RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 PALB2Q86YC2 1186 aa16.38■□□□□ 0.21
DDB1-216ENST00000539739 C12orf29Q8N999 325 aa16.38■□□□□ 0.21
DDB1-216ENST00000539739 OR8K1Q8NGG5 319 aa16.38■□□□□ 0.21
DDB1-216ENST00000539739 SPPL2BQ8TCT7 592 aa16.38■□□□□ 0.21
DDB1-216ENST00000539739 SYN2Q92777 582 aaPredicted RBP16.38■□□□□ 0.21
DDB1-216ENST00000539739 MYLPFQ96A32 169 aa16.38■□□□□ 0.21
DDB1-216ENST00000539739 CYFIP2Q96F07 1278 aa16.38■□□□□ 0.21
DDB1-216ENST00000539739 CDCA3Q99618 268 aaPredicted RBP16.38■□□□□ 0.21
DDB1-216ENST00000539739 PKMYT1Q99640 499 aa16.38■□□□□ 0.21
DDB1-216ENST00000539739 NSUN3Q9H649 340 aaKnown RBP16.38■□□□□ 0.21
DDB1-216ENST00000539739 FAM49BQ9NUQ9 324 aa16.38■□□□□ 0.21
DDB1-216ENST00000539739 AIPL1Q9NZN9 384 aa16.38■□□□□ 0.21
DDB1-216ENST00000539739 AFF4Q9UHB7 1163 aaKnown RBP16.38■□□□□ 0.21
DDB1-216ENST00000539739 MAFFQ9ULX9 164 aa16.38■□□□□ 0.21
DDB1-216ENST00000539739 MYO7AQ13402 2215 aa16.38■□□□□ 0.21
DDB1-216ENST00000539739 THAP12O43422 761 aa16.37■□□□□ 0.21
DDB1-216ENST00000539739 ABLIM3O94929 683 aa16.37■□□□□ 0.21
DDB1-216ENST00000539739 GLUD1P00367 558 aa16.37■□□□□ 0.21
DDB1-216ENST00000539739 IGFBP4P22692 258 aa16.37■□□□□ 0.21
DDB1-216ENST00000539739 ASIC2Q16515 512 aa16.37■□□□□ 0.21
DDB1-216ENST00000539739 DNTTIP2Q5QJE6 756 aaKnown RBP16.37■□□□□ 0.21
DDB1-216ENST00000539739 RNF19BQ6ZMZ0 732 aa16.37■□□□□ 0.21
DDB1-216ENST00000539739 RBM23Q86U06 439 aaKnown RBP16.37■□□□□ 0.21
DDB1-216ENST00000539739 SLC47A2Q86VL8 602 aa16.37■□□□□ 0.21
DDB1-216ENST00000539739 SPC24Q8NBT2 197 aa16.37■□□□□ 0.21
DDB1-216ENST00000539739 PCED1BQ96HM7 432 aa16.37■□□□□ 0.21
DDB1-216ENST00000539739 FUBP3Q96I24 572 aaKnown RBP eCLIP16.37■□□□□ 0.21
DDB1-216ENST00000539739 PGLYRP2Q96PD5 576 aa16.37■□□□□ 0.21
DDB1-216ENST00000539739 TMLHEQ9NVH6 421 aa16.37■□□□□ 0.21
DDB1-216ENST00000539739 ZNHIT6Q9NWK9 470 aaKnown RBP16.37■□□□□ 0.21
DDB1-216ENST00000539739 ABI2Q9NYB9 513 aaPredicted RBP16.37■□□□□ 0.21
DDB1-216ENST00000539739 MTMR11A4FU01 709 aa16.37■□□□□ 0.21
DDB1-216ENST00000539739 TGM5O43548 720 aa16.37■□□□□ 0.21
DDB1-216ENST00000539739 MFAP3LO75121 409 aa16.37■□□□□ 0.21
DDB1-216ENST00000539739 CLASP2O75122 1294 aaKnown RBP16.37■□□□□ 0.21
DDB1-216ENST00000539739 ATF2P15336 505 aa16.37■□□□□ 0.21
DDB1-216ENST00000539739 CYP11B1P15538 503 aa16.37■□□□□ 0.21
DDB1-216ENST00000539739 POU3F3P20264 500 aaPredicted RBP16.37■□□□□ 0.21
DDB1-216ENST00000539739 ADCY1Q08828 1119 aa16.37■□□□□ 0.21
DDB1-216ENST00000539739 CNGA2Q16280 664 aa16.37■□□□□ 0.21
DDB1-216ENST00000539739 PPP1R26Q5T8A7 1209 aaPredicted RBP16.37■□□□□ 0.21
DDB1-216ENST00000539739 ARHGAP17Q68EM7 881 aa16.37■□□□□ 0.21
DDB1-216ENST00000539739 SLC2A14Q8TDB8 520 aa16.37■□□□□ 0.21
DDB1-216ENST00000539739 HNRNPABQ99729 332 aaKnown RBP16.37■□□□□ 0.21
DDB1-216ENST00000539739 LPIN3Q9BQK8 851 aa16.37■□□□□ 0.21
DDB1-216ENST00000539739 ABCB6Q9NP58 842 aa16.37■□□□□ 0.21
DDB1-216ENST00000539739 HESX1Q9UBX0 185 aa16.37■□□□□ 0.21
DDB1-216ENST00000539739 DPP7Q9UHL4 492 aa16.37■□□□□ 0.21
DDB1-216ENST00000539739 UQCRHLA0A096LP55 91 aa16.36■□□□□ 0.21
DDB1-216ENST00000539739 PER2O15055 1255 aa16.36■□□□□ 0.21
DDB1-216ENST00000539739 UQCRHP07919 91 aa16.36■□□□□ 0.21
DDB1-216ENST00000539739 CCDC130P13994 396 aa16.36■□□□□ 0.21
DDB1-216ENST00000539739 ADORA2BP29275 332 aa16.36■□□□□ 0.21
DDB1-216ENST00000539739 NRIP1P48552 1158 aa16.36■□□□□ 0.21
DDB1-216ENST00000539739 CLCN4P51793 760 aa16.36■□□□□ 0.21
DDB1-216ENST00000539739 ADKP55263 362 aaKnown RBP16.36■□□□□ 0.21
DDB1-216ENST00000539739 SLC8A3P57103 927 aa16.36■□□□□ 0.21
DDB1-216ENST00000539739 DUSP6Q16828 381 aa16.36■□□□□ 0.21
DDB1-216ENST00000539739 CFAP221Q4G0U5 840 aa16.36■□□□□ 0.21
DDB1-216ENST00000539739 ELMSAN1Q6PJG2 1045 aa16.36■□□□□ 0.21
DDB1-216ENST00000539739 ADGRD2Q7Z7M1 963 aa16.36■□□□□ 0.21
DDB1-216ENST00000539739 ZNF677Q86XU0 584 aa16.36■□□□□ 0.21
DDB1-216ENST00000539739 ATAD1Q8NBU5 361 aa16.36■□□□□ 0.21
DDB1-216ENST00000539739 ZNF606Q8WXB4 792 aa16.36■□□□□ 0.21
DDB1-216ENST00000539739 B3GNT5Q9BYG0 378 aa16.36■□□□□ 0.21
DDB1-216ENST00000539739 ACP6Q9NPH0 428 aa16.36■□□□□ 0.21
DDB1-216ENST00000539739 HSFX1Q9UBD0 423 aa16.36■□□□□ 0.21
DDB1-216ENST00000539739 MTCH2Q9Y6C9 303 aa16.36■□□□□ 0.21
DDB1-216ENST00000539739 BZW2Q9Y6E2 419 aaKnown RBP16.36■□□□□ 0.21
DDB1-216ENST00000539739 COL4A4P53420 1690 aaPredicted RBP16.36■□□□□ 0.21
DDB1-216ENST00000539739 BDNFP23560 247 aa16.35■□□□□ 0.21
DDB1-216ENST00000539739 TUFMP49411 452 aaKnown RBP16.35■□□□□ 0.21
DDB1-216ENST00000539739 KLHL30Q0D2K2 578 aa16.35■□□□□ 0.21
DDB1-216ENST00000539739 CCDC142Q17RM4 750 aa16.35■□□□□ 0.21
DDB1-216ENST00000539739 LILRA6Q6PI73 481 aa16.35■□□□□ 0.21
DDB1-216ENST00000539739 LCLAT1Q6UWP7 414 aa16.35■□□□□ 0.21
DDB1-216ENST00000539739 CCDC149Q6ZUS6 474 aa16.35■□□□□ 0.21
DDB1-216ENST00000539739 IRF2BP2Q7Z5L9 587 aa16.35■□□□□ 0.21
DDB1-216ENST00000539739 GPIHBP1Q8IV16 184 aa16.35■□□□□ 0.21
DDB1-216ENST00000539739 FUKQ8N0W3 1084 aa16.35■□□□□ 0.21
DDB1-216ENST00000539739 EPS8L1Q8TE68 723 aa16.35■□□□□ 0.21
DDB1-216ENST00000539739 TFAP2BQ92481 460 aa16.35■□□□□ 0.21
DDB1-216ENST00000539739 SMARCD1Q96GM5 515 aa16.35■□□□□ 0.21
DDB1-216ENST00000539739 DNAJC7Q99615 494 aa16.35■□□□□ 0.21
DDB1-216ENST00000539739 CYP4F11Q9HBI6 524 aa16.35■□□□□ 0.21
DDB1-216ENST00000539739 ABHD10Q9NUJ1 306 aa16.35■□□□□ 0.21
DDB1-216ENST00000539739 TSPAN16Q9UKR8 245 aa16.35■□□□□ 0.21
DDB1-216ENST00000539739 O00370 1275 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 CLDN5O00501 218 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 PRRG1O14668 218 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 CALCAP01258 141 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 FAM200BP0CF97 657 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 CDR1P51861 262 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 DUSP4Q13115 394 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 ADGRE1Q14246 886 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 GOLGA7BQ2TAP0 167 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 MGAT5BQ3V5L5 792 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 TCEAL5Q5H9L2 206 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 LIN9Q5TKA1 542 aa16.34■□□□□ 0.21
DDB1-216ENST00000539739 VSTM1Q6UX27 236 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms