RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 ZNF568Q3ZCX4 644 aa10.23□□□□□ -0.77
CHKA-207ENST00000533728 TTMPQ5BVD1 217 aa10.23□□□□□ -0.77
CHKA-207ENST00000533728 LMBRD2Q68DH5 695 aaPredicted RBP10.23□□□□□ -0.77
CHKA-207ENST00000533728 SPOPLQ6IQ16 392 aa10.23□□□□□ -0.77
CHKA-207ENST00000533728 DRICH1Q6PGQ1 229 aaPredicted RBP10.23□□□□□ -0.77
CHKA-207ENST00000533728 EEPD1Q7L9B9 569 aa10.23□□□□□ -0.77
CHKA-207ENST00000533728 ZNF410Q86VK4 478 aa10.23□□□□□ -0.77
CHKA-207ENST00000533728 HOOK3Q86VS8 718 aa10.23□□□□□ -0.77
CHKA-207ENST00000533728 RHPN2Q8IUC4 686 aa10.23□□□□□ -0.77
CHKA-207ENST00000533728 FBXO16Q8IX29 292 aaPredicted RBP10.23□□□□□ -0.77
CHKA-207ENST00000533728 BBOF1Q8ND07 529 aa10.23□□□□□ -0.77
CHKA-207ENST00000533728 C3orf20Q8ND61 904 aa10.23□□□□□ -0.77
CHKA-207ENST00000533728 FNIP1Q8TF40 1166 aa10.23□□□□□ -0.77
CHKA-207ENST00000533728 ARL8AQ96BM9 186 aa10.23□□□□□ -0.77
CHKA-207ENST00000533728 TSPAN18Q96SJ8 248 aa10.23□□□□□ -0.77
CHKA-207ENST00000533728 CAPS2Q9BXY5 557 aa10.23□□□□□ -0.77
CHKA-207ENST00000533728 BCO2Q9BYV7 579 aa10.23□□□□□ -0.77
CHKA-207ENST00000533728 CELF4Q9BZC1 486 aaKnown RBP10.23□□□□□ -0.77
CHKA-207ENST00000533728 XYLT2Q9H1B5 865 aa10.23□□□□□ -0.77
CHKA-207ENST00000533728 CDT1Q9H211 546 aa10.23□□□□□ -0.77
CHKA-207ENST00000533728 NEUROG2Q9H2A3 272 aa10.23□□□□□ -0.77
CHKA-207ENST00000533728 PABPC3Q9H361 631 aaKnown RBP10.23□□□□□ -0.77
CHKA-207ENST00000533728 RPF1Q9H9Y2 349 aaKnown RBP10.23□□□□□ -0.77
CHKA-207ENST00000533728 ALG13Q9NP73 1137 aaKnown RBP10.23□□□□□ -0.77
CHKA-207ENST00000533728 GRHL1Q9NZI5 618 aa10.23□□□□□ -0.77
CHKA-207ENST00000533728 WDR35Q9P2L0 1181 aa10.23□□□□□ -0.77
CHKA-207ENST00000533728 H0Y858 1186 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 WEE2P0C1S8 567 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 P4HA1P13674 534 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 ITIH2P19823 946 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 MARK3P27448 753 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 POLR2BP30876 1174 aaKnown RBP10.22□□□□□ -0.77
CHKA-207ENST00000533728 TNFSF9P41273 254 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 LMNB2Q03252 620 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 TLE2Q04725 743 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 DHX9Q08211 1270 aaKnown RBP10.22□□□□□ -0.77
CHKA-207ENST00000533728 PTK6Q13882 451 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 PIGHQ14442 188 aaPredicted RBP10.22□□□□□ -0.77
CHKA-207ENST00000533728 CCNG2Q16589 344 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 PTPROQ16827 1216 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 ZNF699Q32M78 642 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 CEP85LQ5SZL2 805 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 RASIP1Q5U651 963 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 OLFML2BQ68BL8 750 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 ZDHHC24Q6UX98 284 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 DDX42Q86XP3 938 aaKnown RBP eCLIP10.22□□□□□ -0.77
CHKA-207ENST00000533728 RCOR2Q8IZ40 523 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 ZDHHC14Q8IZN3 488 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 CCHCR1Q8TD31 782 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 CPA5Q8WXQ8 436 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 ART4Q93070 314 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 PBXIP1Q96AQ6 731 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 RBM41Q96IZ5 413 aaKnown RBP10.22□□□□□ -0.77
CHKA-207ENST00000533728 APBA2Q99767 749 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 HINFPQ9BQA5 517 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 TRIM51Q9BSJ1 452 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 FRMD8P1Q9BZ68 369 aaPredicted RBP10.22□□□□□ -0.77
CHKA-207ENST00000533728 MTMR12Q9C0I1 747 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 KATNBL1Q9H079 304 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 IFT122Q9HBG6 1241 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 TLR9Q9NR96 1032 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 CISHQ9NSE2 258 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 DDX56Q9NY93 547 aaKnown RBP10.22□□□□□ -0.77
CHKA-207ENST00000533728 KIAA1257Q9ULG3 409 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 EFR3BQ9Y2G0 817 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 C2CD2Q9Y426 696 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 IVNS1ABPQ9Y6Y0 642 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 MYO18BQ8IUG5 2567 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 CEP295Q9C0D2 2601 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 ZZEF1O43149 2961 aa10.22□□□□□ -0.77
CHKA-207ENST00000533728 TMEM191CA6NGB0 347 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 RRN3P2A6NIE6 340 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 SOBPA7XYQ1 873 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 INO80B-WBP1J3KQ70 363 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 RFXAPO00287 272 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 KIAA0355O15063 1070 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 EIF3HO15372 352 aaKnown RBP eCLIP10.21□□□□□ -0.77
CHKA-207ENST00000533728 GAS8O95995 478 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 CST3P01034 146 aaPredicted RBP10.21□□□□□ -0.77
CHKA-207ENST00000533728 CLTBP09497 229 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 RARGP13631 454 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 INSRRP14616 1297 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 NR1D1P20393 614 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 ADORA2AP29274 412 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 ASPAP45381 313 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 IRAK1P51617 712 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 CDR1P51861 262 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 MYL6P60660 151 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 ZNF844Q08AG5 666 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 KLF1Q13351 362 aaPredicted RBP10.21□□□□□ -0.77
CHKA-207ENST00000533728 STILQ15468 1287 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 AMHR2Q16671 573 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 DUSP28Q4G0W2 176 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 SGO2Q562F6 1265 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 ZNF667Q5HYK9 610 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 PPP1R15BQ5SWA1 713 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 IQSEC1Q6DN90 963 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 TTC27Q6P3X3 843 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 LRRC31Q6UY01 552 aa10.21□□□□□ -0.77
CHKA-207ENST00000533728 TRMT10CQ7L0Y3 403 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms