RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 LILRA6Q6PI73 481 aa12.65□□□□□ -0.38
COMMD9-208ENST00000533643 ADGRD2Q7Z7M1 963 aa12.65□□□□□ -0.38
COMMD9-208ENST00000533643 PALB2Q86YC2 1186 aa12.65□□□□□ -0.38
COMMD9-208ENST00000533643 FMNL3Q8IVF7 1028 aa12.65□□□□□ -0.38
COMMD9-208ENST00000533643 ATAD1Q8NBU5 361 aa12.65□□□□□ -0.38
COMMD9-208ENST00000533643 SLC2A14Q8TDB8 520 aa12.65□□□□□ -0.38
COMMD9-208ENST00000533643 SLC20A1Q8WUM9 679 aa12.65□□□□□ -0.38
COMMD9-208ENST00000533643 ZNF606Q8WXB4 792 aa12.65□□□□□ -0.38
COMMD9-208ENST00000533643 DDX1Q92499 740 aaKnown RBP12.65□□□□□ -0.38
COMMD9-208ENST00000533643 PCED1BQ96HM7 432 aa12.65□□□□□ -0.38
COMMD9-208ENST00000533643 PDLIM2Q96JY6 352 aa12.65□□□□□ -0.38
COMMD9-208ENST00000533643 PGLYRP2Q96PD5 576 aa12.65□□□□□ -0.38
COMMD9-208ENST00000533643 SYT11Q9BT88 431 aa12.65□□□□□ -0.38
COMMD9-208ENST00000533643 MED10Q9BTT4 135 aa12.65□□□□□ -0.38
COMMD9-208ENST00000533643 RHOBTB2Q9BYZ6 727 aa12.65□□□□□ -0.38
COMMD9-208ENST00000533643 ZNF518BQ9C0D4 1074 aa12.65□□□□□ -0.38
COMMD9-208ENST00000533643 AFF4Q9UHB7 1163 aaKnown RBP12.65□□□□□ -0.38
COMMD9-208ENST00000533643 PCDHB5Q9Y5E4 795 aa12.65□□□□□ -0.38
COMMD9-208ENST00000533643 MTMR11A4FU01 709 aa12.64□□□□□ -0.39
COMMD9-208ENST00000533643 PER2O15055 1255 aa12.64□□□□□ -0.39
COMMD9-208ENST00000533643 TGM5O43548 720 aa12.64□□□□□ -0.39
COMMD9-208ENST00000533643 SERPING1P05155 500 aa12.64□□□□□ -0.39
COMMD9-208ENST00000533643 BDNFP23560 247 aa12.64□□□□□ -0.39
COMMD9-208ENST00000533643 CYP2F1P24903 491 aa12.64□□□□□ -0.39
COMMD9-208ENST00000533643 ADORA2BP29275 332 aa12.64□□□□□ -0.39
COMMD9-208ENST00000533643 SSTR3P32745 418 aaPredicted RBP12.64□□□□□ -0.39
COMMD9-208ENST00000533643 PDE6CP51160 858 aa12.64□□□□□ -0.39
COMMD9-208ENST00000533643 KLHL30Q0D2K2 578 aa12.64□□□□□ -0.39
COMMD9-208ENST00000533643 SMARCB1Q12824 385 aa12.64□□□□□ -0.39
COMMD9-208ENST00000533643 ADGRE1Q14246 886 aa12.64□□□□□ -0.39
COMMD9-208ENST00000533643 STILQ15468 1287 aa12.64□□□□□ -0.39
COMMD9-208ENST00000533643 MEA1Q16626 185 aa12.64□□□□□ -0.39
COMMD9-208ENST00000533643 TSR1Q2NL82 804 aaKnown RBP12.64□□□□□ -0.39
COMMD9-208ENST00000533643 GOLGA7BQ2TAP0 167 aa12.64□□□□□ -0.39
COMMD9-208ENST00000533643 LCLAT1Q6UWP7 414 aa12.64□□□□□ -0.39
COMMD9-208ENST00000533643 C4orf50Q6ZRC1 276 aa12.64□□□□□ -0.39
COMMD9-208ENST00000533643 CCDC186Q7Z3E2 898 aa12.64□□□□□ -0.39
COMMD9-208ENST00000533643 ZNF571Q7Z3V5 609 aaPredicted RBP12.64□□□□□ -0.39
COMMD9-208ENST00000533643 SPATA2LQ8IUW3 424 aaPredicted RBP12.64□□□□□ -0.39
COMMD9-208ENST00000533643 ZNF461Q8TAF7 563 aa12.64□□□□□ -0.39
COMMD9-208ENST00000533643 OLIG1Q8TAK6 271 aa12.64□□□□□ -0.39
COMMD9-208ENST00000533643 C2orf15Q8WU43 125 aaKnown RBP12.64□□□□□ -0.39
COMMD9-208ENST00000533643 SLC22A17Q8WUG5 538 aa12.64□□□□□ -0.39
COMMD9-208ENST00000533643 FAM161BQ96MY7 647 aa12.64□□□□□ -0.39
COMMD9-208ENST00000533643 PANX2Q96RD6 677 aa12.64□□□□□ -0.39
COMMD9-208ENST00000533643 CRISPLD1Q9H336 500 aa12.64□□□□□ -0.39
COMMD9-208ENST00000533643 HAUS4Q9H6D7 363 aa12.64□□□□□ -0.39
COMMD9-208ENST00000533643 TLE6Q9H808 572 aa12.64□□□□□ -0.39
COMMD9-208ENST00000533643 ABCB6Q9NP58 842 aa12.64□□□□□ -0.39
COMMD9-208ENST00000533643 ABI2Q9NYB9 513 aaPredicted RBP12.64□□□□□ -0.39
COMMD9-208ENST00000533643 LMCD1Q9NZU5 365 aa12.64□□□□□ -0.39
COMMD9-208ENST00000533643 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.64□□□□□ -0.39
COMMD9-208ENST00000533643 SLC27A5Q9Y2P5 690 aa12.64□□□□□ -0.39
COMMD9-208ENST00000533643 COL4A4P53420 1690 aaPredicted RBP12.64□□□□□ -0.39
COMMD9-208ENST00000533643 GOLGA6L6A8MZA4 724 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 MED7O43513 233 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 MICAL2O94851 1124 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 SEC24AO95486 1093 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 C1RP00736 705 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 MMEP08473 750 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 PLEKP08567 350 aaPredicted RBP12.63□□□□□ -0.39
COMMD9-208ENST00000533643 SPATA31D3P0C874 917 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 ATF2P15336 505 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 POU3F3P20264 500 aaPredicted RBP12.63□□□□□ -0.39
COMMD9-208ENST00000533643 CLCN4P51793 760 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 CACNA2D1P54289 1103 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 FMO1Q01740 532 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 CDR2Q01850 454 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 ADCY1Q08828 1119 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 DUSP4Q13115 394 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 DUSP6Q16828 381 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 CFAP221Q4G0U5 840 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 PKDCCQ504Y2 493 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 GPR153Q6NV75 609 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 DENND1BQ6P3S1 775 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 SPATA31D4Q6ZUB0 917 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 RBM23Q86U06 439 aaKnown RBP12.63□□□□□ -0.39
COMMD9-208ENST00000533643 FAM35AQ86V20 835 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 TTC30AQ86WT1 665 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 ZNF677Q86XU0 584 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 TCEAL8Q8IYN2 117 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 TTC9BQ8N6N2 239 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 ANKRD52Q8NB46 1076 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 SPPL2BQ8TCT7 592 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 FUBP3Q96I24 572 aaKnown RBP eCLIP12.63□□□□□ -0.39
COMMD9-208ENST00000533643 AGPAT1Q99943 283 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 KRT82Q9NSB4 513 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 TMEM30AQ9NV96 361 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 ZNHIT6Q9NWK9 470 aaKnown RBP12.63□□□□□ -0.39
COMMD9-208ENST00000533643 ARHGAP20Q9P2F6 1191 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 TSPAN16Q9UKR8 245 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 MAFFQ9ULX9 164 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 PCDHGC3Q9UN70 934 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 MTCH2Q9Y6C9 303 aa12.63□□□□□ -0.39
COMMD9-208ENST00000533643 BZW2Q9Y6E2 419 aaKnown RBP12.63□□□□□ -0.39
COMMD9-208ENST00000533643 ATP8B3O60423 1300 aa12.62□□□□□ -0.39
COMMD9-208ENST00000533643 AP1G2O75843 785 aa12.62□□□□□ -0.39
COMMD9-208ENST00000533643 GLUD1P00367 558 aa12.62□□□□□ -0.39
COMMD9-208ENST00000533643 FAM200BP0CF97 657 aa12.62□□□□□ -0.39
COMMD9-208ENST00000533643 HAPLN1P10915 354 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms