RBP14.35□□□□□ -0.11
BNIP3-202ENST00000540159 SYDE1Q6ZW31 735 aaPredicted RBP14.35□□□□□ -0.11
BNIP3-202ENST00000540159 CENPUQ71F23 418 aa14.35□□□□□ -0.11
BNIP3-202ENST00000540159 IGDCC3Q8IVU1 814 aa14.35□□□□□ -0.11
BNIP3-202ENST00000540159 PALM2Q8IXS6 379 aa14.35□□□□□ -0.11
BNIP3-202ENST00000540159 ACO2Q99798 780 aaKnown RBP14.35□□□□□ -0.11
BNIP3-202ENST00000540159 HOXC10Q9NYD6 342 aa14.35□□□□□ -0.11
BNIP3-202ENST00000540159 CLUHO75153 1309 aa14.34□□□□□ -0.11
BNIP3-202ENST00000540159 NFASCO94856 1347 aa14.34□□□□□ -0.11
BNIP3-202ENST00000540159 A0A0G2JND7 137 aa14.34□□□□□ -0.11
BNIP3-202ENST00000540159 CALB1P05937 261 aa14.34□□□□□ -0.11
BNIP3-202ENST00000540159 RPL22P35268 128 aaKnown RBP14.34□□□□□ -0.11
BNIP3-202ENST00000540159 ASPAP45381 313 aa14.34□□□□□ -0.11
BNIP3-202ENST00000540159 RTP1P59025 263 aa14.34□□□□□ -0.11
BNIP3-202ENST00000540159 ZNF280AP59817 542 aaPredicted RBP14.34□□□□□ -0.11
BNIP3-202ENST00000540159 VGLL4Q14135 290 aa14.34□□□□□ -0.11
BNIP3-202ENST00000540159 OASLQ15646 514 aaKnown RBP14.34□□□□□ -0.11
BNIP3-202ENST00000540159 AMHR2Q16671 573 aa14.34□□□□□ -0.11
BNIP3-202ENST00000540159 FAM102AQ5T9C2 384 aaPredicted RBP14.34□□□□□ -0.11
BNIP3-202ENST00000540159 NSMCE1Q8WV22 266 aa14.34□□□□□ -0.11
BNIP3-202ENST00000540159 CPT1BQ92523 772 aa14.34□□□□□ -0.11
BNIP3-202ENST00000540159 WDR83Q9BRX9 315 aaKnown RBP14.34□□□□□ -0.11
BNIP3-202ENST00000540159 UBN1Q9NPG3 1134 aa14.34□□□□□ -0.11
BNIP3-202ENST00000540159 STYXL1Q9Y6J8 313 aa14.34□□□□□ -0.11
BNIP3-202ENST00000540159 HOXC6P09630 235 aa14.34□□□□□ -0.11
BNIP3-202ENST00000540159 MTFR1Q15390 333 aa14.34□□□□□ -0.11
BNIP3-202ENST00000540159 CTAGE3PQ8IX95 158 aa14.34□□□□□ -0.11
BNIP3-202ENST00000540159 SPATA18Q8TC71 538 aa14.34□□□□□ -0.11
BNIP3-202ENST00000540159 CFAP36Q96G28 342 aa14.34□□□□□ -0.11
BNIP3-202ENST00000540159 NCAPGQ9BPX3 1015 aa14.34□□□□□ -0.11
BNIP3-202ENST00000540159 CHKBQ9Y259 395 aa14.34□□□□□ -0.11
BNIP3-202ENST00000540159 POLR2AP24928 1970 aaKnown RBP14.34□□□□□ -0.11
BNIP3-202ENST00000540159 OGTO15294 1046 aa14.33□□□□□ -0.11
BNIP3-202ENST00000540159 ANP32DO95626 131 aa14.33□□□□□ -0.11
BNIP3-202ENST00000540159 ASMTLO95671 621 aa14.33□□□□□ -0.11
BNIP3-202ENST00000540159 VTNP04004 478 aa14.33□□□□□ -0.11
BNIP3-202ENST00000540159 RBP3P10745 1247 aa14.33□□□□□ -0.11
BNIP3-202ENST00000540159 YWHAGP61981 247 aaKnown RBP eCLIP14.33□□□□□ -0.11
BNIP3-202ENST00000540159 TMEM62Q0P6H9 643 aa14.33□□□□□ -0.11
BNIP3-202ENST00000540159 BNIP1Q12981 228 aa14.33□□□□□ -0.11
BNIP3-202ENST00000540159 NAA25Q14CX7 972 aa14.33□□□□□ -0.11
BNIP3-202ENST00000540159 ATF7IP2Q5U623 682 aa14.33□□□□□ -0.11
BNIP3-202ENST00000540159 XRRA1Q6P2D8 792 aa14.33□□□□□ -0.11
BNIP3-202ENST00000540159 RFX8Q6ZV50 586 aa14.33□□□□□ -0.11
BNIP3-202ENST00000540159 TTC17Q96AE7 1141 aa14.33□□□□□ -0.11
BNIP3-202ENST00000540159 CLMNQ96JQ2 1002 aa14.33□□□□□ -0.11
BNIP3-202ENST00000540159 HEXIM2Q96MH2 286 aaKnown RBP14.33□□□□□ -0.11
BNIP3-202ENST00000540159 SPATA33Q96N06 139 aa14.33□□□□□ -0.11
BNIP3-202ENST00000540159 PAFAH2Q99487 392 aa14.33□□□□□ -0.11
BNIP3-202ENST00000540159 CXCL16Q9H2A7 254 aa14.33□□□□□ -0.11
BNIP3-202ENST00000540159 ELP3Q9H9T3 547 aa14.33□□□□□ -0.11
BNIP3-202ENST00000540159 XPO7Q9UIA9 1087 aaKnown RBP14.33□□□□□ -0.11
BNIP3-202ENST00000540159 NUMBLQ9Y6R0 609 aa14.33□□□□□ -0.11
BNIP3-202ENST00000540159 MCM3APO60318 1980 aa14.33□□□□□ -0.12
BNIP3-202ENST00000540159 ARID2Q68CP9 1835 aa14.33□□□□□ -0.12
BNIP3-202ENST00000540159 MIPP30301 263 aa14.33□□□□□ -0.12
BNIP3-202ENST00000540159 EIF3EP60228 445 aaKnown RBP14.33□□□□□ -0.12
BNIP3-202ENST00000540159 SPARCL1Q14515 664 aa14.33□□□□□ -0.12
BNIP3-202ENST00000540159 PREPLQ4J6C6 727 aaPredicted RBP14.33□□□□□ -0.12
BNIP3-202ENST00000540159 PPP1R21Q6ZMI0 780 aa14.33□□□□□ -0.12
BNIP3-202ENST00000540159 BBOF1Q8ND07 529 aa14.33□□□□□ -0.12
BNIP3-202ENST00000540159 SEPT1Q8WYJ6 367 aa14.33□□□□□ -0.12
BNIP3-202ENST00000540159 RXFP1Q9HBX9 757 aa14.33□□□□□ -0.12
BNIP3-202ENST00000540159 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.33□□□□□ -0.12
BNIP3-202ENST00000540159 FAM189A1O60320 539 aa14.33□□□□□ -0.12
BNIP3-202ENST00000540159 TNNC2P02585 160 aa14.33□□□□□ -0.12
BNIP3-202ENST00000540159 MSH2P43246 934 aa14.33□□□□□ -0.12
BNIP3-202ENST00000540159 ZNF132P52740 706 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms