RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 CUL4AQ13619 759 aa19.39■□□□□ 0.69
UBXN1-216ENST00000533908 INTS6LQ5JSJ4 861 aaKnown RBP19.39■□□□□ 0.69
UBXN1-216ENST00000533908 SV2BQ7L1I2 683 aa19.39■□□□□ 0.69
UBXN1-216ENST00000533908 MRPS31Q92665 395 aaKnown RBP19.39■□□□□ 0.69
UBXN1-216ENST00000533908 PCIF1Q9H4Z3 704 aa19.39■□□□□ 0.69
UBXN1-216ENST00000533908 GDAP2Q9NXN4 497 aa19.39■□□□□ 0.69
UBXN1-216ENST00000533908 RBAKQ9NYW8 714 aaPredicted RBP19.39■□□□□ 0.69
UBXN1-216ENST00000533908 ZNF638Q14966 1978 aaKnown RBP19.39■□□□□ 0.69
UBXN1-216ENST00000533908 SOBPA7XYQ1 873 aa19.38■□□□□ 0.69
UBXN1-216ENST00000533908 GABRDO14764 452 aa19.38■□□□□ 0.69
UBXN1-216ENST00000533908 HUS1O60921 280 aa19.38■□□□□ 0.69
UBXN1-216ENST00000533908 RNF40O75150 1001 aa19.38■□□□□ 0.69
UBXN1-216ENST00000533908 ATP2C2O75185 946 aa19.38■□□□□ 0.69
UBXN1-216ENST00000533908 GARTP22102 1010 aa19.38■□□□□ 0.69
UBXN1-216ENST00000533908 GJA4P35212 333 aa19.38■□□□□ 0.69
UBXN1-216ENST00000533908 RAP1GAPP47736 663 aa19.38■□□□□ 0.69
UBXN1-216ENST00000533908 CACNA1BQ00975 2339 aa19.38■□□□□ 0.69
UBXN1-216ENST00000533908 CEBPZQ03701 1054 aaKnown RBP19.38■□□□□ 0.69
UBXN1-216ENST00000533908 PTPRJQ12913 1337 aa19.38■□□□□ 0.69
UBXN1-216ENST00000533908 RESTQ13127 1097 aa19.38■□□□□ 0.69
UBXN1-216ENST00000533908 ZNF268Q14587 947 aaPredicted RBP19.38■□□□□ 0.69
UBXN1-216ENST00000533908 SOWAHAQ2M3V2 549 aa19.38■□□□□ 0.69
UBXN1-216ENST00000533908 LRRC52Q8N7C0 313 aa19.38■□□□□ 0.69
UBXN1-216ENST00000533908 TRMT2BQ96GJ1 504 aaKnown RBP19.38■□□□□ 0.69
UBXN1-216ENST00000533908 KIF9Q9HAQ2 790 aa19.38■□□□□ 0.69
UBXN1-216ENST00000533908 ABCB6Q9NP58 842 aa19.38■□□□□ 0.69
UBXN1-216ENST00000533908 OLFML3Q9NRN5 406 aa19.38■□□□□ 0.69
UBXN1-216ENST00000533908 EXOC7Q9UPT5 735 aa19.38■□□□□ 0.69
UBXN1-216ENST00000533908 SNX9Q9Y5X1 595 aa19.38■□□□□ 0.69
UBXN1-216ENST00000533908 CCDC163A0A0D9SF12 145 aa19.37■□□□□ 0.69
UBXN1-216ENST00000533908 FRMD3A2A2Y4 597 aa19.37■□□□□ 0.69
UBXN1-216ENST00000533908 TM4SF5O14894 197 aa19.37■□□□□ 0.69
UBXN1-216ENST00000533908 RPP40O75818 363 aaKnown RBP19.37■□□□□ 0.69
UBXN1-216ENST00000533908 PRPF6O94906 941 aaKnown RBP19.37■□□□□ 0.69
UBXN1-216ENST00000533908 IDEP14735 1019 aa19.37■□□□□ 0.69
UBXN1-216ENST00000533908 LMO2P25791 158 aa19.37■□□□□ 0.69
UBXN1-216ENST00000533908 RPL10AP62906 217 aaKnown RBP19.37■□□□□ 0.69
UBXN1-216ENST00000533908 ZNF77Q15935 545 aa19.37■□□□□ 0.69
UBXN1-216ENST00000533908 LMBRD2Q68DH5 695 aaPredicted RBP19.37■□□□□ 0.69
UBXN1-216ENST00000533908 CC2D1AQ6P1N0 951 aaPredicted RBP19.37■□□□□ 0.69
UBXN1-216ENST00000533908 FAM171BQ6P995 826 aa19.37■□□□□ 0.69
UBXN1-216ENST00000533908 TMEM86AQ8N2M4 240 aa19.37■□□□□ 0.69
UBXN1-216ENST00000533908 GLIS3Q8NEA6 775 aa19.37■□□□□ 0.69
UBXN1-216ENST00000533908 OR5B17Q8NGF7 314 aa19.37■□□□□ 0.69
UBXN1-216ENST00000533908 CACTINQ8WUQ7 758 aaKnown RBP19.37■□□□□ 0.69
UBXN1-216ENST00000533908 ECT2Q9H8V3 914 aa19.37■□□□□ 0.69
UBXN1-216ENST00000533908 GCNT4Q9P109 453 aa19.37■□□□□ 0.69
UBXN1-216ENST00000533908 SLC8A2Q9UPR5 921 aa19.37■□□□□ 0.69
UBXN1-216ENST00000533908 PCDHB13Q9Y5F0 798 aa19.37■□□□□ 0.69
UBXN1-216ENST00000533908 EML5Q05BV3 1969 aa19.37■□□□□ 0.69
UBXN1-216ENST00000533908 ANTXRLA6NF34 631 aa19.36■□□□□ 0.69
UBXN1-216ENST00000533908 ATG13O75143 517 aa19.36■□□□□ 0.69
UBXN1-216ENST00000533908 LDHAP00338 332 aaKnown RBP19.36■□□□□ 0.69
UBXN1-216ENST00000533908 KRT19P08727 400 aa19.36■□□□□ 0.69
UBXN1-216ENST00000533908 RBP5P82980 135 aa19.36■□□□□ 0.69
UBXN1-216ENST00000533908 MYL7Q01449 175 aa19.36■□□□□ 0.69
UBXN1-216ENST00000533908 FAM160A1Q05DH4 1040 aa19.36■□□□□ 0.69
UBXN1-216ENST00000533908 MTF1Q14872 753 aa19.36■□□□□ 0.69
UBXN1-216ENST00000533908 PDGFRLQ15198 375 aa19.36■□□□□ 0.69
UBXN1-216ENST00000533908 CACNA2D4Q7Z3S7 1137 aa19.36■□□□□ 0.69
UBXN1-216ENST00000533908 LIMS2Q7Z4I7 341 aa19.36■□□□□ 0.69
UBXN1-216ENST00000533908 SYCP3Q8IZU3 236 aa19.36■□□□□ 0.69
UBXN1-216ENST00000533908 ARL14EPQ8N8R7 260 aaPredicted RBP19.36■□□□□ 0.69
UBXN1-216ENST00000533908 P2RY13Q9BPV8 354 aa19.36■□□□□ 0.69
UBXN1-216ENST00000533908 MTMR12Q9C0I1 747 aa19.36■□□□□ 0.69
UBXN1-216ENST00000533908 LINC00597Q9H2U6 94 aa19.36■□□□□ 0.69
UBXN1-216ENST00000533908 SMOC1Q9H4F8 434 aa19.36■□□□□ 0.69
UBXN1-216ENST00000533908 TRPC7Q9HCX4 862 aa19.36■□□□□ 0.69
UBXN1-216ENST00000533908 PANK4Q9NVE7 773 aa19.36■□□□□ 0.69
UBXN1-216ENST00000533908 ITGA11Q9UKX5 1188 aa19.36■□□□□ 0.69
UBXN1-216ENST00000533908 WNT6Q9Y6F9 365 aa19.36■□□□□ 0.69
UBXN1-216ENST00000533908 C2orf78A6NCI8 922 aa19.35■□□□□ 0.69
UBXN1-216ENST00000533908 EPN2O95208 641 aa19.35■□□□□ 0.69
UBXN1-216ENST00000533908 ZNF806P0C7X5 589 aa19.35■□□□□ 0.69
UBXN1-216ENST00000533908 ZXDBP98169 803 aa19.35■□□□□ 0.69
UBXN1-216ENST00000533908 CFAP221Q4G0U5 840 aa19.35■□□□□ 0.69
UBXN1-216ENST00000533908 PLA2G2CQ5R387 149 aa19.35■□□□□ 0.69
UBXN1-216ENST00000533908 SCN4BQ8IWT1 228 aa19.35■□□□□ 0.69
UBXN1-216ENST00000533908 ADGRF2Q8IZF7 708 aa19.35■□□□□ 0.69
UBXN1-216ENST00000533908 TOP6BLQ8N6T0 577 aa19.35■□□□□ 0.69
UBXN1-216ENST00000533908 TTC16Q8NEE8 873 aa19.35■□□□□ 0.69
UBXN1-216ENST00000533908 NOC3LQ8WTT2 800 aaKnown RBP19.35■□□□□ 0.69
UBXN1-216ENST00000533908 OSCP1Q8WVF1 389 aa19.35■□□□□ 0.69
UBXN1-216ENST00000533908 KBTBD7Q8WVZ9 684 aa19.35■□□□□ 0.69
UBXN1-216ENST00000533908 HPS3Q969F9 1004 aa19.35■□□□□ 0.69
UBXN1-216ENST00000533908 LOXL4Q96JB6 756 aa19.35■□□□□ 0.69
UBXN1-216ENST00000533908 ZC3H10Q96K80 434 aaKnown RBP19.35■□□□□ 0.69
UBXN1-216ENST00000533908 HHIPQ96QV1 700 aa19.35■□□□□ 0.69
UBXN1-216ENST00000533908 INTS13Q9NVM9 706 aa19.35■□□□□ 0.69
UBXN1-216ENST00000533908 DUS2Q9NX74 493 aaKnown RBP19.35■□□□□ 0.69
UBXN1-216ENST00000533908 UXTQ9UBK9 157 aaPredicted RBP19.35■□□□□ 0.69
UBXN1-216ENST00000533908 CHD8Q9HCK8 2581 aa19.34■□□□□ 0.69
UBXN1-216ENST00000533908 GREB1Q4ZG55 1949 aa19.34■□□□□ 0.69
UBXN1-216ENST00000533908 ANAPC1Q9H1A4 1944 aa19.34■□□□□ 0.69
UBXN1-216ENST00000533908 USP17L7P0C7H9 530 aa19.34■□□□□ 0.69
UBXN1-216ENST00000533908 SYT1P21579 422 aa19.34■□□□□ 0.69
UBXN1-216ENST00000533908 DRD1P21728 446 aa19.34■□□□□ 0.69
UBXN1-216ENST00000533908 HOXD13P35453 343 aa19.34■□□□□ 0.69
UBXN1-216ENST00000533908 LHX1P48742 406 aa19.34■□□□□ 0.69
UBXN1-216ENST00000533908 USP4Q13107 963 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms