RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 ATP6V1C1P21283 382 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 RGS2P41220 211 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 MARSP56192 900 aaKnown RBP13.21□□□□□ -0.29
DDX55-206ENST00000539934 SPIRE1Q08AE8 756 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 TUBB2AQ13885 445 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 HLTFQ14527 1009 aaKnown RBP eCLIP13.21□□□□□ -0.29
DDX55-206ENST00000539934 TCEAL1Q15170 157 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 IFI16Q16666 785 aaKnown RBP13.21□□□□□ -0.29
DDX55-206ENST00000539934 SH3D19Q5HYK7 790 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 SOCS4Q8WXH5 440 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 BADQ92934 168 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 HAUS8Q9BT25 410 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 TUBB2BQ9BVA1 445 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 HOMER2Q9NSB8 354 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 HPCAL4Q9UM19 191 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 AGAP1Q9UPQ3 857 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 KCNJ18B7U540 433 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 DNM1LO00429 736 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 NFIBO00712 420 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 OR5F1O95221 314 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 PLA2G4BP0C869 781 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 PMS1P54277 932 aaKnown RBP13.21□□□□□ -0.29
DDX55-206ENST00000539934 RTP1P59025 263 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 KCNJ12Q14500 433 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 SEMA3AQ14563 771 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 MORN1Q5T089 497 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 WDR93Q6P2C0 686 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 APTXQ7Z2E3 356 aaKnown RBP13.21□□□□□ -0.29
DDX55-206ENST00000539934 PLEKHH3Q7Z736 793 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 GALNT7Q86SF2 657 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 FAM9CQ8IZT9 166 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 MRPL9Q9BYD2 267 aaKnown RBP13.21□□□□□ -0.29
DDX55-206ENST00000539934 TRIM8Q9BZR9 551 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 SNX25Q9H3E2 840 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 C8orf4Q9NR00 106 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 ADD3Q9UEY8 706 aaKnown RBP13.21□□□□□ -0.29
DDX55-206ENST00000539934 SNX5Q9Y5X3 404 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 COL11A1P12107 1806 aaPredicted RBP13.2□□□□□ -0.3
DDX55-206ENST00000539934 ANKRD34BA5PLL1 514 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 LACTBL1A8MY62 500 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 TEX33O43247 280 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 SULT1B1O43704 296 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 KATNA1O75449 491 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 GSTA1P08263 222 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 NCAM1P13591 858 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 FOSL2P15408 326 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 COL9A1P20849 921 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 CCNE1P24864 410 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 RPL9P32969 192 aaKnown RBP13.2□□□□□ -0.3
DDX55-206ENST00000539934 PPP2R2AP63151 447 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 KRT31Q15323 416 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 CEP55Q53EZ4 464 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 TCP11X2Q5H9J9 407 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 SYCP2LQ5T4T6 812 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 FAM109BQ6ICB4 259 aaPredicted RBP13.2□□□□□ -0.3
DDX55-206ENST00000539934 POTEGQ6S5H5 508 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 CATSPER4Q7RTX7 472 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 DDX42Q86XP3 938 aaKnown RBP eCLIP13.2□□□□□ -0.3
DDX55-206ENST00000539934 CATSPER3Q86XQ3 398 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 KIAA0895Q8NCT3 520 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 P2RX5Q93086 422 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 EFHD2Q96C19 240 aaPredicted RBP13.2□□□□□ -0.3
DDX55-206ENST00000539934 LIMA1Q9UHB6 759 aaKnown RBP13.2□□□□□ -0.3
DDX55-206ENST00000539934 SCOCQ9UIL1 159 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 HDAC3O15379 428 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 LGR5O75473 907 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 ASMTLO95671 621 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 S100BP04271 92 aaPredicted RBP13.2□□□□□ -0.3
DDX55-206ENST00000539934 FDX1P10109 184 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 RPA1P27694 616 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 MAPK4P31152 587 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 HSD17B4P51659 736 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 CHMP4BP1P59074 171 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 MOGQ16653 247 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 RUFY4Q6ZNE9 571 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 CEP68Q76N32 757 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 RTL10Q7L3V2 364 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 ANKRD53Q8N9V6 530 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 BBOF1Q8ND07 529 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 TRPV1Q8NER1 839 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 PGBD4Q96DM1 585 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 APBA2Q99767 749 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 FARSBQ9NSD9 589 aaKnown RBP13.2□□□□□ -0.3
DDX55-206ENST00000539934 VAV3Q9UKW4 847 aa13.2□□□□□ -0.3
DDX55-206ENST00000539934 A0A088AWK7 358 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 TTLL13PA6NNM8 815 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 TMEM114B3SHH9 223 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 ZC3H11AO75152 810 aaKnown RBP eCLIP13.19□□□□□ -0.3
DDX55-206ENST00000539934 KRT18P05783 430 aaKnown RBP13.19□□□□□ -0.3
DDX55-206ENST00000539934 ACADSP16219 412 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 ATP2A2P16615 1042 aaKnown RBP13.19□□□□□ -0.3
DDX55-206ENST00000539934 PRKACAP17612 351 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 M6PRP20645 277 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 PSMA4P25789 261 aaKnown RBP13.19□□□□□ -0.3
DDX55-206ENST00000539934 HOXA7P31268 230 aaPredicted RBP13.19□□□□□ -0.3
DDX55-206ENST00000539934 RFC5P40937 340 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 COPB1P53618 953 aaKnown RBP13.19□□□□□ -0.3
DDX55-206ENST00000539934 EPHA7Q15375 998 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 CNPY1Q3B7I2 92 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 MTERF2Q49AM1 385 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms