RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 NFU1Q9UMS0 254 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 TNFSF13BQ9Y275 285 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 FHOD1Q9Y613 1164 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 CASTOR2A6NHX0 329 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 SYNCRIPO60506 623 aaKnown RBP11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 DNAJC6O75061 913 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 POMCP01189 267 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 KRT14P02533 472 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 ADH1AP07327 375 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 CKBP12277 381 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 RPL9P32969 192 aaKnown RBP11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 CTNNB1P35222 781 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 RTP1P59025 263 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 SLC7A5Q01650 507 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 ITGA7Q13683 1181 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 LLGL1Q15334 1064 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 SYTL3Q4VX76 610 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 TRIML2Q8N7C3 387 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 ATP11CQ8NB49 1132 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 ATL2Q8NHH9 583 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 CPA5Q8WXQ8 436 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 TMEM176AQ96HP8 235 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 AP1M1Q9BXS5 423 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 HIPK3Q9H422 1215 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 FGFR1OP2Q9NVK5 253 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 DDX43Q9NXZ2 648 aaKnown RBP11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 DDX20Q9UHI6 824 aaKnown RBP11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 GOLGA8MH3BSY2 632 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 LAG3P18627 525 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 EIF2B5Q13144 721 aaKnown RBP11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 PKN2Q16513 984 aaKnown RBP11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 MTHFD1LQ6UB35 978 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 TRIM67Q6ZTA4 783 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 MAP4K3Q8IVH8 894 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 ZNF507Q8TCN5 953 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 FAM167BQ9BTA0 163 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 CINPQ9BW66 212 aaPredicted RBP11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.76□□□□□ -0.532e-6■□□□□ 10.1
AMBRA1-211ENST00000533727 KRT82Q9NSB4 513 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 GIT1Q9Y2X7 761 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 GMNCA6NCL1 334 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 RASSF10A6NK89 507 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 TEX33O43247 280 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 FGF19O95750 216 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 CXCL8P10145 99 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 SELPP16109 830 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 ZNF135P52742 658 aaPredicted RBP11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 NOMO2Q5JPE7 1267 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 GJC2Q5T442 439 aaPredicted RBP11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 ACOT1Q86TX2 421 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 DDX42Q86XP3 938 aaKnown RBP eCLIP11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 UBA3Q8TBC4 463 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 TSPAN17Q96FV3 270 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 EIF2AQ9BY44 585 aaKnown RBP11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 TRIM45Q9H8W5 580 aaPredicted RBP11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 DMAP1Q9NPF5 467 aaPredicted RBP11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 NDFIP2Q9NV92 336 aa11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.76□□□□□ -0.53
AMBRA1-211ENST00000533727 H0Y3Z8 333 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 ANXA9O76027 345 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 GALCP54803 685 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 CDR2Q01850 454 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 ANKS3Q6ZW76 656 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 IFNL1Q8IU54 200 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 SNF8Q96H20 258 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 L3MBTL3Q96JM7 780 aaPredicted RBP11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 OXCT2Q9BYC2 517 aaPredicted RBP11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 UBXN6Q9BZV1 441 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 PACSIN2Q9UNF0 486 aaPredicted RBP11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 DCTN3O75935 186 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 MMEP08473 750 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 PDHA1P08559 390 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 DNAJB2P25686 324 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 IFNA8P32881 189 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 PTPN11Q06124 597 aaPredicted RBP11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 GRAMD1BQ3KR37 738 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 ACAD10Q6JQN1 1059 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 ARHGEF26Q96DR7 871 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 PAK5Q9P286 719 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 PLAAQ9Y263 795 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 CFAP73A6NFT4 308 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 PSMD10O75832 226 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 GRAMD4Q6IC98 578 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 LINC00523Q86TU6 105 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 CBWD1Q9BRT8 395 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 SLC13A4Q9UKG4 626 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 MYO1DO94832 1006 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 HIST1H2AGP0C0S8 130 aaPredicted RBP11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 SLC9A1P19634 815 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 HIST1H2ADP20671 130 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 SMARCB1Q12824 385 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 PDK2Q15119 407 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 HIST1H2AHQ96KK5 128 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 CCDC138Q96M89 665 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 HIST1H2AJQ99878 128 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 H2AFJQ9BTM1 129 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 PLA2G4CQ9UP65 541 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 SNCAIPQ9Y6H5 919 aa11.75□□□□□ -0.53
AMBRA1-211ENST00000533727 M0QYT0 321 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms