RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 SEMA4GQ9NTN9 838 aa6.35□□□□□ -1.39
PRKDC-205ENST00000535375 ZSCAN32Q9NX65 697 aa6.35□□□□□ -1.39
PRKDC-205ENST00000535375 COX11Q9Y6N1 276 aa6.35□□□□□ -1.39
PRKDC-205ENST00000535375 GCOM1H8Y6P7 765 aaPredicted RBP6.34□□□□□ -1.39
PRKDC-205ENST00000535375 TLR5O60602 858 aa6.34□□□□□ -1.39
PRKDC-205ENST00000535375 IGLV2-14P01704 120 aa6.34□□□□□ -1.39
PRKDC-205ENST00000535375 NDUFB7P17568 137 aa6.34□□□□□ -1.39
PRKDC-205ENST00000535375 CD38P28907 300 aa6.34□□□□□ -1.39
PRKDC-205ENST00000535375 LRPAP1P30533 357 aa6.34□□□□□ -1.39
PRKDC-205ENST00000535375 GFOD2Q3B7J2 385 aa6.34□□□□□ -1.39
PRKDC-205ENST00000535375 MGAT5BQ3V5L5 792 aa6.34□□□□□ -1.39
PRKDC-205ENST00000535375 RGS7BPQ6MZT1 257 aaPredicted RBP6.34□□□□□ -1.39
PRKDC-205ENST00000535375 DTX2Q86UW9 622 aa6.34□□□□□ -1.39
PRKDC-205ENST00000535375 FAM109AQ8N4B1 249 aa6.34□□□□□ -1.39
PRKDC-205ENST00000535375 ZNF384Q8TF68 577 aa6.34□□□□□ -1.39
PRKDC-205ENST00000535375 SUCLG2Q96I99 432 aa6.34□□□□□ -1.39
PRKDC-205ENST00000535375 TPCN1Q9ULQ1 816 aa6.34□□□□□ -1.39
PRKDC-205ENST00000535375 ENTPD2Q9Y5L3 495 aa6.34□□□□□ -1.39
PRKDC-205ENST00000535375 SLC16A3O15427 465 aaKnown RBP6.33□□□□□ -1.4
PRKDC-205ENST00000535375 C1RP00736 705 aa6.33□□□□□ -1.4
PRKDC-205ENST00000535375 PDHA1P08559 390 aa6.33□□□□□ -1.4
PRKDC-205ENST00000535375 EBLN1P0CF75 366 aa6.33□□□□□ -1.4
PRKDC-205ENST00000535375 SOX10P56693 466 aa6.33□□□□□ -1.4
PRKDC-205ENST00000535375 WNT3P56703 355 aa6.33□□□□□ -1.4
PRKDC-205ENST00000535375 KRT17Q04695 432 aa6.33□□□□□ -1.4
PRKDC-205ENST00000535375 SLC13A2Q13183 592 aa6.33□□□□□ -1.4
PRKDC-205ENST00000535375 CTBP1Q13363 440 aa6.33□□□□□ -1.4
PRKDC-205ENST00000535375 RAB32Q13637 225 aa6.33□□□□□ -1.4
PRKDC-205ENST00000535375 ZNF618Q5T7W0 954 aa6.33□□□□□ -1.4
PRKDC-205ENST00000535375 ZNF551Q7Z340 670 aaPredicted RBP6.33□□□□□ -1.4
PRKDC-205ENST00000535375 KIAA0319LQ8IZA0 1049 aa6.33□□□□□ -1.4
PRKDC-205ENST00000535375 IL31RAQ8NI17 732 aa6.33□□□□□ -1.4
PRKDC-205ENST00000535375 RFKQ969G6 155 aa6.33□□□□□ -1.4
PRKDC-205ENST00000535375 BBC3Q96PG8 261 aaPredicted RBP6.33□□□□□ -1.4
PRKDC-205ENST00000535375 TIMP4Q99727 224 aa6.33□□□□□ -1.4
PRKDC-205ENST00000535375 METTL14Q9HCE5 456 aaKnown RBP6.33□□□□□ -1.4
PRKDC-205ENST00000535375 ARHGEF3Q9NR81 526 aa6.33□□□□□ -1.4
PRKDC-205ENST00000535375 DKK3Q9UBP4 350 aa6.33□□□□□ -1.4
PRKDC-205ENST00000535375 L1RE1Q9UN81 338 aa6.33□□□□□ -1.4
PRKDC-205ENST00000535375 VSTM5A8MXK1 200 aa6.32□□□□□ -1.4
PRKDC-205ENST00000535375 ARFIP2P53365 341 aa6.32□□□□□ -1.4
PRKDC-205ENST00000535375 CACNB3P54284 484 aa6.32□□□□□ -1.4
PRKDC-205ENST00000535375 CNN3Q15417 329 aaKnown RBP6.32□□□□□ -1.4
PRKDC-205ENST00000535375 SYCE2Q6PIF2 218 aa6.32□□□□□ -1.4
PRKDC-205ENST00000535375 CCDC149Q6ZUS6 474 aa6.32□□□□□ -1.4
PRKDC-205ENST00000535375 ZNF575Q86XF7 245 aa6.32□□□□□ -1.4
PRKDC-205ENST00000535375 RASAL3Q86YV0 1011 aa6.32□□□□□ -1.4
PRKDC-205ENST00000535375 WDR75Q8IWA0 830 aaKnown RBP6.32□□□□□ -1.4
PRKDC-205ENST00000535375 TSR2Q969E8 191 aaKnown RBP6.32□□□□□ -1.4
PRKDC-205ENST00000535375 MS4A7Q9GZW8 240 aaPredicted RBP6.32□□□□□ -1.4
PRKDC-205ENST00000535375 PRDM13Q9H4Q3 707 aa6.32□□□□□ -1.4
PRKDC-205ENST00000535375 ATP6V0A4Q9HBG4 840 aa6.32□□□□□ -1.4
PRKDC-205ENST00000535375 SERHLQ9NQF3 203 aa6.32□□□□□ -1.4
PRKDC-205ENST00000535375 NDRG4Q9ULP0 352 aaKnown RBP6.32□□□□□ -1.4
PRKDC-205ENST00000535375 COL11A2P13942 1736 aaPredicted RBP6.31□□□□□ -1.4
PRKDC-205ENST00000535375 A0A087WWL8 130 aa6.31□□□□□ -1.4
PRKDC-205ENST00000535375 hCG_1984214I3L0E3 225 aa6.31□□□□□ -1.4
PRKDC-205ENST00000535375 ONECUT2O95948 504 aa6.31□□□□□ -1.4
PRKDC-205ENST00000535375 FAM163BP0C2L3 166 aa6.31□□□□□ -1.4
PRKDC-205ENST00000535375 ELFN1P0C7U0 828 aa6.31□□□□□ -1.4
PRKDC-205ENST00000535375 BRAFP15056 766 aa6.31□□□□□ -1.4
PRKDC-205ENST00000535375 EN2P19622 333 aaPredicted RBP6.31□□□□□ -1.4
PRKDC-205ENST00000535375 CCT8P50990 548 aa6.31□□□□□ -1.4
PRKDC-205ENST00000535375 PDE1AP54750 535 aa6.31□□□□□ -1.4
PRKDC-205ENST00000535375 KRTAP5-3Q6L8H2 238 aa6.31□□□□□ -1.4
PRKDC-205ENST00000535375 SRGAP1Q7Z6B7 1085 aa6.31□□□□□ -1.4
PRKDC-205ENST00000535375 SLC15A3Q8IY34 581 aa6.31□□□□□ -1.4
PRKDC-205ENST00000535375 FAM98AQ8NCA5 519 aaKnown RBP6.31□□□□□ -1.4
PRKDC-205ENST00000535375 ZNF764Q96H86 408 aaPredicted RBP6.31□□□□□ -1.4
PRKDC-205ENST00000535375 ZNF518BQ9C0D4 1074 aa6.31□□□□□ -1.4
PRKDC-205ENST00000535375 GLOD4Q9HC38 313 aa6.31□□□□□ -1.4
PRKDC-205ENST00000535375 CCNL1Q9UK58 526 aaPredicted RBP6.31□□□□□ -1.4
PRKDC-205ENST00000535375 MRPS17Q9Y2R5 130 aaKnown RBP6.31□□□□□ -1.4
PRKDC-205ENST00000535375 PAXBP1Q9Y5B6 917 aa6.31□□□□□ -1.4
PRKDC-205ENST00000535375 WNT6Q9Y6F9 365 aa6.31□□□□□ -1.4
PRKDC-205ENST00000535375 MASP2O00187 686 aa6.3□□□□□ -1.4
PRKDC-205ENST00000535375 MGEA5O60502 916 aa6.3□□□□□ -1.4
PRKDC-205ENST00000535375 PROP1O75360 226 aa6.3□□□□□ -1.4
PRKDC-205ENST00000535375 ATF3P18847 181 aa6.3□□□□□ -1.4
PRKDC-205ENST00000535375 WT1P19544 449 aaPredicted RBP6.3□□□□□ -1.4
PRKDC-205ENST00000535375 PRKAG1P54619 331 aa6.3□□□□□ -1.4
PRKDC-205ENST00000535375 SUMO3P55854 103 aaPredicted RBP6.3□□□□□ -1.4
PRKDC-205ENST00000535375 KIAA0753Q2KHM9 967 aa6.3□□□□□ -1.4
PRKDC-205ENST00000535375 TREML2Q5T2D2 321 aa6.3□□□□□ -1.4
PRKDC-205ENST00000535375 RNF220Q5VTB9 566 aa6.3□□□□□ -1.4
PRKDC-205ENST00000535375 DARS2Q6PI48 645 aaKnown RBP6.3□□□□□ -1.4
PRKDC-205ENST00000535375 C14orf80Q86SX3 495 aa6.3□□□□□ -1.4
PRKDC-205ENST00000535375 COL23A1Q86Y22 540 aaPredicted RBP6.3□□□□□ -1.4
PRKDC-205ENST00000535375 ZNF280BQ86YH2 543 aa6.3□□□□□ -1.4
PRKDC-205ENST00000535375 ATG4AQ8WYN0 398 aa6.3□□□□□ -1.4
PRKDC-205ENST00000535375 RAPGEF4Q8WZA2 1011 aa6.3□□□□□ -1.4
PRKDC-205ENST00000535375 ANKS1AQ92625 1134 aa6.3□□□□□ -1.4
PRKDC-205ENST00000535375 MESP1Q9BRJ9 268 aa6.3□□□□□ -1.4
PRKDC-205ENST00000535375 C22orf23Q9BZE7 217 aa6.3□□□□□ -1.4
PRKDC-205ENST00000535375 A1CFQ9NQ94 594 aaKnown RBP6.3□□□□□ -1.4
PRKDC-205ENST00000535375 SACM1LQ9NTJ5 587 aa6.3□□□□□ -1.4
PRKDC-205ENST00000535375 SERTAD4Q9NUC0 356 aa6.3□□□□□ -1.4
PRKDC-205ENST00000535375 KLHL42Q9P2K6 505 aa6.3□□□□□ -1.4
PRKDC-205ENST00000535375 ARPP21Q9UBL0 812 aaPredicted RBP6.3□□□□□ -1.4
PRKDC-205ENST00000535375 SSX2IPQ9Y2D8 614 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms