RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 SDHAF4Q5VUM1 108 aa24.21■■□□□ 1.47
SFSWAP-204ENST00000535399 C11orf57Q6ZUT1 292 aaPredicted RBP24.21■■□□□ 1.47
SFSWAP-204ENST00000535399 PDZD4Q76G19 769 aaPredicted RBP24.21■■□□□ 1.47
SFSWAP-204ENST00000535399 ACOT1Q86TX2 421 aa24.21■■□□□ 1.47
SFSWAP-204ENST00000535399 ITIH5Q86UX2 942 aa24.21■■□□□ 1.47
SFSWAP-204ENST00000535399 CREBRFQ8IUR6 639 aa24.21■■□□□ 1.47
SFSWAP-204ENST00000535399 CRYBG2Q8N1P7 616 aa24.21■■□□□ 1.47
SFSWAP-204ENST00000535399 LEMD2Q8NC56 503 aa24.21■■□□□ 1.47
SFSWAP-204ENST00000535399 GPR152Q8TDT2 470 aa24.21■■□□□ 1.47
SFSWAP-204ENST00000535399 WHAMMQ8TF30 809 aa24.21■■□□□ 1.47
SFSWAP-204ENST00000535399 FGF13Q92913 245 aa24.21■■□□□ 1.47
SFSWAP-204ENST00000535399 TNIP3Q96KP6 325 aa24.21■■□□□ 1.47
SFSWAP-204ENST00000535399 TWNKQ96RR1 684 aa24.21■■□□□ 1.47
SFSWAP-204ENST00000535399 ARID3AQ99856 593 aa24.21■■□□□ 1.47
SFSWAP-204ENST00000535399 B3GNT5Q9BYG0 378 aa24.21■■□□□ 1.47
SFSWAP-204ENST00000535399 ZNF334Q9HCZ1 680 aaPredicted RBP24.21■■□□□ 1.47
SFSWAP-204ENST00000535399 NOTCH4Q99466 2003 aa24.21■■□□□ 1.47
SFSWAP-204ENST00000535399 ZNF197O14709 1029 aa24.2■■□□□ 1.46
SFSWAP-204ENST00000535399 CILPO75339 1184 aa24.2■■□□□ 1.46
SFSWAP-204ENST00000535399 MICAL2O94851 1124 aa24.2■■□□□ 1.46
SFSWAP-204ENST00000535399 LAMP2P13473 410 aa24.2■■□□□ 1.46
SFSWAP-204ENST00000535399 CEBPBP17676 345 aa24.2■■□□□ 1.46
SFSWAP-204ENST00000535399 CD58P19256 250 aa24.2■■□□□ 1.46
SFSWAP-204ENST00000535399 BDNFP23560 247 aa24.2■■□□□ 1.46
SFSWAP-204ENST00000535399 RPL10AP62906 217 aaKnown RBP24.2■■□□□ 1.46
SFSWAP-204ENST00000535399 VEPH1Q14D04 833 aa24.2■■□□□ 1.46
SFSWAP-204ENST00000535399 POTEHQ6S545 545 aa24.2■■□□□ 1.46
SFSWAP-204ENST00000535399 VSTM1Q6UX27 236 aa24.2■■□□□ 1.46
SFSWAP-204ENST00000535399 NPAS3Q8IXF0 933 aa24.2■■□□□ 1.46
SFSWAP-204ENST00000535399 FAM200AQ8TCP9 573 aa24.2■■□□□ 1.46
SFSWAP-204ENST00000535399 ING5Q8WYH8 240 aa24.2■■□□□ 1.46
SFSWAP-204ENST00000535399 MUTYHQ9UIF7 546 aa24.2■■□□□ 1.46
SFSWAP-204ENST00000535399 CLDN5O00501 218 aa24.19■■□□□ 1.46
SFSWAP-204ENST00000535399 MYL4P12829 197 aa24.19■■□□□ 1.46
SFSWAP-204ENST00000535399 PTMSP20962 102 aa24.19■■□□□ 1.46
SFSWAP-204ENST00000535399 TYRO3Q06418 890 aa24.19■■□□□ 1.46
SFSWAP-204ENST00000535399 CETN1Q12798 172 aa24.19■■□□□ 1.46
SFSWAP-204ENST00000535399 LRMPQ12912 555 aa24.19■■□□□ 1.46
SFSWAP-204ENST00000535399 CUL2Q13617 745 aa24.19■■□□□ 1.46
SFSWAP-204ENST00000535399 FAM114A1Q8IWE2 563 aa24.19■■□□□ 1.46
SFSWAP-204ENST00000535399 ZNF518BQ9C0D4 1074 aa24.19■■□□□ 1.46
SFSWAP-204ENST00000535399 ELOVL4Q9GZR5 314 aa24.19■■□□□ 1.46
SFSWAP-204ENST00000535399 CISHQ9NSE2 258 aa24.19■■□□□ 1.46
SFSWAP-204ENST00000535399 SAMSN1Q9NSI8 373 aaKnown RBP24.19■■□□□ 1.46
SFSWAP-204ENST00000535399 NFE2L3Q9Y4A8 694 aa24.19■■□□□ 1.46
SFSWAP-204ENST00000535399 ZFP37Q9Y6Q3 630 aaPredicted RBP24.19■■□□□ 1.46
SFSWAP-204ENST00000535399 HMGA1P17096 107 aaKnown RBP24.18■■□□□ 1.46
SFSWAP-204ENST00000535399 MTIF2P46199 727 aaKnown RBP24.18■■□□□ 1.46
SFSWAP-204ENST00000535399 PAQR9Q6ZVX9 377 aa24.18■■□□□ 1.46
SFSWAP-204ENST00000535399 SCN4BQ8IWT1 228 aa24.18■■□□□ 1.46
SFSWAP-204ENST00000535399 EHBP1Q8NDI1 1231 aa24.18■■□□□ 1.46
SFSWAP-204ENST00000535399 STKLD1Q8NE28 680 aa24.18■■□□□ 1.46
SFSWAP-204ENST00000535399 SHKBP1Q8TBC3 707 aa24.18■■□□□ 1.46
SFSWAP-204ENST00000535399 NT5C1BQ96P26 610 aa24.18■■□□□ 1.46
SFSWAP-204ENST00000535399 NT5C1AQ9BXI3 368 aa24.18■■□□□ 1.46
SFSWAP-204ENST00000535399 FAM124BQ9H5Z6 455 aaPredicted RBP24.18■■□□□ 1.46
SFSWAP-204ENST00000535399 IL21Q9HBE4 155 aa24.18■■□□□ 1.46
SFSWAP-204ENST00000535399 TMEM30AQ9NV96 361 aa24.18■■□□□ 1.46
SFSWAP-204ENST00000535399 ASGR2P07307 311 aa24.17■■□□□ 1.46
SFSWAP-204ENST00000535399 GJA1P17302 382 aa24.17■■□□□ 1.46
SFSWAP-204ENST00000535399 CACNA2D1P54289 1103 aa24.17■■□□□ 1.46
SFSWAP-204ENST00000535399 MTMR3Q13615 1198 aa24.17■■□□□ 1.46
SFSWAP-204ENST00000535399 HSP90AA4PQ58FG1 418 aa24.17■■□□□ 1.46
SFSWAP-204ENST00000535399 GAREM2Q75VX8 874 aa24.17■■□□□ 1.46
SFSWAP-204ENST00000535399 FAM35AQ86V20 835 aa24.17■■□□□ 1.46
SFSWAP-204ENST00000535399 FUKQ8N0W3 1084 aa24.17■■□□□ 1.46
SFSWAP-204ENST00000535399 TTC39CQ8N584 583 aa24.17■■□□□ 1.46
SFSWAP-204ENST00000535399 SPATA17Q96L03 361 aa24.17■■□□□ 1.46
SFSWAP-204ENST00000535399 INTS2Q9H0H0 1204 aaKnown RBP24.17■■□□□ 1.46
SFSWAP-204ENST00000535399 DOCK8Q8NF50 2099 aa24.16■■□□□ 1.46
SFSWAP-204ENST00000535399 SLC38A8A6NNN8 435 aa24.16■■□□□ 1.46
SFSWAP-204ENST00000535399 ANHXE9PGG2 379 aa24.16■■□□□ 1.46
SFSWAP-204ENST00000535399 PI4K2BG5E9Z4 385 aa24.16■■□□□ 1.46
SFSWAP-204ENST00000535399 DCXO43602 365 aa24.16■■□□□ 1.46
SFSWAP-204ENST00000535399 NOL4O94818 638 aa24.16■■□□□ 1.46
SFSWAP-204ENST00000535399 CSH1P0DML2 217 aa24.16■■□□□ 1.46
SFSWAP-204ENST00000535399 CSH2P0DML3 217 aa24.16■■□□□ 1.46
SFSWAP-204ENST00000535399 GRIK1P39086 918 aa24.16■■□□□ 1.46
SFSWAP-204ENST00000535399 MAN2A1Q16706 1144 aa24.16■■□□□ 1.46
SFSWAP-204ENST00000535399 PTPN21Q16825 1174 aa24.16■■□□□ 1.46
SFSWAP-204ENST00000535399 UBR7Q8N806 425 aa24.16■■□□□ 1.46
SFSWAP-204ENST00000535399 C12orf29Q8N999 325 aa24.16■■□□□ 1.46
SFSWAP-204ENST00000535399 MCRS1Q96EZ8 462 aa24.16■■□□□ 1.46
SFSWAP-204ENST00000535399 C8orf48Q96LL4 319 aa24.16■■□□□ 1.46
SFSWAP-204ENST00000535399 KCNK12Q9HB15 430 aa24.16■■□□□ 1.46
SFSWAP-204ENST00000535399 GDE1Q9NZC3 331 aa24.16■■□□□ 1.46
SFSWAP-204ENST00000535399 A0A1W2PRU2 124 aa24.15■■□□□ 1.46
SFSWAP-204ENST00000535399 KCNJ18B7U540 433 aa24.15■■□□□ 1.46
SFSWAP-204ENST00000535399 F8VP50 259 aa24.15■■□□□ 1.46
SFSWAP-204ENST00000535399 TRIM66O15016 1216 aa24.15■■□□□ 1.46
SFSWAP-204ENST00000535399 FGF19O95750 216 aa24.15■■□□□ 1.46
SFSWAP-204ENST00000535399 CCDC130P13994 396 aa24.15■■□□□ 1.46
SFSWAP-204ENST00000535399 TBXAS1P24557 533 aaPredicted RBP24.15■■□□□ 1.46
SFSWAP-204ENST00000535399 GABRR2P28476 465 aa24.15■■□□□ 1.46
SFSWAP-204ENST00000535399 HTR4Q13639 388 aa24.15■■□□□ 1.46
SFSWAP-204ENST00000535399 KCNJ12Q14500 433 aa24.15■■□□□ 1.46
SFSWAP-204ENST00000535399 TEAD2Q15562 447 aa24.15■■□□□ 1.46
SFSWAP-204ENST00000535399 TAF12Q16514 161 aa24.15■■□□□ 1.46
SFSWAP-204ENST00000535399 CDKAL1Q5VV42 579 aa24.15■■□□□ 1.46
SFSWAP-204ENST00000535399 ARHGEF19Q8IW93 802 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms