RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 UNC5CO95185 931 aa10.05□□□□□ -0.8
CD9-207ENST00000538418 GNAI2P04899 355 aa10.05□□□□□ -0.8
CD9-207ENST00000538418 MTHFD1P11586 935 aaKnown RBP10.05□□□□□ -0.8
CD9-207ENST00000538418 GYPEP15421 78 aa10.05□□□□□ -0.8
CD9-207ENST00000538418 ALOX15P16050 662 aaPredicted RBP10.05□□□□□ -0.8
CD9-207ENST00000538418 EGR1P18146 543 aa10.05□□□□□ -0.8
CD9-207ENST00000538418 BTF3P20290 206 aaKnown RBP10.05□□□□□ -0.8
CD9-207ENST00000538418 RAD52P43351 418 aa10.05□□□□□ -0.8
CD9-207ENST00000538418 PNLIPRP1P54315 467 aa10.05□□□□□ -0.8
CD9-207ENST00000538418 DCAF7P61962 342 aa10.05□□□□□ -0.8
CD9-207ENST00000538418 UBE3AQ05086 875 aa10.05□□□□□ -0.8
CD9-207ENST00000538418 CACNB2Q08289 660 aaPredicted RBP10.05□□□□□ -0.8
CD9-207ENST00000538418 CUL4BQ13620 913 aa10.05□□□□□ -0.8
CD9-207ENST00000538418 FAM133BQ5BKY9 247 aaKnown RBP10.05□□□□□ -0.8
CD9-207ENST00000538418 PRAMEF14Q5SWL7 426 aa10.05□□□□□ -0.8
CD9-207ENST00000538418 TSHZ3Q63HK5 1081 aa10.05□□□□□ -0.8
CD9-207ENST00000538418 ZNF572Q7Z3I7 529 aaPredicted RBP10.05□□□□□ -0.8
CD9-207ENST00000538418 OR1N1Q8NGS0 311 aa10.05□□□□□ -0.8
CD9-207ENST00000538418 GFM2Q969S9 779 aaKnown RBP10.05□□□□□ -0.8
CD9-207ENST00000538418 RSRC1Q96IZ7 334 aaKnown RBP10.05□□□□□ -0.8
CD9-207ENST00000538418 NUDT16L1Q9BRJ7 211 aaKnown RBP10.05□□□□□ -0.8
CD9-207ENST00000538418 PABPC3Q9H361 631 aaKnown RBP10.05□□□□□ -0.8
CD9-207ENST00000538418 RLIMQ9NVW2 624 aa10.05□□□□□ -0.8
CD9-207ENST00000538418 TMEM160Q9NX00 188 aa10.05□□□□□ -0.8
CD9-207ENST00000538418 ING3Q9NXR8 418 aa10.05□□□□□ -0.8
CD9-207ENST00000538418 MTO1Q9Y2Z2 717 aaKnown RBP10.05□□□□□ -0.8
CD9-207ENST00000538418 VWA7Q9Y334 891 aa10.05□□□□□ -0.8
CD9-207ENST00000538418 PLEKHM1Q9Y4G2 1056 aa10.05□□□□□ -0.8
CD9-207ENST00000538418 ASXL1Q8IXJ9 1541 aa10.05□□□□□ -0.8
CD9-207ENST00000538418 HFM1A2PYH4 1435 aa10.05□□□□□ -0.8
CD9-207ENST00000538418 NAIPQ13075 1403 aa10.05□□□□□ -0.8
CD9-207ENST00000538418 SHPRHQ149N8 1683 aa10.05□□□□□ -0.8
CD9-207ENST00000538418 MYO5BQ9ULV0 1848 aa10.05□□□□□ -0.8
CD9-207ENST00000538418 LRPPRCP42704 1394 aaKnown RBP10.04□□□□□ -0.8
CD9-207ENST00000538418 WIPF1O43516 503 aa10.04□□□□□ -0.8
CD9-207ENST00000538418 DNAJB5O75953 348 aa10.04□□□□□ -0.8
CD9-207ENST00000538418 ACTL6BO94805 426 aa10.04□□□□□ -0.8
CD9-207ENST00000538418 TGFB1P01137 390 aa10.04□□□□□ -0.8
CD9-207ENST00000538418 GJB1P08034 283 aa10.04□□□□□ -0.8
CD9-207ENST00000538418 RARBP10826 455 aa10.04□□□□□ -0.8
CD9-207ENST00000538418 GYS1P13807 737 aa10.04□□□□□ -0.8
CD9-207ENST00000538418 JUPP14923 745 aa10.04□□□□□ -0.8
CD9-207ENST00000538418 ALDH1A3P47895 512 aa10.04□□□□□ -0.8
CD9-207ENST00000538418 CLNS1AP54105 237 aaKnown RBP10.04□□□□□ -0.8
CD9-207ENST00000538418 PRKAA2P54646 552 aa10.04□□□□□ -0.8
CD9-207ENST00000538418 NAP1L1P55209 391 aaKnown RBP10.04□□□□□ -0.8
CD9-207ENST00000538418 MXRA7P84157 204 aa10.04□□□□□ -0.8
CD9-207ENST00000538418 TMTC4Q5T4D3 741 aa10.04□□□□□ -0.8
CD9-207ENST00000538418 CLEC14AQ86T13 490 aa10.04□□□□□ -0.8
CD9-207ENST00000538418 RFFLQ8WZ73 363 aa10.04□□□□□ -0.8
CD9-207ENST00000538418 HVCN1Q96D96 273 aa10.04□□□□□ -0.8
CD9-207ENST00000538418 RNF32Q9H0A6 362 aa10.04□□□□□ -0.8
CD9-207ENST00000538418 PCDHAC1Q9H158 963 aa10.04□□□□□ -0.8
CD9-207ENST00000538418 C1orf167Q5SNV9 1468 aa10.04□□□□□ -0.8
CD9-207ENST00000538418 PNPLA6Q8IY17 1366 aa10.03□□□□□ -0.8
CD9-207ENST00000538418 CCDC196A0A1B0GTZ2 297 aa10.03□□□□□ -0.8
CD9-207ENST00000538418 FSD2A1L4K1 749 aa10.03□□□□□ -0.8
CD9-207ENST00000538418 MYO1CO00159 1063 aa10.03□□□□□ -0.8
CD9-207ENST00000538418 UCP3P55916 312 aa10.03□□□□□ -0.8
CD9-207ENST00000538418 AP2B1P63010 937 aa10.03□□□□□ -0.8
CD9-207ENST00000538418 DUSP2Q05923 314 aa10.03□□□□□ -0.8
CD9-207ENST00000538418 EIF4HQ15056 248 aaKnown RBP10.03□□□□□ -0.8
CD9-207ENST00000538418 PLCL1Q15111 1095 aa10.03□□□□□ -0.8
CD9-207ENST00000538418 CRTC1Q6UUV9 634 aa10.03□□□□□ -0.8
CD9-207ENST00000538418 KRT73Q86Y46 540 aa10.03□□□□□ -0.8
CD9-207ENST00000538418 TCP11L2Q8N4U5 519 aa10.03□□□□□ -0.8
CD9-207ENST00000538418 ZNF775Q96BV0 537 aaPredicted RBP10.03□□□□□ -0.8
CD9-207ENST00000538418 SDCCAG3Q96C92 435 aa10.03□□□□□ -0.8
CD9-207ENST00000538418 DCAF5Q96JK2 942 aa10.03□□□□□ -0.8
CD9-207ENST00000538418 ZSWIM3Q96MP5 696 aa10.03□□□□□ -0.8
CD9-207ENST00000538418 COG8Q96MW5 612 aa10.03□□□□□ -0.8
CD9-207ENST00000538418 TREX2Q9BQ50 279 aaPredicted RBP10.03□□□□□ -0.8
CD9-207ENST00000538418 LSM14BQ9BX40 385 aaKnown RBP10.03□□□□□ -0.8
CD9-207ENST00000538418 PRKRIP1Q9H875 184 aaPredicted RBP10.03□□□□□ -0.8
CD9-207ENST00000538418 PRDM8Q9NQV8 689 aa10.03□□□□□ -0.8
CD9-207ENST00000538418 TRPC5Q9UL62 973 aaPredicted RBP10.03□□□□□ -0.8
CD9-207ENST00000538418 ZMYND8Q9ULU4 1186 aaPredicted RBP10.03□□□□□ -0.8
CD9-207ENST00000538418 NOL7Q9UMY1 257 aaKnown RBP10.03□□□□□ -0.8
CD9-207ENST00000538418 NPHP3Q7Z494 1330 aa10.03□□□□□ -0.8
CD9-207ENST00000538418 ATRNL1Q5VV63 1379 aa10.02□□□□□ -0.8
CD9-207ENST00000538418 XRN1Q8IZH2 1706 aaKnown RBP10.02□□□□□ -0.8
CD9-207ENST00000538418 ZBED4O75132 1171 aa10.02□□□□□ -0.81
CD9-207ENST00000538418 INMTO95050 263 aa10.02□□□□□ -0.81
CD9-207ENST00000538418 GRPP07492 148 aa10.02□□□□□ -0.81
CD9-207ENST00000538418 CCR5P51681 352 aa10.02□□□□□ -0.81
CD9-207ENST00000538418 SEC24CP53992 1094 aa10.02□□□□□ -0.81
CD9-207ENST00000538418 ATXN1P54253 815 aaKnown RBP10.02□□□□□ -0.81
CD9-207ENST00000538418 SLC12A1Q13621 1099 aa10.02□□□□□ -0.81
CD9-207ENST00000538418 AFMIDQ63HM1 303 aa10.02□□□□□ -0.81
CD9-207ENST00000538418 RAP1GAP2Q684P5 730 aa10.02□□□□□ -0.81
CD9-207ENST00000538418 GALNT5Q7Z7M9 940 aa10.02□□□□□ -0.81
CD9-207ENST00000538418 SLC44A2Q8IWA5 706 aaPredicted RBP10.02□□□□□ -0.81
CD9-207ENST00000538418 SCAMP5Q8TAC9 235 aa10.02□□□□□ -0.81
CD9-207ENST00000538418 MDM1Q8TC05 714 aa10.02□□□□□ -0.81
CD9-207ENST00000538418 CLIC6Q96NY7 704 aa10.02□□□□□ -0.81
CD9-207ENST00000538418 SYT3Q9BQG1 590 aa10.02□□□□□ -0.81
CD9-207ENST00000538418 PACSIN1Q9BY11 444 aa10.02□□□□□ -0.81
CD9-207ENST00000538418 TAF1DQ9H5J8 278 aaPredicted RBP10.02□□□□□ -0.81
CD9-207ENST00000538418 ANKRD30BQ9BXX2 1392 aa10.01□□□□□ -0.81
CD9-207ENST00000538418 SRCAPQ6ZRS2 3230 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms