RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 NIF3L1Q9GZT8 377 aa14.28□□□□□ -0.12
CMTM1-219ENST00000533953 KCNK12Q9HB15 430 aa14.28□□□□□ -0.12
CMTM1-219ENST00000533953 SAMSN1Q9NSI8 373 aaKnown RBP14.28□□□□□ -0.12
CMTM1-219ENST00000533953 MAGEC2Q9UBF1 373 aaPredicted RBP14.28□□□□□ -0.12
CMTM1-219ENST00000533953 MAGED2Q9UNF1 606 aaPredicted RBP14.28□□□□□ -0.12
CMTM1-219ENST00000533953 COQ4Q9Y3A0 265 aa14.28□□□□□ -0.12
CMTM1-219ENST00000533953 MTCL1Q9Y4B5 1905 aaKnown RBP14.27□□□□□ -0.12
CMTM1-219ENST00000533953 A0A1W2PRU2 124 aa14.27□□□□□ -0.13
CMTM1-219ENST00000533953 PI4K2BG5E9Z4 385 aa14.27□□□□□ -0.13
CMTM1-219ENST00000533953 P4HA1P13674 534 aa14.27□□□□□ -0.13
CMTM1-219ENST00000533953 CCDC130P13994 396 aa14.27□□□□□ -0.13
CMTM1-219ENST00000533953 HMGA1P17096 107 aaKnown RBP14.27□□□□□ -0.13
CMTM1-219ENST00000533953 WDR44Q5JSH3 913 aa14.27□□□□□ -0.13
CMTM1-219ENST00000533953 CCDC183Q5T5S1 534 aa14.27□□□□□ -0.13
CMTM1-219ENST00000533953 PAQR9Q6ZVX9 377 aa14.27□□□□□ -0.13
CMTM1-219ENST00000533953 GAREM2Q75VX8 874 aa14.27□□□□□ -0.13
CMTM1-219ENST00000533953 PLCD3Q8N3E9 789 aa14.27□□□□□ -0.13
CMTM1-219ENST00000533953 C2orf15Q8WU43 125 aaKnown RBP14.27□□□□□ -0.13
CMTM1-219ENST00000533953 KAT5Q92993 513 aa14.27□□□□□ -0.13
CMTM1-219ENST00000533953 PSMG2Q969U7 264 aa14.27□□□□□ -0.13
CMTM1-219ENST00000533953 ASAH2Q9NR71 780 aa14.27□□□□□ -0.13
CMTM1-219ENST00000533953 FAM49BQ9NUQ9 324 aa14.27□□□□□ -0.13
CMTM1-219ENST00000533953 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.27□□□□□ -0.13
CMTM1-219ENST00000533953 EPS15L1Q9UBC2 864 aa14.27□□□□□ -0.13
CMTM1-219ENST00000533953 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.27□□□□□ -0.13
CMTM1-219ENST00000533953 SLC38A8A6NNN8 435 aa14.26□□□□□ -0.13
CMTM1-219ENST00000533953 DCXO43602 365 aa14.26□□□□□ -0.13
CMTM1-219ENST00000533953 NARSO43776 548 aaKnown RBP14.26□□□□□ -0.13
CMTM1-219ENST00000533953 GNA14O95837 355 aa14.26□□□□□ -0.13
CMTM1-219ENST00000533953 CALCAP01258 141 aa14.26□□□□□ -0.13
CMTM1-219ENST00000533953 CCDC192P0DO97 292 aa14.26□□□□□ -0.13
CMTM1-219ENST00000533953 GABRR2P28476 465 aa14.26□□□□□ -0.13
CMTM1-219ENST00000533953 GRIK1P39086 918 aa14.26□□□□□ -0.13
CMTM1-219ENST00000533953 EPHA5P54756 1037 aa14.26□□□□□ -0.13
CMTM1-219ENST00000533953 MARSP56192 900 aaKnown RBP14.26□□□□□ -0.13
CMTM1-219ENST00000533953 CYP4F8P98187 520 aa14.26□□□□□ -0.13
CMTM1-219ENST00000533953 APBA1Q02410 837 aa14.26□□□□□ -0.13
CMTM1-219ENST00000533953 SMARCB1Q12824 385 aa14.26□□□□□ -0.13
CMTM1-219ENST00000533953 TAF12Q16514 161 aa14.26□□□□□ -0.13
CMTM1-219ENST00000533953 PTPN21Q16825 1174 aa14.26□□□□□ -0.13
CMTM1-219ENST00000533953 CFAP221Q4G0U5 840 aa14.26□□□□□ -0.13
CMTM1-219ENST00000533953 SASS6Q6UVJ0 657 aa14.26□□□□□ -0.13
CMTM1-219ENST00000533953 C4orf50Q6ZRC1 276 aa14.26□□□□□ -0.13
CMTM1-219ENST00000533953 CCDC150Q8NCX0 1101 aa14.26□□□□□ -0.13
CMTM1-219ENST00000533953 LMO3Q8TAP4 145 aa14.26□□□□□ -0.13
CMTM1-219ENST00000533953 FGF14Q92915 247 aa14.26□□□□□ -0.13
CMTM1-219ENST00000533953 KCNK16Q96T55 309 aa14.26□□□□□ -0.13
CMTM1-219ENST00000533953 CRACR2AQ9BSW2 395 aa14.26□□□□□ -0.13
CMTM1-219ENST00000533953 MED10Q9BTT4 135 aa14.26□□□□□ -0.13
CMTM1-219ENST00000533953 PLA2G2FQ9BZM2 168 aa14.26□□□□□ -0.13
CMTM1-219ENST00000533953 IL21Q9HBE4 155 aa14.26□□□□□ -0.13
CMTM1-219ENST00000533953 HSFX1Q9UBD0 423 aa14.26□□□□□ -0.13
CMTM1-219ENST00000533953 NUMBLQ9Y6R0 609 aa14.26□□□□□ -0.13
CMTM1-219ENST00000533953 NOTCH4Q99466 2003 aa14.25□□□□□ -0.13
CMTM1-219ENST00000533953 F8VP50 259 aa14.25□□□□□ -0.13
CMTM1-219ENST00000533953 CILPO75339 1184 aa14.25□□□□□ -0.13
CMTM1-219ENST00000533953 FGFR1OPO95684 399 aaKnown RBP14.25□□□□□ -0.13
CMTM1-219ENST00000533953 AFPP02771 609 aaKnown RBP14.25□□□□□ -0.13
CMTM1-219ENST00000533953 ERCC5P28715 1186 aaPredicted RBP14.25□□□□□ -0.13
CMTM1-219ENST00000533953 ADORA2BP29275 332 aa14.25□□□□□ -0.13
CMTM1-219ENST00000533953 MTIF2P46199 727 aaKnown RBP14.25□□□□□ -0.13
CMTM1-219ENST00000533953 USP46P62068 366 aa14.25□□□□□ -0.13
CMTM1-219ENST00000533953 RPL10AP62906 217 aaKnown RBP14.25□□□□□ -0.13
CMTM1-219ENST00000533953 VEPH1Q14D04 833 aa14.25□□□□□ -0.13
CMTM1-219ENST00000533953 FAM78AQ5JUQ0 283 aa14.25□□□□□ -0.13
CMTM1-219ENST00000533953 RRAGAQ7L523 313 aa14.25□□□□□ -0.13
CMTM1-219ENST00000533953 TMEM150AQ86TG1 271 aa14.25□□□□□ -0.13
CMTM1-219ENST00000533953 ARHGEF19Q8IW93 802 aa14.25□□□□□ -0.13
CMTM1-219ENST00000533953 FUKQ8N0W3 1084 aa14.25□□□□□ -0.13
CMTM1-219ENST00000533953 CRYBG2Q8N1P7 616 aa14.25□□□□□ -0.13
CMTM1-219ENST00000533953 SLC44A3Q8N4M1 653 aa14.25□□□□□ -0.13
CMTM1-219ENST00000533953 EHBP1Q8NDI1 1231 aa14.25□□□□□ -0.13
CMTM1-219ENST00000533953 SLC2A14Q8TDB8 520 aa14.25□□□□□ -0.13
CMTM1-219ENST00000533953 KXD1Q9BQD3 176 aa14.25□□□□□ -0.13
CMTM1-219ENST00000533953 ATXN3LQ9H3M9 355 aa14.25□□□□□ -0.13
CMTM1-219ENST00000533953 CYP3A43Q9HB55 503 aa14.25□□□□□ -0.13
CMTM1-219ENST00000533953 ABCB6Q9NP58 842 aa14.25□□□□□ -0.13
CMTM1-219ENST00000533953 C11orf16Q9NQ32 467 aa14.25□□□□□ -0.13
CMTM1-219ENST00000533953 AVENQ9NQS1 362 aaPredicted RBP14.25□□□□□ -0.13
CMTM1-219ENST00000533953 CISHQ9NSE2 258 aa14.25□□□□□ -0.13
CMTM1-219ENST00000533953 ASB3Q9Y575 518 aa14.25□□□□□ -0.13
CMTM1-219ENST00000533953 ANHXE9PGG2 379 aa14.24□□□□□ -0.13
CMTM1-219ENST00000533953 ZNF197O14709 1029 aa14.24□□□□□ -0.13
CMTM1-219ENST00000533953 BEST1O76090 585 aa14.24□□□□□ -0.13
CMTM1-219ENST00000533953 VIPR2P41587 438 aa14.24□□□□□ -0.13
CMTM1-219ENST00000533953 MAGEA11P43364 429 aa14.24□□□□□ -0.13
CMTM1-219ENST00000533953 ZXDAP98168 799 aa14.24□□□□□ -0.13
CMTM1-219ENST00000533953 INCA1Q0VD86 236 aa14.24□□□□□ -0.13
CMTM1-219ENST00000533953 CUL2Q13617 745 aa14.24□□□□□ -0.13
CMTM1-219ENST00000533953 HTR4Q13639 388 aa14.24□□□□□ -0.13
CMTM1-219ENST00000533953 MAPRE1Q15691 268 aaKnown RBP14.24□□□□□ -0.13
CMTM1-219ENST00000533953 TANGO2Q6ICL3 276 aa14.24□□□□□ -0.13
CMTM1-219ENST00000533953 GJB7Q6PEY0 223 aa14.24□□□□□ -0.13
CMTM1-219ENST00000533953 ITIH5Q86UX2 942 aa14.24□□□□□ -0.13
CMTM1-219ENST00000533953 FAM35AQ86V20 835 aa14.24□□□□□ -0.13
CMTM1-219ENST00000533953 UNC93AQ86WB7 457 aa14.24□□□□□ -0.13
CMTM1-219ENST00000533953 FUBP3Q96I24 572 aaKnown RBP eCLIP14.24□□□□□ -0.13
CMTM1-219ENST00000533953 TNIP3Q96KP6 325 aa14.24□□□□□ -0.13
CMTM1-219ENST00000533953 HEXIM2Q96MH2 286 aaKnown RBP14.24□□□□□ -0.13
CMTM1-219ENST00000533953 NT5C1AQ9BXI3 368 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms