RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 ITIH5Q86UX2 942 aa17.52■□□□□ 0.4
ATL3-202ENST00000535789 ZC3H3Q8IXZ2 948 aaKnown RBP17.52■□□□□ 0.4
ATL3-202ENST00000535789 FAM200AQ8TCP9 573 aa17.52■□□□□ 0.4
ATL3-202ENST00000535789 GPT2Q8TD30 523 aa17.52■□□□□ 0.4
ATL3-202ENST00000535789 PCED1BQ96HM7 432 aa17.52■□□□□ 0.4
ATL3-202ENST00000535789 PHOX2BQ99453 314 aa17.52■□□□□ 0.4
ATL3-202ENST00000535789 DDX23Q9BUQ8 820 aaKnown RBP17.52■□□□□ 0.4
ATL3-202ENST00000535789 FOXQ1Q9C009 403 aa17.52■□□□□ 0.4
ATL3-202ENST00000535789 KCNH6Q9H252 994 aa17.52■□□□□ 0.4
ATL3-202ENST00000535789 MFSD1Q9H3U5 465 aa17.52■□□□□ 0.4
ATL3-202ENST00000535789 NXF1Q9UBU9 619 aaKnown RBP17.52■□□□□ 0.4
ATL3-202ENST00000535789 HMGXB4Q9UGU5 601 aa17.52■□□□□ 0.4
ATL3-202ENST00000535789 CDH9Q9ULB4 789 aa17.52■□□□□ 0.4
ATL3-202ENST00000535789 GOLGA6L4A6NEF3 574 aa17.51■□□□□ 0.39
ATL3-202ENST00000535789 NOL4O94818 638 aa17.51■□□□□ 0.39
ATL3-202ENST00000535789 F11P03951 625 aa17.51■□□□□ 0.39
ATL3-202ENST00000535789 GLULP15104 373 aa17.51■□□□□ 0.39
ATL3-202ENST00000535789 CD44P16070 742 aaKnown RBP17.51■□□□□ 0.39
ATL3-202ENST00000535789 ATICP31939 592 aa17.51■□□□□ 0.39
ATL3-202ENST00000535789 ASPAP45381 313 aa17.51■□□□□ 0.39
ATL3-202ENST00000535789 CLCN5P51795 746 aa17.51■□□□□ 0.39
ATL3-202ENST00000535789 TNNC1P63316 161 aa17.51■□□□□ 0.39
ATL3-202ENST00000535789 TRPC3Q13507 836 aa17.51■□□□□ 0.39
ATL3-202ENST00000535789 EDRF1Q3B7T1 1238 aa17.51■□□□□ 0.39
ATL3-202ENST00000535789 MDH1BQ5I0G3 518 aa17.51■□□□□ 0.39
ATL3-202ENST00000535789 RIN3Q8TB24 985 aa17.51■□□□□ 0.39
ATL3-202ENST00000535789 SYAP1Q96A49 352 aaPredicted RBP17.51■□□□□ 0.39
ATL3-202ENST00000535789 FUBP3Q96I24 572 aaKnown RBP eCLIP17.51■□□□□ 0.39
ATL3-202ENST00000535789 GSDMAQ96QA5 445 aa17.51■□□□□ 0.39
ATL3-202ENST00000535789 ATXN3LQ9H3M9 355 aa17.51■□□□□ 0.39
ATL3-202ENST00000535789 APOBEC3GQ9HC16 384 aaKnown RBP17.51■□□□□ 0.39
ATL3-202ENST00000535789 ZFP14Q9HCL3 533 aa17.51■□□□□ 0.39
ATL3-202ENST00000535789 DLGAP2Q9P1A6 1054 aa17.51■□□□□ 0.39
ATL3-202ENST00000535789 MAN1B1Q9UKM7 699 aa17.51■□□□□ 0.39
ATL3-202ENST00000535789 MYOFQ9NZM1 2061 aa17.51■□□□□ 0.39
ATL3-202ENST00000535789 SLC38A8A6NNN8 435 aa17.5■□□□□ 0.39
ATL3-202ENST00000535789 HEPACAM2A8MVW5 462 aa17.5■□□□□ 0.39
ATL3-202ENST00000535789 KIF20AO95235 890 aa17.5■□□□□ 0.39
ATL3-202ENST00000535789 ASS1P00966 412 aaKnown RBP17.5■□□□□ 0.39
ATL3-202ENST00000535789 HLA-DRAP01903 254 aa17.5■□□□□ 0.39
ATL3-202ENST00000535789 MAGEA11P43364 429 aa17.5■□□□□ 0.39
ATL3-202ENST00000535789 VAMP7P51809 220 aa17.5■□□□□ 0.39
ATL3-202ENST00000535789 AP3M2P53677 418 aa17.5■□□□□ 0.39
ATL3-202ENST00000535789 NLRP12P59046 1061 aa17.5■□□□□ 0.39
ATL3-202ENST00000535789 STARD6P59095 220 aa17.5■□□□□ 0.39
ATL3-202ENST00000535789 VEPH1Q14D04 833 aa17.5■□□□□ 0.39
ATL3-202ENST00000535789 MLF2Q15773 248 aaPredicted RBP17.5■□□□□ 0.39
ATL3-202ENST00000535789 GPR158Q5T848 1215 aa17.5■□□□□ 0.39
ATL3-202ENST00000535789 SPATA2LQ8IUW3 424 aaPredicted RBP17.5■□□□□ 0.39
ATL3-202ENST00000535789 FAM186BQ8IYM0 893 aa17.5■□□□□ 0.39
ATL3-202ENST00000535789 MYCBPAPQ8TBZ2 947 aa17.5■□□□□ 0.39
ATL3-202ENST00000535789 TAS1R2Q8TE23 839 aa17.5■□□□□ 0.39
ATL3-202ENST00000535789 SLC46A2Q9BY10 475 aa17.5■□□□□ 0.39
ATL3-202ENST00000535789 SMG9Q9H0W8 520 aaKnown RBP17.5■□□□□ 0.39
ATL3-202ENST00000535789 SLITRK6Q9H5Y7 841 aa17.5■□□□□ 0.39
ATL3-202ENST00000535789 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.5■□□□□ 0.39
ATL3-202ENST00000535789 FRMD4BQ9Y2L6 1034 aa17.5■□□□□ 0.39
ATL3-202ENST00000535789 R3HCC1Q9Y3T6 440 aaKnown RBP17.5■□□□□ 0.39
ATL3-202ENST00000535789 MTF2Q9Y483 593 aaPredicted RBP17.5■□□□□ 0.39
ATL3-202ENST00000535789 ATG2BQ96BY7 2078 aa17.49■□□□□ 0.39
ATL3-202ENST00000535789 GALR2O43603 387 aaPredicted RBP17.49■□□□□ 0.39
ATL3-202ENST00000535789 PHACTR2O75167 634 aa17.49■□□□□ 0.39
ATL3-202ENST00000535789 CD72P21854 359 aa17.49■□□□□ 0.39
ATL3-202ENST00000535789 BDNFP23560 247 aa17.49■□□□□ 0.39
ATL3-202ENST00000535789 GNL1P36915 607 aaPredicted RBP17.49■□□□□ 0.39
ATL3-202ENST00000535789 GCLMP48507 274 aa17.49■□□□□ 0.39
ATL3-202ENST00000535789 USP46P62068 366 aa17.49■□□□□ 0.39
ATL3-202ENST00000535789 ORC1Q13415 861 aa17.49■□□□□ 0.39
ATL3-202ENST00000535789 ADAM9Q13443 819 aa17.49■□□□□ 0.39
ATL3-202ENST00000535789 ZNF667Q5HYK9 610 aa17.49■□□□□ 0.39
ATL3-202ENST00000535789 ISM2Q6H9L7 571 aa17.49■□□□□ 0.39
ATL3-202ENST00000535789 PHLDB3Q6NSJ2 640 aa17.49■□□□□ 0.39
ATL3-202ENST00000535789 INTS8Q75QN2 995 aaKnown RBP17.49■□□□□ 0.39
ATL3-202ENST00000535789 ARID3BQ8IVW6 561 aaPredicted RBP17.49■□□□□ 0.39
ATL3-202ENST00000535789 CCDC105Q8IYK2 499 aa17.49■□□□□ 0.39
ATL3-202ENST00000535789 ADSSL1Q8N142 457 aa17.49■□□□□ 0.39
ATL3-202ENST00000535789 OR6B3Q8NGW1 331 aa17.49■□□□□ 0.39
ATL3-202ENST00000535789 SMARCE1Q969G3 411 aa17.49■□□□□ 0.39
ATL3-202ENST00000535789 FAM122AQ96E09 287 aa17.49■□□□□ 0.39
ATL3-202ENST00000535789 TRMT2BQ96GJ1 504 aaKnown RBP17.49■□□□□ 0.39
ATL3-202ENST00000535789 MYRFLQ96LU7 910 aa17.49■□□□□ 0.39
ATL3-202ENST00000535789 B3GNT5Q9BYG0 378 aa17.49■□□□□ 0.39
ATL3-202ENST00000535789 ZNF518BQ9C0D4 1074 aa17.49■□□□□ 0.39
ATL3-202ENST00000535789 HEBP1Q9NRV9 189 aa17.49■□□□□ 0.39
ATL3-202ENST00000535789 RMND1Q9NWS8 449 aa17.49■□□□□ 0.39
ATL3-202ENST00000535789 MAGED2Q9UNF1 606 aaPredicted RBP17.49■□□□□ 0.39
ATL3-202ENST00000535789 FRYLO94915 3013 aa17.49■□□□□ 0.39
ATL3-202ENST00000535789 PIEZO1Q92508 2521 aa17.48■□□□□ 0.39
ATL3-202ENST00000535789 CLDN5O00501 218 aa17.48■□□□□ 0.39
ATL3-202ENST00000535789 IKBKBO14920 756 aa17.48■□□□□ 0.39
ATL3-202ENST00000535789 MBD3O95983 291 aa17.48■□□□□ 0.39
ATL3-202ENST00000535789 PSMC3P17980 439 aa17.48■□□□□ 0.39
ATL3-202ENST00000535789 CDC25CP30307 473 aa17.48■□□□□ 0.39
ATL3-202ENST00000535789 GDI1P31150 447 aa17.48■□□□□ 0.39
ATL3-202ENST00000535789 PSMC2P35998 433 aaKnown RBP17.48■□□□□ 0.39
ATL3-202ENST00000535789 PIK3CAP42336 1068 aa17.48■□□□□ 0.39
ATL3-202ENST00000535789 CYP27A1Q02318 531 aa17.48■□□□□ 0.39
ATL3-202ENST00000535789 FCHO2Q0JRZ9 810 aa17.48■□□□□ 0.39
ATL3-202ENST00000535789 SLC44A4Q53GD3 710 aa17.48■□□□□ 0.39
ATL3-202ENST00000535789 ANKRD40Q6AI12 368 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms