RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 NLRP7Q8WX94 980 aa9.81□□□□□ -0.84
UBE3B-207ENST00000537063 SNX27Q96L92 541 aa9.81□□□□□ -0.84
UBE3B-207ENST00000537063 PTPN18Q99952 460 aa9.81□□□□□ -0.84
UBE3B-207ENST00000537063 EURLQ9NYK6 297 aa9.81□□□□□ -0.84
UBE3B-207ENST00000537063 LGALS13Q9UHV8 139 aa9.81□□□□□ -0.84
UBE3B-207ENST00000537063 A6NJR5 290 aa9.81□□□□□ -0.84
UBE3B-207ENST00000537063 DNALI1O14645 258 aaPredicted RBP9.81□□□□□ -0.84
UBE3B-207ENST00000537063 RASGRF2O14827 1237 aa9.81□□□□□ -0.84
UBE3B-207ENST00000537063 RGS16O15492 202 aaPredicted RBP9.81□□□□□ -0.84
UBE3B-207ENST00000537063 F2P00734 622 aa9.81□□□□□ -0.84
UBE3B-207ENST00000537063 KRT7P08729 469 aa9.81□□□□□ -0.84
UBE3B-207ENST00000537063 PSMA2P25787 234 aa9.81□□□□□ -0.84
UBE3B-207ENST00000537063 IL1R2P27930 398 aa9.81□□□□□ -0.84
UBE3B-207ENST00000537063 SCN1AP35498 2009 aa9.81□□□□□ -0.84
UBE3B-207ENST00000537063 GJC1P36383 396 aa9.81□□□□□ -0.84
UBE3B-207ENST00000537063 PSMC1P62191 440 aaKnown RBP9.81□□□□□ -0.84
UBE3B-207ENST00000537063 PKDCCQ504Y2 493 aa9.81□□□□□ -0.84
UBE3B-207ENST00000537063 MORN1Q5T089 497 aa9.81□□□□□ -0.84
UBE3B-207ENST00000537063 IZUMO3Q5VZ72 239 aa9.81□□□□□ -0.84
UBE3B-207ENST00000537063 BBS12Q6ZW61 710 aa9.81□□□□□ -0.84
UBE3B-207ENST00000537063 B4GALNT4Q76KP1 1039 aa9.81□□□□□ -0.84
UBE3B-207ENST00000537063 OR6J1Q8NGC5 347 aa9.81□□□□□ -0.84
UBE3B-207ENST00000537063 NPLOC4Q8TAT6 608 aa9.81□□□□□ -0.84
UBE3B-207ENST00000537063 PHACTR1Q9C0D0 580 aa9.81□□□□□ -0.84
UBE3B-207ENST00000537063 FAM107BQ9H098 131 aa9.81□□□□□ -0.84
UBE3B-207ENST00000537063 GMNCA6NCL1 334 aa9.8□□□□□ -0.84
UBE3B-207ENST00000537063 PFKMP08237 780 aa9.8□□□□□ -0.84
UBE3B-207ENST00000537063 SEC24CP53992 1094 aa9.8□□□□□ -0.84
UBE3B-207ENST00000537063 IFI35P80217 286 aaPredicted RBP9.8□□□□□ -0.84
UBE3B-207ENST00000537063 CDC42EP1Q00587 391 aa9.8□□□□□ -0.84
UBE3B-207ENST00000537063 TRIP13Q15645 432 aaPredicted RBP9.8□□□□□ -0.84
UBE3B-207ENST00000537063 ALKAL1Q6UXT8 129 aa9.8□□□□□ -0.84
UBE3B-207ENST00000537063 CYP4V2Q6ZWL3 525 aaPredicted RBP9.8□□□□□ -0.84
UBE3B-207ENST00000537063 YTHDF3Q7Z739 585 aaKnown RBP9.8□□□□□ -0.84
UBE3B-207ENST00000537063 FAM118BQ9BPY3 351 aa9.8□□□□□ -0.84
UBE3B-207ENST00000537063 METTL5Q9NRN9 209 aaKnown RBP9.8□□□□□ -0.84
UBE3B-207ENST00000537063 AGAP1Q9UPQ3 857 aa9.8□□□□□ -0.84
UBE3B-207ENST00000537063 GNEQ9Y223 722 aaKnown RBP9.8□□□□□ -0.84
UBE3B-207ENST00000537063 NDC80O14777 642 aa9.8□□□□□ -0.84
UBE3B-207ENST00000537063 ENDOD1O94919 500 aa9.8□□□□□ -0.84
UBE3B-207ENST00000537063 IGHA2P01877 340 aa9.8□□□□□ -0.84
UBE3B-207ENST00000537063 PCK1P35558 622 aa9.8□□□□□ -0.84
UBE3B-207ENST00000537063 SSR1P43307 286 aaKnown RBP9.8□□□□□ -0.84
UBE3B-207ENST00000537063 ADAM17P78536 824 aa9.8□□□□□ -0.84
UBE3B-207ENST00000537063 STILQ15468 1287 aa9.8□□□□□ -0.84
UBE3B-207ENST00000537063 ODF2Q5BJF6 829 aa9.8□□□□□ -0.84
UBE3B-207ENST00000537063 GLIS1Q8NBF1 620 aa9.8□□□□□ -0.84
UBE3B-207ENST00000537063 CMASQ8NFW8 434 aaPredicted RBP9.8□□□□□ -0.84
UBE3B-207ENST00000537063 XPO6Q96QU8 1125 aaKnown RBP9.8□□□□□ -0.84
UBE3B-207ENST00000537063 PPP1R16BQ96T49 567 aa9.8□□□□□ -0.84
UBE3B-207ENST00000537063 ADPGKQ9BRR6 497 aa9.8□□□□□ -0.84
UBE3B-207ENST00000537063 PCDH9Q9HC56 1237 aa9.8□□□□□ -0.84
UBE3B-207ENST00000537063 M0QYV0 167 aa9.8□□□□□ -0.84
UBE3B-207ENST00000537063 NDST1P52848 882 aa9.8□□□□□ -0.84
UBE3B-207ENST00000537063 ORC1Q13415 861 aa9.8□□□□□ -0.84
UBE3B-207ENST00000537063 P3H1Q32P28 736 aa9.8□□□□□ -0.84
UBE3B-207ENST00000537063 C6orf89Q6UWU4 347 aa9.8□□□□□ -0.84
UBE3B-207ENST00000537063 DPP9Q86TI2 863 aa9.8□□□□□ -0.84
UBE3B-207ENST00000537063 CCDC25Q86WR0 208 aa9.8□□□□□ -0.84
UBE3B-207ENST00000537063 KAT2BQ92831 832 aa9.8□□□□□ -0.84
UBE3B-207ENST00000537063 CNTN3Q9P232 1028 aa9.8□□□□□ -0.84
UBE3B-207ENST00000537063 SMIM35A0A1B0GVV1 85 aa9.79□□□□□ -0.84
UBE3B-207ENST00000537063 LRRD1A4D1F6 860 aa9.79□□□□□ -0.84
UBE3B-207ENST00000537063 E7EVH7 732 aa9.79□□□□□ -0.84
UBE3B-207ENST00000537063 ATF7P17544 494 aaPredicted RBP9.79□□□□□ -0.84
UBE3B-207ENST00000537063 KDELR1P24390 212 aa9.79□□□□□ -0.84
UBE3B-207ENST00000537063 ARSEP51690 589 aa9.79□□□□□ -0.84
UBE3B-207ENST00000537063 CDR1P51861 262 aa9.79□□□□□ -0.84
UBE3B-207ENST00000537063 ZNF143P52747 638 aaPredicted RBP9.79□□□□□ -0.84
UBE3B-207ENST00000537063 SLC27A1Q6PCB7 646 aa9.79□□□□□ -0.84
UBE3B-207ENST00000537063 ZNF317Q96PQ6 595 aaPredicted RBP9.79□□□□□ -0.84
UBE3B-207ENST00000537063 GBA2Q9HCG7 927 aaPredicted RBP9.79□□□□□ -0.84
UBE3B-207ENST00000537063 SHOC2Q9UQ13 582 aa9.79□□□□□ -0.84
UBE3B-207ENST00000537063 GOLGA8SH3BPF8 625 aa9.79□□□□□ -0.84
UBE3B-207ENST00000537063 DPYSL4O14531 572 aa9.79□□□□□ -0.84
UBE3B-207ENST00000537063 CHN1P15882 459 aa9.79□□□□□ -0.84
UBE3B-207ENST00000537063 MORF4L2Q15014 288 aa9.79□□□□□ -0.84
UBE3B-207ENST00000537063 HADHQ16836 314 aaKnown RBP9.79□□□□□ -0.84
UBE3B-207ENST00000537063 RNASEH2BQ5TBB1 312 aaKnown RBP9.79□□□□□ -0.84
UBE3B-207ENST00000537063 APBB1IPQ7Z5R6 666 aaPredicted RBP9.79□□□□□ -0.84
UBE3B-207ENST00000537063 LRRC52Q8N7C0 313 aa9.79□□□□□ -0.84
UBE3B-207ENST00000537063 USP6NLQ92738 828 aa9.79□□□□□ -0.84
UBE3B-207ENST00000537063 FARP1Q9Y4F1 1045 aaPredicted RBP9.79□□□□□ -0.84
UBE3B-207ENST00000537063 FAM169AQ9Y6X4 670 aa9.79□□□□□ -0.84
UBE3B-207ENST00000537063 NRCAMQ92823 1304 aa9.79□□□□□ -0.84
UBE3B-207ENST00000537063 TRPM7Q96QT4 1865 aa9.79□□□□□ -0.84
UBE3B-207ENST00000537063 C2CD4BA6NLJ0 364 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 HAS3O00219 553 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 ACSL3O95573 720 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 TRUB2O95900 331 aaKnown RBP9.78□□□□□ -0.84
UBE3B-207ENST00000537063 SMIM10L2AP0DMW4 78 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 SMIM10L2BP0DMW5 78 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 CBLBQ13191 982 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 KAZNQ674X7 775 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 TRNP1Q6NT89 227 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 EXOC3L1Q86VI1 746 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 TTC13Q8NBP0 860 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 ACSF2Q96CM8 615 aaPredicted RBP9.78□□□□□ -0.84
UBE3B-207ENST00000537063 KIF12Q96FN5 646 aa9.78□□□□□ -0.84
UBE3B-207ENST00000537063 ZMAT2Q96NC0 199 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms