RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 VPS53Q5VIR6 699 aa3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 HEATR6Q6AI08 1181 aaKnown RBP3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 GIMAP6Q6P9H5 292 aa3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 CD300LDQ6UXZ3 194 aa3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 TSHZ1Q6ZSZ6 1077 aa3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 SPATA31D4Q6ZUB0 917 aa3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 USP51Q70EK9 711 aa3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 STK32CQ86UX6 486 aa3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 TMEM173Q86WV6 379 aaPredicted RBP3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 CLASRPQ8N2M8 674 aaKnown RBP3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 TTC9BQ8N6N2 239 aa3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 TMEM87AQ8NBN3 555 aa3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 SLC22A17Q8WUG5 538 aa3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 DCAF4Q8WV16 495 aa3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 ATRIPQ8WXE1 791 aa3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 CPA5Q8WXQ8 436 aa3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 MRPS27Q92552 414 aaKnown RBP3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 CASP10Q92851 521 aa3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 DVL3Q92997 716 aaPredicted RBP3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 KISS1RQ969F8 398 aaPredicted RBP3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 NECTIN4Q96NY8 510 aa3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 MYADMQ96S97 322 aa3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 IWS1Q96ST2 819 aa3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 MPHOSPH6Q99547 160 aaKnown RBP3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 CDCA3Q99618 268 aaPredicted RBP3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 ADAM2Q99965 735 aa3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 PCDH18Q9HCL0 1135 aa3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 PXMP2Q9NR77 195 aa3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 RXFP3Q9NSD7 469 aa3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 KIAA1522Q9P206 1035 aaPredicted RBP3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 WNT16Q9UBV4 365 aa3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 ST6GALNAC2Q9UJ37 374 aa3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 ANGPTL2Q9UKU9 493 aa3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 SYNPO2Q9UMS6 1093 aa3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 DUSP12Q9UNI6 340 aa3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 NOC2LQ9Y3T9 749 aaKnown RBP3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 LAMA1P25391 3075 aa3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 CACNA1IQ9P0X4 2223 aa3.43□□□□□ -1.86
CHMP4A-208ENST00000534106 IGSF10Q6WRI0 2623 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 PARP14Q460N5 1801 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 NPHP3-ACAD11A0A0J9YXS1 232 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 GSTTP1A0A1W2PQM5 241 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 SRRM3A6NNA2 597 aaPredicted RBP3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 B4DLN1 442 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 NOP56O00567 594 aaKnown RBP3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 SLC30A4O14863 429 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 AURKAO14965 403 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 IPO8O15397 1037 aaKnown RBP3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 PPP1R11O60927 126 aaPredicted RBP3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 ATP9AO75110 1047 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 CAND2O75155 1236 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 PPM1BO75688 479 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 NTRK1P04629 796 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 CYP1A1P04798 512 aaPredicted RBP3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 SSBP05455 408 aaKnown RBP eCLIP3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 STAG3L1P0CL83 205 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 SRGAP2BP0DMP2 458 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 HSPD1P10809 573 aaKnown RBP3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 PDHBP11177 359 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 GNAT1P11488 350 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 C6P13671 934 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 TCF3P15923 654 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 NOVP48745 357 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 MRPL12P52815 198 aaKnown RBP3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 GPC5P78333 572 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 FAM189BP81408 668 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 MRPS6P82932 125 aaKnown RBP3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 MRPS9P82933 396 aaKnown RBP3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 AMPD2Q01433 879 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 UBE3AQ05086 875 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 ZNF543Q08ER8 600 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 DMWDQ09019 674 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 PPFIA1Q13136 1202 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 WTAPQ15007 396 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 PGM5Q15124 567 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 CDC37Q16543 378 aaPredicted RBP3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 SLC35G1Q2M3R5 365 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 QRICH1Q2TAL8 776 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 LONRF3Q496Y0 759 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 SOWAHCQ53LP3 525 aaPredicted RBP3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 WWC2Q6AWC2 1192 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 KIAA1841Q6NSI8 718 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 XRRA1Q6P2D8 792 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 DCLRE1AQ6PJP8 1040 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 C19orf48Q6RUI8 117 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 KCNT2Q6UVM3 1135 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 ETV3LQ6ZN32 361 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 LIMS2Q7Z4I7 341 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 ZC3H18Q86VM9 953 aaKnown RBP3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 ITPRIPQ8IWB1 547 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 ADGRF4Q8IZF3 695 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 TAB3Q8N5C8 712 aaPredicted RBP3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 RNF169Q8NCN4 708 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 RASGRP4Q8TDF6 673 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 MAP4K1Q92918 833 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 CASD1Q96PB1 797 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 SORCS2Q96PQ0 1159 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 PDCD2LQ9BRP1 358 aa3.42□□□□□ -1.86
CHMP4A-208ENST00000534106 SMOC1Q9H4F8 434 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms