RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 H0YGN5 161 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 PSMD14O00487 310 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 TRAPPC3O43617 180 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 MFAP3LO75121 409 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 H2AFYO75367 372 aaKnown RBP3.45□□□□□ -1.86
CSDE1-216ENST00000534389 ALDH1L1O75891 902 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 MBD4O95243 580 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 PENKP01210 267 aaPredicted RBP3.45□□□□□ -1.86
CSDE1-216ENST00000534389 PLA2G1BP04054 148 aaKnown RBP3.45□□□□□ -1.86
CSDE1-216ENST00000534389 SETSIPP0DME0 302 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 OSMP13725 252 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 FDPSP14324 419 aaKnown RBP3.45□□□□□ -1.86
CSDE1-216ENST00000534389 PFKFB1P16118 471 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 NR1D1P20393 614 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 ENPP1P22413 925 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 SP100P23497 879 aaPredicted RBP3.45□□□□□ -1.86
CSDE1-216ENST00000534389 CMA1P23946 247 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 POLD1P28340 1107 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 ALDH3A1P30838 453 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 ALDH5A1P51649 535 aaPredicted RBP3.45□□□□□ -1.86
CSDE1-216ENST00000534389 SLC5A3P53794 718 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 MLLT6P55198 1093 aaPredicted RBP3.45□□□□□ -1.86
CSDE1-216ENST00000534389 SESN2P58004 480 aaPredicted RBP3.45□□□□□ -1.86
CSDE1-216ENST00000534389 BPIFB4P59827 614 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 NCALDP61601 193 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 KCNJ2P63252 427 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 DEUP1Q05D60 604 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 IFFO1Q0D2I5 559 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 CCDC15Q0P6D6 951 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 G3BP1Q13283 466 aaKnown RBP eCLIP3.45□□□□□ -1.86
CSDE1-216ENST00000534389 ITGB3BPQ13352 177 aaPredicted RBP3.45□□□□□ -1.86
CSDE1-216ENST00000534389 PNOCQ13519 176 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 ZNF268Q14587 947 aaPredicted RBP3.45□□□□□ -1.86
CSDE1-216ENST00000534389 MAN2A1Q16706 1144 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 ZMAT1Q5H9K5 638 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 TOR2AQ5JU69 321 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 FKBP15Q5T1M5 1219 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 SLC9C2Q5TAH2 1124 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 EFCAB2Q5VUJ9 269 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 HAUS3Q68CZ6 603 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 SHC4Q6S5L8 630 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 STOX1Q6ZVD7 989 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 MIGA2Q7L4E1 593 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 GPR155Q7Z3F1 870 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 ZNF572Q7Z3I7 529 aaPredicted RBP3.45□□□□□ -1.86
CSDE1-216ENST00000534389 RALYLQ86SE5 291 aaKnown RBP3.45□□□□□ -1.86
CSDE1-216ENST00000534389 SAPCD2Q86UD0 394 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 TAX1BP1Q86VP1 789 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 PROSER1Q86XN7 944 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 GLB1L2Q8IW92 636 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 SP8Q8IXZ3 490 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 LRRC56Q8IYG6 542 aaPredicted RBP3.45□□□□□ -1.86
CSDE1-216ENST00000534389 CCDC170Q8IYT3 715 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 LINC00482Q8N8I6 264 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 ARL10Q8N8L6 244 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 CCDC63Q8NA47 563 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 CNBD1Q8NA66 436 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 OR5AN1Q8NGI8 311 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 OR14C36Q8NHC7 312 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 KLHDC4Q8TBB5 520 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 SSH3Q8TE77 659 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 AUTS2Q8WXX7 1259 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 RAPGEF5Q92565 580 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 CAVIN3Q969G5 261 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 AZIN2Q96A70 460 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 FOXRED1Q96CU9 486 aaPredicted RBP3.45□□□□□ -1.86
CSDE1-216ENST00000534389 CAPZA3Q96KX2 299 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 ARPC5LQ9BPX5 153 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 SLF1Q9BQI6 1058 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 SPATA25Q9BR10 227 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 LRRC1Q9BTT6 524 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 MENTQ9BUN1 341 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 AMNQ9BXJ7 453 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 STK31Q9BXU1 1019 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 TRIM4Q9C037 500 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 PDGFDQ9GZP0 370 aaPredicted RBP3.45□□□□□ -1.86
CSDE1-216ENST00000534389 USP44Q9H0E7 712 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 WNT8AQ9H1J5 351 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 C12orf65Q9H3J6 166 aaKnown RBP3.45□□□□□ -1.86
CSDE1-216ENST00000534389 VTA1Q9NP79 307 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 CD320Q9NPF0 282 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 SAMSN1Q9NSI8 373 aaKnown RBP3.45□□□□□ -1.86
CSDE1-216ENST00000534389 POLR3BQ9NW08 1133 aaPredicted RBP3.45□□□□□ -1.86
CSDE1-216ENST00000534389 SMARCAL1Q9NZC9 954 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 ADAM22Q9P0K1 906 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 TBC1D7Q9P0N9 293 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 NCDNQ9UBB6 729 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 DPP7Q9UHL4 492 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 SLC12A6Q9UHW9 1150 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 DENND2AQ9ULE3 1009 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 SLC12A4Q9UP95 1085 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 HPSEQ9Y251 543 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 THRAP3Q9Y2W1 955 aaKnown RBP3.45□□□□□ -1.86
CSDE1-216ENST00000534389 TMEM98Q9Y2Y6 226 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 LUC7L2Q9Y383 392 aaKnown RBP3.45□□□□□ -1.86
CSDE1-216ENST00000534389 LRRC42Q9Y546 428 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 NFS1Q9Y697 457 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 A0A1W2PP64 1363 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 MAP3K5Q99683 1374 aa3.45□□□□□ -1.86
CSDE1-216ENST00000534389 JCADQ9P266 1359 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms