RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 CHRM1P11229 460 aaPredicted RBP12.05□□□□□ -0.48
CLSTN3-206ENST00000535668 PCSK1P29120 753 aa12.05□□□□□ -0.48
CLSTN3-206ENST00000535668 PMLP29590 882 aa12.05□□□□□ -0.48
CLSTN3-206ENST00000535668 GJA4P35212 333 aa12.05□□□□□ -0.48
CLSTN3-206ENST00000535668 PPP3CCP48454 512 aa12.05□□□□□ -0.48
CLSTN3-206ENST00000535668 PDE6CP51160 858 aa12.05□□□□□ -0.48
CLSTN3-206ENST00000535668 RBP5P82980 135 aa12.05□□□□□ -0.48
CLSTN3-206ENST00000535668 CYP4F8P98187 520 aa12.05□□□□□ -0.48
CLSTN3-206ENST00000535668 MAPRE1Q15691 268 aaKnown RBP12.05□□□□□ -0.48
CLSTN3-206ENST00000535668 PRR23BQ6ZRT6 265 aa12.05□□□□□ -0.48
CLSTN3-206ENST00000535668 USP49Q70CQ1 688 aa12.05□□□□□ -0.48
CLSTN3-206ENST00000535668 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.05□□□□□ -0.48
CLSTN3-206ENST00000535668 C11orf74Q86VG3 221 aa12.05□□□□□ -0.48
CLSTN3-206ENST00000535668 SFR1Q86XK3 245 aa12.05□□□□□ -0.48
CLSTN3-206ENST00000535668 RIN3Q8TB24 985 aa12.05□□□□□ -0.48
CLSTN3-206ENST00000535668 EPSTI1Q96J88 318 aa12.05□□□□□ -0.48
CLSTN3-206ENST00000535668 ECT2Q9H8V3 914 aa12.05□□□□□ -0.48
CLSTN3-206ENST00000535668 SIX4Q9UIU6 781 aa12.05□□□□□ -0.48
CLSTN3-206ENST00000535668 ARHGAP26Q9UNA1 814 aa12.05□□□□□ -0.48
CLSTN3-206ENST00000535668 ANAPC1Q9H1A4 1944 aa12.05□□□□□ -0.48
CLSTN3-206ENST00000535668 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 HUS1O60921 280 aa12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 STAU1O95793 577 aaKnown RBP12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 USP17L7P0C7H9 530 aa12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 GALK1P51570 392 aa12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 WNT7BP56706 349 aa12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 SNRPFP62306 86 aaKnown RBP12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 NOP14P78316 857 aaKnown RBP12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 MYL7Q01449 175 aa12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 KCNA1Q09470 495 aa12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 BFSP1Q12934 665 aa12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 SURF1Q15526 300 aa12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 TAF12Q16514 161 aa12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 SOWAHAQ2M3V2 549 aa12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 EML3Q32P44 896 aa12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 HSF5Q4G112 596 aaPredicted RBP12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 PPM1JQ5JR12 505 aa12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 TXNDC8Q6A555 127 aa12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 PKN3Q6P5Z2 889 aa12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 CCDC73Q6ZRK6 1079 aa12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 SV2BQ7L1I2 683 aa12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 RASSF3Q86WH2 238 aa12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 MAB21L3Q8N8X9 362 aa12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 EZH1Q92800 747 aaPredicted RBP12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 ATP2A3Q93084 1043 aa12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 FAM212AQ96EL1 285 aa12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 P2RY13Q9BPV8 354 aa12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 MRPL44Q9H9J2 332 aaKnown RBP12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 KIAA1586Q9HCI6 787 aa12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 FBRSL1Q9HCM7 1045 aaKnown RBP12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 VPS45Q9NRW7 570 aa12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 INTS13Q9NVM9 706 aa12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 DDX43Q9NXZ2 648 aaKnown RBP12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 ABI2Q9NYB9 513 aaPredicted RBP12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 EHD2Q9NZN4 543 aa12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 EML5Q05BV3 1969 aa12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 ATRXP46100 2492 aa12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 PCNX2A6NKB5 2137 aa12.04□□□□□ -0.48
CLSTN3-206ENST00000535668 TCHHQ07283 1943 aa12.03□□□□□ -0.48
CLSTN3-206ENST00000535668 GON4LQ3T8J9 2241 aa12.03□□□□□ -0.48
CLSTN3-206ENST00000535668 ZZEF1O43149 2961 aa12.03□□□□□ -0.48
CLSTN3-206ENST00000535668 TACC1O75410 805 aa12.03□□□□□ -0.48
CLSTN3-206ENST00000535668 ITGB3P05106 788 aa12.03□□□□□ -0.48
CLSTN3-206ENST00000535668 POLR2BP30876 1174 aaKnown RBP12.03□□□□□ -0.48
CLSTN3-206ENST00000535668 EIF2DP41214 584 aaKnown RBP12.03□□□□□ -0.48
CLSTN3-206ENST00000535668 SLC7A9P82251 487 aa12.03□□□□□ -0.48
CLSTN3-206ENST00000535668 SRSF5Q13243 272 aaKnown RBP12.03□□□□□ -0.48
CLSTN3-206ENST00000535668 MTF1Q14872 753 aa12.03□□□□□ -0.48
CLSTN3-206ENST00000535668 SLC39A14Q15043 492 aa12.03□□□□□ -0.48
CLSTN3-206ENST00000535668 PLK5Q496M5 336 aa12.03□□□□□ -0.48
CLSTN3-206ENST00000535668 CC2D1AQ6P1N0 951 aaPredicted RBP12.03□□□□□ -0.48
CLSTN3-206ENST00000535668 C4orf50Q6ZRC1 276 aa12.03□□□□□ -0.48
CLSTN3-206ENST00000535668 CPA6Q8N4T0 437 aa12.03□□□□□ -0.48
CLSTN3-206ENST00000535668 FSIP1Q8NA03 581 aa12.03□□□□□ -0.48
CLSTN3-206ENST00000535668 KBTBD7Q8WVZ9 684 aa12.03□□□□□ -0.48
CLSTN3-206ENST00000535668 ACDQ96AP0 544 aa12.03□□□□□ -0.48
CLSTN3-206ENST00000535668 INTS4Q96HW7 963 aaKnown RBP12.03□□□□□ -0.48
CLSTN3-206ENST00000535668 LSM14BQ9BX40 385 aaKnown RBP12.03□□□□□ -0.48
CLSTN3-206ENST00000535668 DUSP15Q9H1R2 295 aaPredicted RBP12.03□□□□□ -0.48
CLSTN3-206ENST00000535668 EBF3Q9H4W6 596 aa12.03□□□□□ -0.48
CLSTN3-206ENST00000535668 RBAKQ9NYW8 714 aaPredicted RBP12.03□□□□□ -0.48
CLSTN3-206ENST00000535668 CDH9Q9ULB4 789 aa12.03□□□□□ -0.48
CLSTN3-206ENST00000535668 AGAP1Q9UPQ3 857 aa12.03□□□□□ -0.48
CLSTN3-206ENST00000535668 PKD1L2Q7Z442 2459 aa12.03□□□□□ -0.48
CLSTN3-206ENST00000535668 PTPRDP23468 1912 aa12.03□□□□□ -0.48
CLSTN3-206ENST00000535668 ZNF638Q14966 1978 aaKnown RBP12.03□□□□□ -0.48
CLSTN3-206ENST00000535668 TRAV19A0A0A6YYK7 116 aa12.02□□□□□ -0.49
CLSTN3-206ENST00000535668 GDF9O60383 454 aa12.02□□□□□ -0.49
CLSTN3-206ENST00000535668 RNF40O75150 1001 aa12.02□□□□□ -0.49
CLSTN3-206ENST00000535668 PRPF40AO75400 957 aaKnown RBP12.02□□□□□ -0.49
CLSTN3-206ENST00000535668 WARSP23381 471 aaKnown RBP12.02□□□□□ -0.49
CLSTN3-206ENST00000535668 CYP2F1P24903 491 aa12.02□□□□□ -0.49
CLSTN3-206ENST00000535668 CASP5P51878 434 aa12.02□□□□□ -0.49
CLSTN3-206ENST00000535668 NR1H3Q13133 447 aa12.02□□□□□ -0.49
CLSTN3-206ENST00000535668 DHX8Q14562 1220 aaKnown RBP12.02□□□□□ -0.49
CLSTN3-206ENST00000535668 LPAL2Q16609 132 aa12.02□□□□□ -0.49
CLSTN3-206ENST00000535668 GAB4Q2WGN9 574 aa12.02□□□□□ -0.49
CLSTN3-206ENST00000535668 SPDYCQ5MJ68 293 aa12.02□□□□□ -0.49
CLSTN3-206ENST00000535668 SNX30Q5VWJ9 437 aa12.02□□□□□ -0.49
CLSTN3-206ENST00000535668 RRAGBQ5VZM2 374 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms