RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 PCDH19Q8TAB3 1148 aa2.9□□□□□ -1.95
TNFRSF1A-210ENST00000537842 PIBF1Q8WXW3 757 aa2.9□□□□□ -1.95
TNFRSF1A-210ENST00000537842 ESR2Q92731 530 aa2.9□□□□□ -1.95
TNFRSF1A-210ENST00000537842 CLIP3Q96DZ5 547 aa2.9□□□□□ -1.95
TNFRSF1A-210ENST00000537842 TSPAN17Q96FV3 270 aa2.9□□□□□ -1.95
TNFRSF1A-210ENST00000537842 MAML3Q96JK9 1138 aa2.9□□□□□ -1.95
TNFRSF1A-210ENST00000537842 NOX5Q96PH1 765 aa2.9□□□□□ -1.95
TNFRSF1A-210ENST00000537842 DEFB118Q96PH6 123 aa2.9□□□□□ -1.95
TNFRSF1A-210ENST00000537842 AGXT2Q9BYV1 514 aa2.9□□□□□ -1.95
TNFRSF1A-210ENST00000537842 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.9□□□□□ -1.95
TNFRSF1A-210ENST00000537842 UPF3BQ9BZI7 483 aaKnown RBP2.9□□□□□ -1.95
TNFRSF1A-210ENST00000537842 INO80BQ9C086 356 aaPredicted RBP2.9□□□□□ -1.95
TNFRSF1A-210ENST00000537842 RIOX1Q9H6W3 641 aa2.9□□□□□ -1.95
TNFRSF1A-210ENST00000537842 GCM1Q9NP62 436 aa2.9□□□□□ -1.95
TNFRSF1A-210ENST00000537842 SLC6A20Q9NP91 592 aa2.9□□□□□ -1.95
TNFRSF1A-210ENST00000537842 NLRC4Q9NPP4 1024 aa2.9□□□□□ -1.95
TNFRSF1A-210ENST00000537842 PLCB1Q9NQ66 1216 aa2.9□□□□□ -1.95
TNFRSF1A-210ENST00000537842 A1CFQ9NQ94 594 aaKnown RBP2.9□□□□□ -1.95
TNFRSF1A-210ENST00000537842 PDGFCQ9NRA1 345 aa2.9□□□□□ -1.95
TNFRSF1A-210ENST00000537842 CYP39A1Q9NYL5 469 aa2.9□□□□□ -1.95
TNFRSF1A-210ENST00000537842 IP6K2Q9UHH9 426 aa2.9□□□□□ -1.95
TNFRSF1A-210ENST00000537842 CTNNA3Q9UI47 895 aa2.9□□□□□ -1.95
TNFRSF1A-210ENST00000537842 SYNPO2Q9UMS6 1093 aa2.9□□□□□ -1.95
TNFRSF1A-210ENST00000537842 LUC7L2Q9Y383 392 aaKnown RBP2.9□□□□□ -1.95
TNFRSF1A-210ENST00000537842 DAAM1Q9Y4D1 1078 aa2.9□□□□□ -1.95
TNFRSF1A-210ENST00000537842 PCDHA5Q9Y5H7 936 aa2.9□□□□□ -1.95
TNFRSF1A-210ENST00000537842 ATAD5Q96QE3 1844 aa2.9□□□□□ -1.95
TNFRSF1A-210ENST00000537842 PFASO15067 1338 aa2.9□□□□□ -1.95
TNFRSF1A-210ENST00000537842 GRIN2DO15399 1336 aa2.9□□□□□ -1.95
TNFRSF1A-210ENST00000537842 BDP1A6H8Y1 2624 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 VSTM5A8MXK1 200 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 KLRF2D3W0D1 207 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 ARVCFO00192 962 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 HRKO00198 91 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 CBX4O00257 560 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 NEMP1O14524 444 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 MEIS2O14770 477 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 SLC26A4O43511 780 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 STRNO43815 780 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 ZBED4O75132 1171 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 HIP1RO75146 1068 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 ARIH2O95376 493 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 LARGE1O95461 756 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 SGPL1O95470 568 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 CTDNEP1O95476 244 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 SLC25A27O95847 323 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 ICAM1P05362 532 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 GJB1P08034 283 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 FCER1AP12319 257 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 ALAS1P13196 640 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 CYBAP13498 195 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 RPS6KB1P23443 525 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 ITGB8P26012 769 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 PDIA3P30101 505 aaKnown RBP2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 HOXA13P31271 388 aaPredicted RBP2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 MCM5P33992 734 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 LIFRP42702 1097 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 STAT2P52630 851 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 AK2P54819 239 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 EVCP57679 992 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 RPS6P62753 249 aaKnown RBP2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 TMPRSS15P98073 1019 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 RBM10P98175 930 aaKnown RBP2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 SP2Q02086 613 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 KCTD2Q14681 263 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 GRM4Q14833 912 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 LRRC41Q15345 812 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 NPY5RQ15761 445 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 PTPN21Q16825 1174 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 CCDC96Q2M329 555 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 TMEM177Q53S58 311 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 ZNF385BQ569K4 471 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 IFIT1BQ5T764 474 aaKnown RBP2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 BTBD8Q5XKL5 378 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 VASNQ6EMK4 673 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 ABHD17CQ6PCB6 329 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 APOA5Q6Q788 366 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 SLC30A10Q6XR72 485 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 Q6ZUG5 572 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 RUFY3Q7L099 469 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 SGMS1Q86VZ5 419 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 FAM126BQ8IXS8 530 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 FAM186BQ8IYM0 893 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 ABRAQ8N0Z2 381 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 FBXL16Q8N461 479 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 CNTD1Q8N815 330 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 MB21D1Q8N884 522 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 FANCBQ8NB91 859 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 SHCBP1Q8NEM2 672 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 NCOA7Q8NI08 942 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 CYP2W1Q8TAV3 490 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 CXorf38Q8TB03 319 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 RAET1EQ8TD07 263 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 U2AF1L4Q8WU68 220 aaKnown RBP2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 CHURC1Q8WUH1 139 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 RUFY2Q8WXA3 655 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 CCT6BQ92526 530 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 COA7Q96BR5 231 aa2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 JAKMIP1Q96N16 626 aaKnown RBP2.89□□□□□ -1.95
TNFRSF1A-210ENST00000537842 TOX2Q96NM4 488 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms