RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 ADGRA2Q96PE1 1338 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 CNTNAP2Q9UHC6 1331 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.91□□□□□ -0.18
UBE3B-209ENST00000539584 A8MXQ7 604 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 F8VP50 259 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 IFNB1P01574 187 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 STIP1P31948 543 aaKnown RBP13.91□□□□□ -0.18
UBE3B-209ENST00000539584 VHLP40337 213 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 PTDSS1P48651 473 aaKnown RBP13.91□□□□□ -0.18
UBE3B-209ENST00000539584 ACOT2P49753 483 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 ARFIP2P53365 341 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 CDK18Q07002 472 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 KLC1Q07866 573 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 EMC2Q15006 297 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 LMBRD2Q68DH5 695 aaPredicted RBP13.91□□□□□ -0.18
UBE3B-209ENST00000539584 ZPBP2Q6X784 338 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 TRMT1LQ7Z2T5 733 aaKnown RBP13.91□□□□□ -0.18
UBE3B-209ENST00000539584 KIRREL3Q8IZU9 778 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 AGBL3Q8NEM8 1001 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 TCP10LQ8TDR4 215 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 DNAJC9Q8WXX5 260 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 TSSK1BQ9BXA7 367 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 OSBPL1AQ9BXW6 950 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 HOMER2Q9NSB8 354 aa13.91□□□□□ -0.18
UBE3B-209ENST00000539584 SIGLEC16A6NMB1 481 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 CBX6O95503 412 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 MT-ND3P03897 115 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 ETS1P14921 441 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 GM2AP17900 193 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 OCRLQ01968 901 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 SLC18A2Q05940 514 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 TFDP1Q14186 410 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 MAPK6Q16659 721 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 KRT27Q7Z3Y8 459 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 DCAKDQ8WVC6 231 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 ELMO3Q96BJ8 720 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 PTCD3Q96EY7 689 aaKnown RBP13.9□□□□□ -0.18
UBE3B-209ENST00000539584 LHX5Q9H2C1 402 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 VCXQ9H320 206 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 DHX33Q9H6R0 707 aaKnown RBP13.9□□□□□ -0.18
UBE3B-209ENST00000539584 IKBKGQ9Y6K9 419 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 PTPRJQ12913 1337 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 C3orf70A6NLC5 250 aaPredicted RBP13.9□□□□□ -0.18
UBE3B-209ENST00000539584 NPTXRO95502 500 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 ADRA1DP25100 572 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 ARL2P36404 184 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 ABL2P42684 1182 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 SOX10P56693 466 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 ACTR2P61160 394 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 CDK16Q00536 496 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 IRGCQ6NXR0 463 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 CCDC62Q6P9F0 684 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 RHPN2Q8IUC4 686 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 BRSK2Q8IWQ3 736 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.9□□□□□ -0.18
UBE3B-209ENST00000539584 FBXO36Q8NEA4 188 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 ACTL9Q8TC94 416 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 APOPT1Q96IL0 206 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 NIF3L1Q9GZT8 377 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 SYNCQ9H7C4 482 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 SPATS2LQ9NUQ6 558 aaKnown RBP13.9□□□□□ -0.18
UBE3B-209ENST00000539584 LRCH1Q9Y2L9 728 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 PPME1Q9Y570 386 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 ARID2Q68CP9 1835 aa13.9□□□□□ -0.18
UBE3B-209ENST00000539584 APOC4-APOC2K7ER74 178 aa13.89□□□□□ -0.19
UBE3B-209ENST00000539584 VWA5AO00534 786 aa13.89□□□□□ -0.19
UBE3B-209ENST00000539584 GYG2O15488 501 aa13.89□□□□□ -0.19
UBE3B-209ENST00000539584 GSC2O15499 205 aa13.89□□□□□ -0.19
UBE3B-209ENST00000539584 MED7O43513 233 aa13.89□□□□□ -0.19
UBE3B-209ENST00000539584 LPXNO60711 386 aa13.89□□□□□ -0.19
UBE3B-209ENST00000539584 APOC2P02655 101 aa13.89□□□□□ -0.19
UBE3B-209ENST00000539584 SUPT20HL2P0C7V6 817 aa13.89□□□□□ -0.19
UBE3B-209ENST00000539584 SKIP12755 728 aa13.89□□□□□ -0.19
UBE3B-209ENST00000539584 RFC5P40937 340 aa13.89□□□□□ -0.19
UBE3B-209ENST00000539584 OTUD4Q01804 1114 aaKnown RBP13.89□□□□□ -0.19
UBE3B-209ENST00000539584 BAATQ14032 418 aaPredicted RBP13.89□□□□□ -0.19
UBE3B-209ENST00000539584 MUM1Q2TAK8 710 aa13.89□□□□□ -0.19
UBE3B-209ENST00000539584 SUPT20HL1Q3ZLR7 823 aa13.89□□□□□ -0.19
UBE3B-209ENST00000539584 PLEKHG4Q58EX7 1191 aa13.89□□□□□ -0.19
UBE3B-209ENST00000539584 ANO7Q6IWH7 933 aa13.89□□□□□ -0.19
UBE3B-209ENST00000539584 CCDC60Q8IWA6 550 aaPredicted RBP13.89□□□□□ -0.19
UBE3B-209ENST00000539584 RTKN2Q8IZC4 609 aa13.89□□□□□ -0.19
UBE3B-209ENST00000539584 SLC7A3Q8WY07 619 aa13.89□□□□□ -0.19
UBE3B-209ENST00000539584 SKA1Q96BD8 255 aa13.89□□□□□ -0.19
UBE3B-209ENST00000539584 CADM1Q9BY67 442 aaKnown RBP13.89□□□□□ -0.19
UBE3B-209ENST00000539584 PNPLA8Q9NP80 782 aa13.89□□□□□ -0.19
UBE3B-209ENST00000539584 RNF146Q9NTX7 359 aa13.89□□□□□ -0.19
UBE3B-209ENST00000539584 KLHL11Q9NVR0 708 aa13.89□□□□□ -0.19
UBE3B-209ENST00000539584 MAFBQ9Y5Q3 323 aaPredicted RBP13.89□□□□□ -0.19
UBE3B-209ENST00000539584 ZNF541Q9H0D2 1346 aa13.89□□□□□ -0.19
UBE3B-209ENST00000539584 SPATA31C2B4DYI2 1134 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 NVLO15381 856 aaKnown RBP13.88□□□□□ -0.19
UBE3B-209ENST00000539584 ATG7O95352 703 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 FGFR1P11362 822 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 KDELR1P24390 212 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 SSTR1P30872 391 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 RPL22P35268 128 aaKnown RBP13.88□□□□□ -0.19
UBE3B-209ENST00000539584 ETV4P43268 484 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 WNT7BP56706 349 aa13.88□□□□□ -0.19
UBE3B-209ENST00000539584 SATB1Q01826 763 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms