RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 SPEM2Q0P670 501 aa14.18□□□□□ -0.14
CLSTN3-205ENST00000535452 ZNF268Q14587 947 aaPredicted RBP14.18□□□□□ -0.14
CLSTN3-205ENST00000535452 MTF1Q14872 753 aa14.18□□□□□ -0.14
CLSTN3-205ENST00000535452 DDR2Q16832 855 aa14.18□□□□□ -0.14
CLSTN3-205ENST00000535452 CFAP221Q4G0U5 840 aa14.18□□□□□ -0.14
CLSTN3-205ENST00000535452 FAM26FQ5R3K3 315 aa14.18□□□□□ -0.14
CLSTN3-205ENST00000535452 TXNDC8Q6A555 127 aa14.18□□□□□ -0.14
CLSTN3-205ENST00000535452 LRRTM3Q86VH5 581 aa14.18□□□□□ -0.14
CLSTN3-205ENST00000535452 NETO1Q8TDF5 533 aa14.18□□□□□ -0.14
CLSTN3-205ENST00000535452 DDX1Q92499 740 aaKnown RBP14.18□□□□□ -0.14
CLSTN3-205ENST00000535452 CCDC47Q96A33 483 aaKnown RBP14.18□□□□□ -0.14
CLSTN3-205ENST00000535452 ACDQ96AP0 544 aa14.18□□□□□ -0.14
CLSTN3-205ENST00000535452 TRMT2BQ96GJ1 504 aaKnown RBP14.18□□□□□ -0.14
CLSTN3-205ENST00000535452 SYT15Q9BQS2 421 aa14.18□□□□□ -0.14
CLSTN3-205ENST00000535452 SMG9Q9H0W8 520 aaKnown RBP14.18□□□□□ -0.14
CLSTN3-205ENST00000535452 EBF3Q9H4W6 596 aa14.18□□□□□ -0.14
CLSTN3-205ENST00000535452 RBM12Q9NTZ6 932 aaKnown RBP14.18□□□□□ -0.14
CLSTN3-205ENST00000535452 INTS13Q9NVM9 706 aa14.18□□□□□ -0.14
CLSTN3-205ENST00000535452 DUS2Q9NX74 493 aaKnown RBP14.18□□□□□ -0.14
CLSTN3-205ENST00000535452 HSPBP1Q9NZL4 362 aa14.18□□□□□ -0.14
CLSTN3-205ENST00000535452 TRPM5Q9NZQ8 1165 aa14.18□□□□□ -0.14
CLSTN3-205ENST00000535452 CGNQ9P2M7 1197 aaKnown RBP14.18□□□□□ -0.14
CLSTN3-205ENST00000535452 CFAP45Q9UL16 551 aa14.18□□□□□ -0.14
CLSTN3-205ENST00000535452 L1RE1Q9UN81 338 aa14.18□□□□□ -0.14
CLSTN3-205ENST00000535452 MTMR6Q9Y217 621 aa14.18□□□□□ -0.14
CLSTN3-205ENST00000535452 TICRRQ7Z2Z1 1910 aa14.17□□□□□ -0.14
CLSTN3-205ENST00000535452 FRMD3A2A2Y4 597 aa14.17□□□□□ -0.14
CLSTN3-205ENST00000535452 YEATS4O95619 227 aa14.17□□□□□ -0.14
CLSTN3-205ENST00000535452 NFATC1O95644 943 aa14.17□□□□□ -0.14
CLSTN3-205ENST00000535452 ABL1P00519 1130 aa14.17□□□□□ -0.14
CLSTN3-205ENST00000535452 P4HA1P13674 534 aa14.17□□□□□ -0.14
CLSTN3-205ENST00000535452 PFKLP17858 780 aa14.17□□□□□ -0.14
CLSTN3-205ENST00000535452 CYP2F1P24903 491 aa14.17□□□□□ -0.14
CLSTN3-205ENST00000535452 ME1P48163 572 aa14.17□□□□□ -0.14
CLSTN3-205ENST00000535452 TNK2Q07912 1038 aa14.17□□□□□ -0.14
CLSTN3-205ENST00000535452 FZD5Q13467 585 aa14.17□□□□□ -0.14
CLSTN3-205ENST00000535452 IL31Q6EBC2 164 aa14.17□□□□□ -0.14
CLSTN3-205ENST00000535452 OR6B3Q8NGW1 331 aa14.17□□□□□ -0.14
CLSTN3-205ENST00000535452 RSPRY1Q96DX4 576 aa14.17□□□□□ -0.14
CLSTN3-205ENST00000535452 SLITRK1Q96PX8 696 aa14.17□□□□□ -0.14
CLSTN3-205ENST00000535452 P2RY13Q9BPV8 354 aa14.17□□□□□ -0.14
CLSTN3-205ENST00000535452 STRA6Q9BX79 667 aa14.17□□□□□ -0.14
CLSTN3-205ENST00000535452 IL21Q9HBE4 155 aa14.17□□□□□ -0.14
CLSTN3-205ENST00000535452 DLL3Q9NYJ7 618 aa14.17□□□□□ -0.14
CLSTN3-205ENST00000535452 PATJQ8NI35 1801 aa14.17□□□□□ -0.14
CLSTN3-205ENST00000535452 TCHHQ07283 1943 aa14.17□□□□□ -0.14
CLSTN3-205ENST00000535452 USP34Q70CQ2 3546 aa14.16□□□□□ -0.14
CLSTN3-205ENST00000535452 SLC9A3R1O14745 358 aaPredicted RBP14.16□□□□□ -0.14
CLSTN3-205ENST00000535452 NOL4O94818 638 aa14.16□□□□□ -0.14
CLSTN3-205ENST00000535452 F11P03951 625 aa14.16□□□□□ -0.14
CLSTN3-205ENST00000535452 HDCP19113 662 aa14.16□□□□□ -0.14
CLSTN3-205ENST00000535452 KCNA4P22459 653 aa14.16□□□□□ -0.14
CLSTN3-205ENST00000535452 GNL1P36915 607 aaPredicted RBP14.16□□□□□ -0.14
CLSTN3-205ENST00000535452 MAGEA11P43364 429 aa14.16□□□□□ -0.14
CLSTN3-205ENST00000535452 CASP5P51878 434 aa14.16□□□□□ -0.14
CLSTN3-205ENST00000535452 BIRC3Q13489 604 aa14.16□□□□□ -0.14
CLSTN3-205ENST00000535452 CCINQ13939 588 aa14.16□□□□□ -0.14
CLSTN3-205ENST00000535452 SNRNP35Q16560 246 aaKnown RBP14.16□□□□□ -0.14
CLSTN3-205ENST00000535452 AASDHQ4L235 1098 aaPredicted RBP14.16□□□□□ -0.14
CLSTN3-205ENST00000535452 TDRD10Q5VZ19 366 aaKnown RBP14.16□□□□□ -0.14
CLSTN3-205ENST00000535452 POTEHQ6S545 545 aa14.16□□□□□ -0.14
CLSTN3-205ENST00000535452 DENND5BQ6ZUT9 1274 aa14.16□□□□□ -0.14
CLSTN3-205ENST00000535452 NUDT18Q6ZVK8 323 aa14.16□□□□□ -0.14
CLSTN3-205ENST00000535452 CACNA2D4Q7Z3S7 1137 aa14.16□□□□□ -0.14
CLSTN3-205ENST00000535452 CAMKK1Q8N5S9 505 aa14.16□□□□□ -0.14
CLSTN3-205ENST00000535452 XXYLT1Q8NBI6 393 aa14.16□□□□□ -0.14
CLSTN3-205ENST00000535452 RDH13Q8NBN7 331 aa14.16□□□□□ -0.14
CLSTN3-205ENST00000535452 LINC00301Q8NCQ3 95 aa14.16□□□□□ -0.14
CLSTN3-205ENST00000535452 STKLD1Q8NE28 680 aa14.16□□□□□ -0.14
CLSTN3-205ENST00000535452 OSCP1Q8WVF1 389 aa14.16□□□□□ -0.14
CLSTN3-205ENST00000535452 USP13Q92995 863 aaPredicted RBP14.16□□□□□ -0.14
CLSTN3-205ENST00000535452 SYAP1Q96A49 352 aaPredicted RBP14.16□□□□□ -0.14
CLSTN3-205ENST00000535452 CCDC127Q96BQ5 260 aa14.16□□□□□ -0.14
CLSTN3-205ENST00000535452 CCDC34Q96HJ3 373 aa14.16□□□□□ -0.14
CLSTN3-205ENST00000535452 MKNK1Q9BUB5 465 aa14.16□□□□□ -0.14
CLSTN3-205ENST00000535452 TRIM9Q9C026 710 aa14.16□□□□□ -0.14
CLSTN3-205ENST00000535452 CACNA1IQ9P0X4 2223 aa14.15□□□□□ -0.14
CLSTN3-205ENST00000535452 CCDC163A0A0D9SF12 145 aa14.15□□□□□ -0.14
CLSTN3-205ENST00000535452 TRDMT1O14717 391 aaKnown RBP14.15□□□□□ -0.14
CLSTN3-205ENST00000535452 EXOC3O60645 756 aa14.15□□□□□ -0.14
CLSTN3-205ENST00000535452 RPP40O75818 363 aaKnown RBP14.15□□□□□ -0.14
CLSTN3-205ENST00000535452 KIF20AO95235 890 aa14.15□□□□□ -0.14
CLSTN3-205ENST00000535452 PDGFRBP09619 1106 aa14.15□□□□□ -0.14
CLSTN3-205ENST00000535452 HOXA6P31267 233 aa14.15□□□□□ -0.14
CLSTN3-205ENST00000535452 CYP2J2P51589 502 aa14.15□□□□□ -0.14
CLSTN3-205ENST00000535452 AP3M2P53677 418 aa14.15□□□□□ -0.14
CLSTN3-205ENST00000535452 ELF2Q15723 593 aa14.15□□□□□ -0.14
CLSTN3-205ENST00000535452 PREPLQ4J6C6 727 aaPredicted RBP14.15□□□□□ -0.14
CLSTN3-205ENST00000535452 SDHAF4Q5VUM1 108 aa14.15□□□□□ -0.14
CLSTN3-205ENST00000535452 LMBRD2Q68DH5 695 aaPredicted RBP14.15□□□□□ -0.14
CLSTN3-205ENST00000535452 ATL3Q6DD88 541 aa14.15□□□□□ -0.14
CLSTN3-205ENST00000535452 TXNDC11Q6PKC3 985 aa14.15□□□□□ -0.14
CLSTN3-205ENST00000535452 Q6ZS52 159 aa14.15□□□□□ -0.14
CLSTN3-205ENST00000535452 C11orf74Q86VG3 221 aa14.15□□□□□ -0.14
CLSTN3-205ENST00000535452 WDR5BQ86VZ2 330 aa14.15□□□□□ -0.14
CLSTN3-205ENST00000535452 DDX42Q86XP3 938 aaKnown RBP eCLIP14.15□□□□□ -0.14
CLSTN3-205ENST00000535452 ZNF687Q8N1G0 1237 aa14.15□□□□□ -0.14
CLSTN3-205ENST00000535452 CD101Q93033 1021 aa14.15□□□□□ -0.14
CLSTN3-205ENST00000535452 MYLPFQ96A32 169 aa14.15□□□□□ -0.14
CLSTN3-205ENST00000535452 MYRFLQ96LU7 910 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms