RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 GCLMP48507 274 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 OSTNP61366 133 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 FAM189BP81408 668 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 C19orf57Q0VDD7 668 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 SYCP1Q15431 976 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 ZBTB6Q15916 424 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 ZACNQ401N2 412 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 EPC2Q52LR7 807 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 DCAF17Q5H9S7 520 aaPredicted RBP6.61□□□□□ -1.35
CMTM1-220ENST00000534143 FIGNQ5HY92 759 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 FKBP15Q5T1M5 1219 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 TCERG1LQ5VWI1 586 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 TWF2Q6IBS0 349 aaKnown RBP6.61□□□□□ -1.35
CMTM1-220ENST00000534143 GBP6Q6ZN66 633 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 ZNF771Q7L3S4 317 aaPredicted RBP6.61□□□□□ -1.35
CMTM1-220ENST00000534143 TMC6Q7Z403 805 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 USP37Q86T82 979 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 WDR49Q8IV35 697 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 CD302Q8IX05 232 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 EFCAB13Q8IY85 973 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 DBF4BQ8NFT6 615 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 MYRIPQ8NFW9 859 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 IPO4Q8TEX9 1081 aaKnown RBP6.61□□□□□ -1.35
CMTM1-220ENST00000534143 LINC01599Q8WXQ3 324 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 CCDC127Q96BQ5 260 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 ACAP3Q96P50 834 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 FNBP1Q96RU3 617 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 ADAM2Q99965 735 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 KRTAP4-8Q9BYQ9 185 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 CEP41Q9BYV8 373 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 IFIH1Q9BYX4 1025 aaKnown RBP6.61□□□□□ -1.35
CMTM1-220ENST00000534143 TTYH3Q9C0H2 523 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 CXCL16Q9H2A7 254 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 HIPK3Q9H422 1215 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 NXF3Q9H4D5 531 aaKnown RBP6.61□□□□□ -1.35
CMTM1-220ENST00000534143 PLEKHA5Q9HAU0 1116 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 TMEM8AQ9HCN3 771 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 SIX2Q9NPC8 291 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 RGS18Q9NS28 235 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 TOPORSQ9NS56 1045 aaPredicted RBP6.61□□□□□ -1.35
CMTM1-220ENST00000534143 FAM105AQ9NUU6 356 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 TMEM39AQ9NV64 488 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 IMPACTQ9P2X3 320 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 HES2Q9Y543 173 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 IPPQ9Y573 584 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 PCDHB2Q9Y5E7 798 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 TRIOBPQ9H2D6 2365 aa6.61□□□□□ -1.35
CMTM1-220ENST00000534143 LAMA2P24043 3122 aaKnown RBP6.61□□□□□ -1.35
CMTM1-220ENST00000534143 A0A0U1RQF3 1178 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 TRIM43BA6NCK2 446 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 PES1O00541 588 aaKnown RBP6.6□□□□□ -1.35
CMTM1-220ENST00000534143 ENPP3O14638 875 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 LRRN2O75325 713 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 RECQL4O94761 1208 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 NOL4O94818 638 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 VNN1O95497 513 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 TIMP1P01033 207 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 DLATP10515 647 aaKnown RBP6.6□□□□□ -1.35
CMTM1-220ENST00000534143 KCNE1P15382 129 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 SLC9A1P19634 815 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 ITGB8P26012 769 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 KLK7P49862 253 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 MXI1P50539 228 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 FXR1P51114 621 aaKnown RBP eCLIP6.6□□□□□ -1.35
CMTM1-220ENST00000534143 RAB27AP51159 221 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 AP3M2P53677 418 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 CCL23P55773 120 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 MYL7Q01449 175 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 IKBKEQ14164 716 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 EXOC3L4Q17RC7 722 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 TCTN1Q2MV58 587 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 TDRD10Q5VZ19 366 aaKnown RBP6.6□□□□□ -1.35
CMTM1-220ENST00000534143 HGSNATQ68CP4 663 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 LMBRD2Q68DH5 695 aaPredicted RBP6.6□□□□□ -1.35
CMTM1-220ENST00000534143 SPECC1LQ69YQ0 1117 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 KRT39Q6A163 491 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 SCARA3Q6AZY7 606 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 AGMOQ6ZNB7 445 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 ECHDC2Q86YB7 292 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 NT5DC4Q86YG4 428 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 SPC24Q8NBT2 197 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 OR5B17Q8NGF7 314 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 UBASH3BQ8TF42 649 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 DPF3Q92784 378 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 SEMA4DQ92854 862 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 APBB2Q92870 758 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 TRIM43Q96BQ3 446 aaPredicted RBP6.6□□□□□ -1.35
CMTM1-220ENST00000534143 SCLYQ96I15 445 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 FAM84AQ96KN4 292 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 SNX27Q96L92 541 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 ZMAT2Q96NC0 199 aaKnown RBP6.6□□□□□ -1.35
CMTM1-220ENST00000534143 TSPAN18Q96SJ8 248 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 CRACR2AQ9BSW2 395 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 NUP58Q9BVL2 599 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 FTHL17Q9BXU8 183 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 EDEM3Q9BZQ6 932 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 TRIM6Q9C030 488 aaPredicted RBP6.6□□□□□ -1.35
CMTM1-220ENST00000534143 GANQ9H2C0 597 aa6.6□□□□□ -1.35
CMTM1-220ENST00000534143 SOX17Q9H6I2 414 aaPredicted RBP6.6□□□□□ -1.35
CMTM1-220ENST00000534143 PLCB1Q9NQ66 1216 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms