RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 TMEM265A0A087WTH1 108 aa24.95■■□□□ 1.58
TMEM260-202ENST00000538838 O00370 1275 aa24.95■■□□□ 1.58
TMEM260-202ENST00000538838 CLDN5O00501 218 aa24.95■■□□□ 1.58
TMEM260-202ENST00000538838 SERPING1P05155 500 aa24.95■■□□□ 1.58
TMEM260-202ENST00000538838 MEA1Q16626 185 aa24.95■■□□□ 1.58
TMEM260-202ENST00000538838 RNF19BQ6ZMZ0 732 aa24.95■■□□□ 1.58
TMEM260-202ENST00000538838 FUKQ8N0W3 1084 aa24.95■■□□□ 1.58
TMEM260-202ENST00000538838 RHOBTB2Q9BYZ6 727 aa24.95■■□□□ 1.58
TMEM260-202ENST00000538838 MMEP08473 750 aa24.94■■□□□ 1.58
TMEM260-202ENST00000538838 CFHP08603 1231 aa24.94■■□□□ 1.58
TMEM260-202ENST00000538838 GPR17Q13304 367 aa24.94■■□□□ 1.58
TMEM260-202ENST00000538838 MAPRE1Q15691 268 aaKnown RBP24.94■■□□□ 1.58
TMEM260-202ENST00000538838 GOLGA7BQ2TAP0 167 aa24.94■■□□□ 1.58
TMEM260-202ENST00000538838 ARHGAP17Q68EM7 881 aa24.94■■□□□ 1.58
TMEM260-202ENST00000538838 FAM35AQ86V20 835 aa24.94■■□□□ 1.58
TMEM260-202ENST00000538838 KLHL5Q96PQ7 755 aa24.94■■□□□ 1.58
TMEM260-202ENST00000538838 MED10Q9BTT4 135 aa24.94■■□□□ 1.58
TMEM260-202ENST00000538838 EMILIN2Q9BXX0 1053 aa24.94■■□□□ 1.58
TMEM260-202ENST00000538838 ZNF518BQ9C0D4 1074 aa24.94■■□□□ 1.58
TMEM260-202ENST00000538838 ABI2Q9NYB9 513 aaPredicted RBP24.94■■□□□ 1.58
TMEM260-202ENST00000538838 ARHGAP20Q9P2F6 1191 aa24.94■■□□□ 1.58
TMEM260-202ENST00000538838 TSPAN16Q9UKR8 245 aa24.94■■□□□ 1.58
TMEM260-202ENST00000538838 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.94■■□□□ 1.58
TMEM260-202ENST00000538838 PATJQ8NI35 1801 aa24.94■■□□□ 1.58
TMEM260-202ENST00000538838 MTMR11A4FU01 709 aa24.94■■□□□ 1.58
TMEM260-202ENST00000538838 PDE12Q6L8Q7 609 aaKnown RBP24.94■■□□□ 1.58
TMEM260-202ENST00000538838 PAQR9Q6ZVX9 377 aa24.94■■□□□ 1.58
TMEM260-202ENST00000538838 ZNF571Q7Z3V5 609 aaPredicted RBP24.94■■□□□ 1.58
TMEM260-202ENST00000538838 CHP1Q99653 195 aa24.94■■□□□ 1.58
TMEM260-202ENST00000538838 SYT11Q9BT88 431 aa24.94■■□□□ 1.58
TMEM260-202ENST00000538838 PRDM12Q9H4Q4 367 aa24.94■■□□□ 1.58
TMEM260-202ENST00000538838 MED7O43513 233 aa24.93■■□□□ 1.58
TMEM260-202ENST00000538838 VNN2O95498 520 aa24.93■■□□□ 1.58
TMEM260-202ENST00000538838 CHRNB2P17787 502 aa24.93■■□□□ 1.58
TMEM260-202ENST00000538838 CDR2Q01850 454 aa24.93■■□□□ 1.58
TMEM260-202ENST00000538838 RAB33AQ14088 237 aa24.93■■□□□ 1.58
TMEM260-202ENST00000538838 NFE2Q16621 373 aaPredicted RBP24.93■■□□□ 1.58
TMEM260-202ENST00000538838 C4orf50Q6ZRC1 276 aa24.93■■□□□ 1.58
TMEM260-202ENST00000538838 PALB2Q86YC2 1186 aa24.93■■□□□ 1.58
TMEM260-202ENST00000538838 SPATA2LQ8IUW3 424 aaPredicted RBP24.93■■□□□ 1.58
TMEM260-202ENST00000538838 ATAD1Q8NBU5 361 aa24.93■■□□□ 1.58
TMEM260-202ENST00000538838 OLIG1Q8TAK6 271 aa24.93■■□□□ 1.58
TMEM260-202ENST00000538838 PPP1R9BQ96SB3 815 aa24.93■■□□□ 1.58
TMEM260-202ENST00000538838 HNRNPABQ99729 332 aaKnown RBP24.93■■□□□ 1.58
TMEM260-202ENST00000538838 AGPAT1Q99943 283 aa24.93■■□□□ 1.58
TMEM260-202ENST00000538838 M0QYV0 167 aa24.92■■□□□ 1.58
TMEM260-202ENST00000538838 MICAL2O94851 1124 aa24.92■■□□□ 1.58
TMEM260-202ENST00000538838 PTMAP06454 111 aaKnown RBP24.92■■□□□ 1.58
TMEM260-202ENST00000538838 ADH1AP07327 375 aa24.92■■□□□ 1.58
TMEM260-202ENST00000538838 FMO1Q01740 532 aa24.92■■□□□ 1.58
TMEM260-202ENST00000538838 CNGA2Q16280 664 aa24.92■■□□□ 1.58
TMEM260-202ENST00000538838 LCLAT1Q6UWP7 414 aa24.92■■□□□ 1.58
TMEM260-202ENST00000538838 ADGRD2Q7Z7M1 963 aa24.92■■□□□ 1.58
TMEM260-202ENST00000538838 ZNF677Q86XU0 584 aa24.92■■□□□ 1.58
TMEM260-202ENST00000538838 PASD1Q8IV76 773 aa24.92■■□□□ 1.58
TMEM260-202ENST00000538838 TTC9BQ8N6N2 239 aa24.92■■□□□ 1.58
TMEM260-202ENST00000538838 MRPL38Q96DV4 380 aaKnown RBP24.92■■□□□ 1.58
TMEM260-202ENST00000538838 KRT82Q9NSB4 513 aa24.92■■□□□ 1.58
TMEM260-202ENST00000538838 BZW2Q9Y6E2 419 aaKnown RBP24.92■■□□□ 1.58
TMEM260-202ENST00000538838 MTCL1Q9Y4B5 1905 aaKnown RBP24.91■■□□□ 1.58
TMEM260-202ENST00000538838 FECHP22830 423 aa24.91■■□□□ 1.58
TMEM260-202ENST00000538838 BDNFP23560 247 aa24.91■■□□□ 1.58
TMEM260-202ENST00000538838 KLRC2P26717 231 aa24.91■■□□□ 1.58
TMEM260-202ENST00000538838 ADCY1Q08828 1119 aa24.91■■□□□ 1.58
TMEM260-202ENST00000538838 GRIN2CQ14957 1233 aa24.91■■□□□ 1.58
TMEM260-202ENST00000538838 STILQ15468 1287 aa24.91■■□□□ 1.58
TMEM260-202ENST00000538838 ZNF697Q5TEC3 545 aa24.91■■□□□ 1.58
TMEM260-202ENST00000538838 DENND1BQ6P3S1 775 aa24.91■■□□□ 1.58
TMEM260-202ENST00000538838 TTC30AQ86WT1 665 aa24.91■■□□□ 1.58
TMEM260-202ENST00000538838 ZNF461Q8TAF7 563 aa24.91■■□□□ 1.58
TMEM260-202ENST00000538838 CRISPLD1Q9H336 500 aa24.91■■□□□ 1.58
TMEM260-202ENST00000538838 SEPT11Q9NVA2 429 aaKnown RBP24.91■■□□□ 1.58
TMEM260-202ENST00000538838 PCDHGC3Q9UN70 934 aa24.91■■□□□ 1.58
TMEM260-202ENST00000538838 PCDHB5Q9Y5E4 795 aa24.91■■□□□ 1.58
TMEM260-202ENST00000538838 FAM170AA1A519 330 aa24.9■■□□□ 1.58
TMEM260-202ENST00000538838 ABLIM3O94929 683 aa24.9■■□□□ 1.58
TMEM260-202ENST00000538838 EIF4A3P38919 411 aaKnown RBP24.9■■□□□ 1.58
TMEM260-202ENST00000538838 CACNA2D1P54289 1103 aa24.9■■□□□ 1.58
TMEM260-202ENST00000538838 PTPROQ16827 1216 aa24.9■■□□□ 1.58
TMEM260-202ENST00000538838 UBA3Q8TBC4 463 aa24.9■■□□□ 1.58
TMEM260-202ENST00000538838 PDCL3Q9H2J4 239 aa24.9■■□□□ 1.58
TMEM260-202ENST00000538838 TMEM30AQ9NV96 361 aa24.9■■□□□ 1.58
TMEM260-202ENST00000538838 HESX1Q9UBX0 185 aa24.9■■□□□ 1.58
TMEM260-202ENST00000538838 AFF4Q9UHB7 1163 aaKnown RBP24.9■■□□□ 1.58
TMEM260-202ENST00000538838 ATP8B3O60423 1300 aa24.9■■□□□ 1.58
TMEM260-202ENST00000538838 AP1G2O75843 785 aa24.9■■□□□ 1.58
TMEM260-202ENST00000538838 CYP2F1P24903 491 aa24.9■■□□□ 1.58
TMEM260-202ENST00000538838 CDK17Q00537 523 aa24.9■■□□□ 1.58
TMEM260-202ENST00000538838 SMARCB1Q12824 385 aa24.9■■□□□ 1.58
TMEM260-202ENST00000538838 CFAP221Q4G0U5 840 aa24.9■■□□□ 1.58
TMEM260-202ENST00000538838 TPGS2Q68CL5 300 aa24.9■■□□□ 1.58
TMEM260-202ENST00000538838 TMEM139Q8IV31 216 aa24.9■■□□□ 1.58
TMEM260-202ENST00000538838 SPPL2BQ8TCT7 592 aa24.9■■□□□ 1.58
TMEM260-202ENST00000538838 SMARCD1Q96GM5 515 aa24.9■■□□□ 1.58
TMEM260-202ENST00000538838 FUBP3Q96I24 572 aaKnown RBP eCLIP24.9■■□□□ 1.58
TMEM260-202ENST00000538838 FAM161BQ96MY7 647 aa24.9■■□□□ 1.58
TMEM260-202ENST00000538838 PER2O15055 1255 aa24.89■■□□□ 1.57
TMEM260-202ENST00000538838 TGM5O43548 720 aa24.89■■□□□ 1.57
TMEM260-202ENST00000538838 CLASP2O75122 1294 aaKnown RBP24.89■■□□□ 1.57
TMEM260-202ENST00000538838 FAM200BP0CF97 657 aa24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms