RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 ASNSP08243 561 aa20.11■□□□□ 0.81
SMPD1-210ENST00000534405 AMPD1P23109 780 aa20.11■□□□□ 0.81
SMPD1-210ENST00000534405 CETN1Q12798 172 aa20.11■□□□□ 0.81
SMPD1-210ENST00000534405 C11orf63Q6NUN7 778 aa20.11■□□□□ 0.81
SMPD1-210ENST00000534405 KLHL35Q6PF15 583 aa20.11■□□□□ 0.81
SMPD1-210ENST00000534405 SLC47A2Q86VL8 602 aa20.11■□□□□ 0.81
SMPD1-210ENST00000534405 SCYL3Q8IZE3 742 aa20.11■□□□□ 0.81
SMPD1-210ENST00000534405 KIFC3Q9BVG8 833 aa20.11■□□□□ 0.81
SMPD1-210ENST00000534405 NDE1Q9NXR1 346 aa20.11■□□□□ 0.81
SMPD1-210ENST00000534405 CYP26A1O43174 497 aa20.11■□□□□ 0.81
SMPD1-210ENST00000534405 AP1G1O43747 822 aa20.11■□□□□ 0.81
SMPD1-210ENST00000534405 CDH16O75309 829 aa20.11■□□□□ 0.81
SMPD1-210ENST00000534405 LYPLA2O95372 231 aa20.11■□□□□ 0.81
SMPD1-210ENST00000534405 CETPP11597 493 aa20.11■□□□□ 0.81
SMPD1-210ENST00000534405 GEMIN4P57678 1058 aaKnown RBP20.11■□□□□ 0.81
SMPD1-210ENST00000534405 GPC5P78333 572 aa20.11■□□□□ 0.81
SMPD1-210ENST00000534405 TBL3Q12788 808 aaKnown RBP20.11■□□□□ 0.81
SMPD1-210ENST00000534405 SPARCL1Q14515 664 aa20.11■□□□□ 0.81
SMPD1-210ENST00000534405 EAPPQ56P03 285 aaPredicted RBP20.11■□□□□ 0.81
SMPD1-210ENST00000534405 TMEM63BQ5T3F8 832 aa20.11■□□□□ 0.81
SMPD1-210ENST00000534405 CCDC137Q6PK04 289 aaKnown RBP20.11■□□□□ 0.81
SMPD1-210ENST00000534405 TRIM67Q6ZTA4 783 aa20.11■□□□□ 0.81
SMPD1-210ENST00000534405 PIP4K2CQ8TBX8 421 aa20.11■□□□□ 0.81
SMPD1-210ENST00000534405 SYNGAP1Q96PV0 1343 aa20.1■□□□□ 0.81
SMPD1-210ENST00000534405 GAS8O95995 478 aa20.1■□□□□ 0.81
SMPD1-210ENST00000534405 CCNE2O96020 404 aa20.1■□□□□ 0.81
SMPD1-210ENST00000534405 COMTP21964 271 aa20.1■□□□□ 0.81
SMPD1-210ENST00000534405 SLC18A1P54219 525 aa20.1■□□□□ 0.81
SMPD1-210ENST00000534405 PDE1BQ01064 536 aa20.1■□□□□ 0.81
SMPD1-210ENST00000534405 MED21Q13503 144 aa20.1■□□□□ 0.81
SMPD1-210ENST00000534405 MESDQ14696 234 aa20.1■□□□□ 0.81
SMPD1-210ENST00000534405 FKBP1CQ5VVH2 108 aa20.1■□□□□ 0.81
SMPD1-210ENST00000534405 C1orf228Q6PIY5 440 aa20.1■□□□□ 0.81
SMPD1-210ENST00000534405 RBM44Q6ZP01 1051 aaKnown RBP20.1■□□□□ 0.81
SMPD1-210ENST00000534405 PDSS2Q86YH6 399 aa20.1■□□□□ 0.81
SMPD1-210ENST00000534405 FAM71AQ8IYT1 594 aa20.1■□□□□ 0.81
SMPD1-210ENST00000534405 ARHGAP24Q8N264 748 aa20.1■□□□□ 0.81
SMPD1-210ENST00000534405 BTBD6Q96KE9 485 aa20.1■□□□□ 0.81
SMPD1-210ENST00000534405 POP1Q99575 1024 aaKnown RBP20.1■□□□□ 0.81
SMPD1-210ENST00000534405 ZSWIM1Q9BR11 485 aa20.1■□□□□ 0.81
SMPD1-210ENST00000534405 UBN1Q9NPG3 1134 aa20.1■□□□□ 0.81
SMPD1-210ENST00000534405 BUD23O43709 281 aaKnown RBP20.1■□□□□ 0.81
SMPD1-210ENST00000534405 HAUS5O94927 633 aa20.1■□□□□ 0.81
SMPD1-210ENST00000534405 NCKAP1LP55160 1127 aa20.1■□□□□ 0.81
SMPD1-210ENST00000534405 TCEAL1Q15170 157 aa20.1■□□□□ 0.81
SMPD1-210ENST00000534405 LRRC8BQ6P9F7 803 aa20.1■□□□□ 0.81
SMPD1-210ENST00000534405 FAM83AQ86UY5 434 aa20.1■□□□□ 0.81
SMPD1-210ENST00000534405 PPM1KQ8N3J5 372 aa20.1■□□□□ 0.81
SMPD1-210ENST00000534405 ST6GALNAC4Q9H4F1 302 aa20.1■□□□□ 0.81
SMPD1-210ENST00000534405 EURLQ9NYK6 297 aa20.1■□□□□ 0.81
SMPD1-210ENST00000534405 TAS2R1Q9NYW7 299 aa20.1■□□□□ 0.81
SMPD1-210ENST00000534405 E9PBE3 544 aa20.09■□□□□ 0.81
SMPD1-210ENST00000534405 ACADVLP49748 655 aa20.09■□□□□ 0.81
SMPD1-210ENST00000534405 RPS6P62753 249 aaKnown RBP20.09■□□□□ 0.81
SMPD1-210ENST00000534405 GHRHRQ02643 423 aa20.09■□□□□ 0.81
SMPD1-210ENST00000534405 CALCOCO2Q13137 446 aa20.09■□□□□ 0.81
SMPD1-210ENST00000534405 KLHDC10Q6PID8 442 aa20.09■□□□□ 0.81
SMPD1-210ENST00000534405 Q6ZNX1 250 aa20.09■□□□□ 0.81
SMPD1-210ENST00000534405 TMEM110Q86TL2 294 aa20.09■□□□□ 0.81
SMPD1-210ENST00000534405 BBS5Q8N3I7 341 aa20.09■□□□□ 0.81
SMPD1-210ENST00000534405 DEPTORQ8TB45 409 aa20.09■□□□□ 0.81
SMPD1-210ENST00000534405 CCDC127Q96BQ5 260 aa20.09■□□□□ 0.81
SMPD1-210ENST00000534405 DDX18Q9NVP1 670 aaKnown RBP20.09■□□□□ 0.81
SMPD1-210ENST00000534405 TUBA8Q9NY65 449 aaPredicted RBP20.09■□□□□ 0.81
SMPD1-210ENST00000534405 TCRBV7S2A1N4TA0A589 114 aa20.08■□□□□ 0.81
SMPD1-210ENST00000534405 GGPS1O95749 300 aa20.08■□□□□ 0.81
SMPD1-210ENST00000534405 MYCLP12524 364 aaPredicted RBP20.08■□□□□ 0.81
SMPD1-210ENST00000534405 AP2B1P63010 937 aa20.08■□□□□ 0.81
SMPD1-210ENST00000534405 FMO1Q01740 532 aa20.08■□□□□ 0.81
SMPD1-210ENST00000534405 ASPHQ12797 758 aa20.08■□□□□ 0.81
SMPD1-210ENST00000534405 PGM5Q15124 567 aa20.08■□□□□ 0.81
SMPD1-210ENST00000534405 CYP1B1Q16678 543 aa20.08■□□□□ 0.81
SMPD1-210ENST00000534405 CLPPQ16740 277 aaPredicted RBP20.08■□□□□ 0.81
SMPD1-210ENST00000534405 PDCD4Q53EL6 469 aaKnown RBP20.08■□□□□ 0.81
SMPD1-210ENST00000534405 FAM102BQ5T8I3 360 aa20.08■□□□□ 0.81
SMPD1-210ENST00000534405 OTOAQ7RTW8 1153 aa20.08■□□□□ 0.81
SMPD1-210ENST00000534405 TREML1Q86YW5 311 aa20.08■□□□□ 0.81
SMPD1-210ENST00000534405 OR6Y1Q8NGX8 325 aa20.08■□□□□ 0.81
SMPD1-210ENST00000534405 DHRS1Q96LJ7 313 aa20.08■□□□□ 0.81
SMPD1-210ENST00000534405 TOPORSQ9NS56 1045 aaPredicted RBP20.08■□□□□ 0.81
SMPD1-210ENST00000534405 MIF4GDA9UHW6 222 aaKnown RBP20.08■□□□□ 0.8
SMPD1-210ENST00000534405 WNT10BO00744 389 aa20.08■□□□□ 0.8
SMPD1-210ENST00000534405 TP73O15350 636 aa20.08■□□□□ 0.8
SMPD1-210ENST00000534405 PRPF4O43172 522 aaKnown RBP eCLIP20.08■□□□□ 0.8
SMPD1-210ENST00000534405 MAGEC1O60732 1142 aa20.08■□□□□ 0.8
SMPD1-210ENST00000534405 UQCRBP14927 111 aa20.08■□□□□ 0.8
SMPD1-210ENST00000534405 ARFIP2P53365 341 aa20.08■□□□□ 0.8
SMPD1-210ENST00000534405 RPL26P61254 145 aaKnown RBP20.08■□□□□ 0.8
SMPD1-210ENST00000534405 SPIDRQ14159 915 aa20.08■□□□□ 0.8
SMPD1-210ENST00000534405 SNRNP35Q16560 246 aaKnown RBP20.08■□□□□ 0.8
SMPD1-210ENST00000534405 RHBDF2Q6PJF5 856 aa20.08■□□□□ 0.8
SMPD1-210ENST00000534405 NET1Q7Z628 596 aaPredicted RBP20.08■□□□□ 0.8
SMPD1-210ENST00000534405 MCF2L2Q86YR7 1114 aa20.08■□□□□ 0.8
SMPD1-210ENST00000534405 C4orf19Q8IY42 314 aa20.08■□□□□ 0.8
SMPD1-210ENST00000534405 CD101Q93033 1021 aa20.08■□□□□ 0.8
SMPD1-210ENST00000534405 HNRNPABQ99729 332 aaKnown RBP20.08■□□□□ 0.8
SMPD1-210ENST00000534405 RBM38Q9H0Z9 239 aaKnown RBP20.08■□□□□ 0.8
SMPD1-210ENST00000534405 SLC38A10Q9HBR0 1119 aa20.08■□□□□ 0.8
SMPD1-210ENST00000534405 WHRNQ9P202 907 aa20.08■□□□□ 0.8
SMPD1-210ENST00000534405 TBK1Q9UHD2 729 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms