RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 CYP2S1Q96SQ9 504 aa21.47■■□□□ 1.03
LPCAT3-210ENST00000540090 ANK1P16157 1881 aa21.46■■□□□ 1.03
LPCAT3-210ENST00000540090 BCLAF3A2AJT9 711 aaKnown RBP21.46■■□□□ 1.03
LPCAT3-210ENST00000540090 CYP2F1P24903 491 aa21.46■■□□□ 1.03
LPCAT3-210ENST00000540090 DDIT3P35638 169 aa21.46■■□□□ 1.03
LPCAT3-210ENST00000540090 CREB5Q02930 508 aa21.46■■□□□ 1.03
LPCAT3-210ENST00000540090 EML3Q32P44 896 aa21.46■■□□□ 1.03
LPCAT3-210ENST00000540090 PSAPL1Q6NUJ1 521 aa21.46■■□□□ 1.03
LPCAT3-210ENST00000540090 POMGNT1Q8WZA1 660 aa21.46■■□□□ 1.03
LPCAT3-210ENST00000540090 ACDQ96AP0 544 aa21.46■■□□□ 1.03
LPCAT3-210ENST00000540090 SLC22A12Q96S37 553 aa21.46■■□□□ 1.03
LPCAT3-210ENST00000540090 PKMYT1Q99640 499 aa21.46■■□□□ 1.03
LPCAT3-210ENST00000540090 EDEM2Q9BV94 578 aa21.46■■□□□ 1.03
LPCAT3-210ENST00000540090 IKZF4Q9H2S9 585 aa21.46■■□□□ 1.03
LPCAT3-210ENST00000540090 TMEM206Q9H813 350 aa21.46■■□□□ 1.03
LPCAT3-210ENST00000540090 DDX43Q9NXZ2 648 aaKnown RBP21.46■■□□□ 1.03
LPCAT3-210ENST00000540090 L1RE1Q9UN81 338 aa21.46■■□□□ 1.03
LPCAT3-210ENST00000540090 FRYQ5TBA9 3013 aa21.45■■□□□ 1.02
LPCAT3-210ENST00000540090 H3BQV1 296 aa21.45■■□□□ 1.02
LPCAT3-210ENST00000540090 PROS1P07225 676 aa21.45■■□□□ 1.02
LPCAT3-210ENST00000540090 USP17L7P0C7H9 530 aa21.45■■□□□ 1.02
LPCAT3-210ENST00000540090 LONP1P36776 959 aaKnown RBP21.45■■□□□ 1.02
LPCAT3-210ENST00000540090 GRIN1Q05586 938 aa21.45■■□□□ 1.02
LPCAT3-210ENST00000540090 INTS6LQ5JSJ4 861 aaKnown RBP21.45■■□□□ 1.02
LPCAT3-210ENST00000540090 KRI1Q8N9T8 703 aaKnown RBP21.45■■□□□ 1.02
LPCAT3-210ENST00000540090 LARP4BQ92615 738 aaKnown RBP21.45■■□□□ 1.02
LPCAT3-210ENST00000540090 ATP2A3Q93084 1043 aa21.45■■□□□ 1.02
LPCAT3-210ENST00000540090 STRA6Q9BX79 667 aa21.45■■□□□ 1.02
LPCAT3-210ENST00000540090 GCNT4Q9P109 453 aa21.45■■□□□ 1.02
LPCAT3-210ENST00000540090 WNT6Q9Y6F9 365 aa21.45■■□□□ 1.02
LPCAT3-210ENST00000540090 CACNA1GO43497 2377 aa21.44■■□□□ 1.02
LPCAT3-210ENST00000540090 TRAV19A0A0A6YYK7 116 aa21.44■■□□□ 1.02
LPCAT3-210ENST00000540090 C4orf47A7E2U8 309 aa21.44■■□□□ 1.02
LPCAT3-210ENST00000540090 HUS1O60921 280 aa21.44■■□□□ 1.02
LPCAT3-210ENST00000540090 PPP1R37O75864 691 aa21.44■■□□□ 1.02
LPCAT3-210ENST00000540090 POLR2BP30876 1174 aaKnown RBP21.44■■□□□ 1.02
LPCAT3-210ENST00000540090 IFNAR2P48551 515 aa21.44■■□□□ 1.02
LPCAT3-210ENST00000540090 WNT7BP56706 349 aa21.44■■□□□ 1.02
LPCAT3-210ENST00000540090 USP4Q13107 963 aa21.44■■□□□ 1.02
LPCAT3-210ENST00000540090 NR1H3Q13133 447 aa21.44■■□□□ 1.02
LPCAT3-210ENST00000540090 TMEM86AQ8N2M4 240 aa21.44■■□□□ 1.02
LPCAT3-210ENST00000540090 C1orf127Q8N9H9 656 aa21.44■■□□□ 1.02
LPCAT3-210ENST00000540090 CCDC26Q8TAB7 109 aa21.44■■□□□ 1.02
LPCAT3-210ENST00000540090 HVCN1Q96D96 273 aa21.44■■□□□ 1.02
LPCAT3-210ENST00000540090 TRPC7Q9HCX4 862 aa21.44■■□□□ 1.02
LPCAT3-210ENST00000540090 GTF3C4Q9UKN8 822 aa21.44■■□□□ 1.02
LPCAT3-210ENST00000540090 AGAP1Q9UPQ3 857 aa21.44■■□□□ 1.02
LPCAT3-210ENST00000540090 CEP295Q9C0D2 2601 aa21.43■■□□□ 1.02
LPCAT3-210ENST00000540090 DENND4CQ5VZ89 1909 aa21.43■■□□□ 1.02
LPCAT3-210ENST00000540090 ITGB3P05106 788 aa21.43■■□□□ 1.02
LPCAT3-210ENST00000540090 CKMP06732 381 aa21.43■■□□□ 1.02
LPCAT3-210ENST00000540090 TCF3P15923 654 aa21.43■■□□□ 1.02
LPCAT3-210ENST00000540090 ACAT1P24752 427 aaKnown RBP21.43■■□□□ 1.02
LPCAT3-210ENST00000540090 NOVA1P51513 510 aaKnown RBP21.43■■□□□ 1.02
LPCAT3-210ENST00000540090 DGKEP52429 567 aa21.43■■□□□ 1.02
LPCAT3-210ENST00000540090 TFAMQ00059 246 aaKnown RBP21.43■■□□□ 1.02
LPCAT3-210ENST00000540090 MYL7Q01449 175 aa21.43■■□□□ 1.02
LPCAT3-210ENST00000540090 PSMD2Q13200 908 aa21.43■■□□□ 1.02
LPCAT3-210ENST00000540090 CFAP221Q4G0U5 840 aa21.43■■□□□ 1.02
LPCAT3-210ENST00000540090 DAB2IPQ5VWQ8 1189 aa21.43■■□□□ 1.02
LPCAT3-210ENST00000540090 C11orf74Q86VG3 221 aa21.43■■□□□ 1.02
LPCAT3-210ENST00000540090 RASSF8Q8NHQ8 419 aa21.43■■□□□ 1.02
LPCAT3-210ENST00000540090 CXorf38Q8TB03 319 aa21.43■■□□□ 1.02
LPCAT3-210ENST00000540090 SPATA18Q8TC71 538 aa21.43■■□□□ 1.02
LPCAT3-210ENST00000540090 CACTINQ8WUQ7 758 aaKnown RBP21.43■■□□□ 1.02
LPCAT3-210ENST00000540090 LINC00597Q9H2U6 94 aa21.43■■□□□ 1.02
LPCAT3-210ENST00000540090 GDAP2Q9NXN4 497 aa21.43■■□□□ 1.02
LPCAT3-210ENST00000540090 EML5Q05BV3 1969 aa21.43■■□□□ 1.02
LPCAT3-210ENST00000540090 LNP1A1A4G5 178 aa21.42■■□□□ 1.02
LPCAT3-210ENST00000540090 GABRDO14764 452 aa21.42■■□□□ 1.02
LPCAT3-210ENST00000540090 BMP15O95972 392 aa21.42■■□□□ 1.02
LPCAT3-210ENST00000540090 GJB2P29033 226 aa21.42■■□□□ 1.02
LPCAT3-210ENST00000540090 GBP1P32455 592 aa21.42■■□□□ 1.02
LPCAT3-210ENST00000540090 USP39Q53GS9 565 aaKnown RBP21.42■■□□□ 1.02
LPCAT3-210ENST00000540090 PMS2CLQ68D20 193 aa21.42■■□□□ 1.02
LPCAT3-210ENST00000540090 SCARA3Q6AZY7 606 aa21.42■■□□□ 1.02
LPCAT3-210ENST00000540090 OSTM1Q86WC4 334 aa21.42■■□□□ 1.02
LPCAT3-210ENST00000540090 SFR1Q86XK3 245 aa21.42■■□□□ 1.02
LPCAT3-210ENST00000540090 BRSK2Q8IWQ3 736 aa21.42■■□□□ 1.02
LPCAT3-210ENST00000540090 LRRC52Q8N7C0 313 aa21.42■■□□□ 1.02
LPCAT3-210ENST00000540090 ARL14EPQ8N8R7 260 aaPredicted RBP21.42■■□□□ 1.02
LPCAT3-210ENST00000540090 FSIP1Q8NA03 581 aa21.42■■□□□ 1.02
LPCAT3-210ENST00000540090 TSTD1Q8NFU3 115 aa21.42■■□□□ 1.02
LPCAT3-210ENST00000540090 SH3RF2Q8TEC5 729 aa21.42■■□□□ 1.02
LPCAT3-210ENST00000540090 USP33Q8TEY7 942 aa21.42■■□□□ 1.02
LPCAT3-210ENST00000540090 FUBP3Q96I24 572 aaKnown RBP eCLIP21.42■■□□□ 1.02
LPCAT3-210ENST00000540090 FAM213AQ9BRX8 229 aa21.42■■□□□ 1.02
LPCAT3-210ENST00000540090 GIPC1O14908 333 aa21.41■■□□□ 1.02
LPCAT3-210ENST00000540090 LHX1P48742 406 aa21.41■■□□□ 1.02
LPCAT3-210ENST00000540090 KCNA1Q09470 495 aa21.41■■□□□ 1.02
LPCAT3-210ENST00000540090 RASSF3Q86WH2 238 aa21.41■■□□□ 1.02
LPCAT3-210ENST00000540090 SPATA2LQ8IUW3 424 aaPredicted RBP21.41■■□□□ 1.02
LPCAT3-210ENST00000540090 CSGALNACT2Q8N6G5 542 aa21.41■■□□□ 1.02
LPCAT3-210ENST00000540090 TOP6BLQ8N6T0 577 aa21.41■■□□□ 1.02
LPCAT3-210ENST00000540090 TTC16Q8NEE8 873 aa21.41■■□□□ 1.02
LPCAT3-210ENST00000540090 ZSWIM2Q8NEG5 633 aa21.41■■□□□ 1.02
LPCAT3-210ENST00000540090 ARHGAP26Q9UNA1 814 aa21.41■■□□□ 1.02
LPCAT3-210ENST00000540090 EXOC7Q9UPT5 735 aa21.41■■□□□ 1.02
LPCAT3-210ENST00000540090 WASF3Q9UPY6 502 aa21.41■■□□□ 1.02
LPCAT3-210ENST00000540090 INVSQ9Y283 1065 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms