RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 DDX20Q9UHI6 824 aaKnown RBP20.31■□□□□ 0.84
UBXN1-215ENST00000533476 H3BRB1 525 aa20.3■□□□□ 0.84
UBXN1-215ENST00000533476 HMGCRP04035 888 aa20.3■□□□□ 0.84
UBXN1-215ENST00000533476 INCA1Q0VD86 236 aa20.3■□□□□ 0.84
UBXN1-215ENST00000533476 ORC1Q13415 861 aa20.3■□□□□ 0.84
UBXN1-215ENST00000533476 HADHQ16836 314 aaKnown RBP20.3■□□□□ 0.84
UBXN1-215ENST00000533476 PRUNE1Q86TP1 453 aa20.3■□□□□ 0.84
UBXN1-215ENST00000533476 EXOC3L1Q86VI1 746 aa20.3■□□□□ 0.84
UBXN1-215ENST00000533476 NT5DC4Q86YG4 428 aa20.3■□□□□ 0.84
UBXN1-215ENST00000533476 ARFGAP1Q8N6T3 406 aa20.3■□□□□ 0.84
UBXN1-215ENST00000533476 NLRP7Q8WX94 980 aa20.3■□□□□ 0.84
UBXN1-215ENST00000533476 TUT1Q9H6E5 874 aaKnown RBP20.3■□□□□ 0.84
UBXN1-215ENST00000533476 INTS9Q9NV88 658 aaKnown RBP20.3■□□□□ 0.84
UBXN1-215ENST00000533476 NDC80O14777 642 aa20.29■□□□□ 0.84
UBXN1-215ENST00000533476 SNAI1O95863 264 aaPredicted RBP20.29■□□□□ 0.84
UBXN1-215ENST00000533476 ABHD2P08910 425 aa20.29■□□□□ 0.84
UBXN1-215ENST00000533476 VDRP11473 427 aa20.29■□□□□ 0.84
UBXN1-215ENST00000533476 HOXD8P13378 290 aaPredicted RBP20.29■□□□□ 0.84
UBXN1-215ENST00000533476 GCLCP48506 637 aaPredicted RBP20.29■□□□□ 0.84
UBXN1-215ENST00000533476 CNGA2Q16280 664 aa20.29■□□□□ 0.84
UBXN1-215ENST00000533476 TAZQ16635 292 aa20.29■□□□□ 0.84
UBXN1-215ENST00000533476 GLIS1Q8NBF1 620 aa20.29■□□□□ 0.84
UBXN1-215ENST00000533476 P3H4Q92791 437 aa20.29■□□□□ 0.84
UBXN1-215ENST00000533476 MCRS1Q96EZ8 462 aa20.29■□□□□ 0.84
UBXN1-215ENST00000533476 ZNF317Q96PQ6 595 aaPredicted RBP20.29■□□□□ 0.84
UBXN1-215ENST00000533476 FRMD8P1Q9BZ68 369 aaPredicted RBP20.29■□□□□ 0.84
UBXN1-215ENST00000533476 METTL5Q9NRN9 209 aaKnown RBP20.29■□□□□ 0.84
UBXN1-215ENST00000533476 LGALS13Q9UHV8 139 aa20.29■□□□□ 0.84
UBXN1-215ENST00000533476 SCN4AP35499 1836 aa20.29■□□□□ 0.84
UBXN1-215ENST00000533476 A0A1B0GUA9 196 aa20.29■□□□□ 0.84
UBXN1-215ENST00000533476 M0QYV0 167 aa20.29■□□□□ 0.84
UBXN1-215ENST00000533476 ARSEP51690 589 aa20.29■□□□□ 0.84
UBXN1-215ENST00000533476 RBP5P82980 135 aa20.29■□□□□ 0.84
UBXN1-215ENST00000533476 GRIK4Q16099 956 aa20.29■□□□□ 0.84
UBXN1-215ENST00000533476 ZNF410Q86VK4 478 aa20.29■□□□□ 0.84
UBXN1-215ENST00000533476 TTC39CQ8N584 583 aa20.29■□□□□ 0.84
UBXN1-215ENST00000533476 SLC35B2Q8TB61 432 aa20.29■□□□□ 0.84
UBXN1-215ENST00000533476 KAT2BQ92831 832 aa20.29■□□□□ 0.84
UBXN1-215ENST00000533476 MS4A4AQ96JQ5 239 aa20.29■□□□□ 0.84
UBXN1-215ENST00000533476 ACAP3Q96P50 834 aa20.29■□□□□ 0.84
UBXN1-215ENST00000533476 RBM15Q96T37 977 aaKnown RBP eCLIP20.29■□□□□ 0.84
UBXN1-215ENST00000533476 ZWILCHQ9H900 591 aa20.29■□□□□ 0.84
UBXN1-215ENST00000533476 ACTR5Q9H9F9 607 aaPredicted RBP20.29■□□□□ 0.84
UBXN1-215ENST00000533476 PCDH9Q9HC56 1237 aa20.29■□□□□ 0.84
UBXN1-215ENST00000533476 BARX2Q9UMQ3 279 aaPredicted RBP20.29■□□□□ 0.84
UBXN1-215ENST00000533476 AGAP1Q9UPQ3 857 aa20.29■□□□□ 0.84
UBXN1-215ENST00000533476 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.28■□□□□ 0.84
UBXN1-215ENST00000533476 BTBD19C9JJ37 291 aa20.28■□□□□ 0.84
UBXN1-215ENST00000533476 ITGBL1O95965 494 aaPredicted RBP20.28■□□□□ 0.84
UBXN1-215ENST00000533476 IL1R2P27930 398 aa20.28■□□□□ 0.84
UBXN1-215ENST00000533476 GPD2P43304 727 aa20.28■□□□□ 0.84
UBXN1-215ENST00000533476 ACAP1Q15027 740 aa20.28■□□□□ 0.84
UBXN1-215ENST00000533476 CCDC38Q502W7 563 aa20.28■□□□□ 0.84
UBXN1-215ENST00000533476 MARCH8Q5T0T0 291 aa20.28■□□□□ 0.84
UBXN1-215ENST00000533476 CPLX4Q7Z7G2 160 aa20.28■□□□□ 0.84
UBXN1-215ENST00000533476 KIAA0319LQ8IZA0 1049 aa20.28■□□□□ 0.84
UBXN1-215ENST00000533476 ARHGEF2Q92974 986 aaKnown RBP20.28■□□□□ 0.84
UBXN1-215ENST00000533476 SEC16BQ96JE7 1060 aa20.28■□□□□ 0.84
UBXN1-215ENST00000533476 ADPGKQ9BRR6 497 aa20.28■□□□□ 0.84
UBXN1-215ENST00000533476 DPP3Q9NY33 737 aa20.28■□□□□ 0.84
UBXN1-215ENST00000533476 TPX2Q9ULW0 747 aaKnown RBP20.28■□□□□ 0.84
UBXN1-215ENST00000533476 MAGEA4P43358 317 aa20.27■□□□□ 0.84
UBXN1-215ENST00000533476 GTF2A2P52657 109 aa20.27■□□□□ 0.84
UBXN1-215ENST00000533476 ACTN3Q08043 901 aaPredicted RBP20.27■□□□□ 0.84
UBXN1-215ENST00000533476 GPS1Q13098 491 aa20.27■□□□□ 0.84
UBXN1-215ENST00000533476 STAT4Q14765 748 aa20.27■□□□□ 0.84
UBXN1-215ENST00000533476 MORF4L2Q15014 288 aa20.27■□□□□ 0.84
UBXN1-215ENST00000533476 GKAP1Q5VSY0 366 aaPredicted RBP20.27■□□□□ 0.84
UBXN1-215ENST00000533476 BBS12Q6ZW61 710 aa20.27■□□□□ 0.84
UBXN1-215ENST00000533476 CACNA2D3Q8IZS8 1091 aa20.27■□□□□ 0.84
UBXN1-215ENST00000533476 HAUS1Q96CS2 278 aa20.27■□□□□ 0.84
UBXN1-215ENST00000533476 CAPN7Q9Y6W3 813 aa20.27■□□□□ 0.84
UBXN1-215ENST00000533476 CCL15-CCL14A0A0B4J2E2 113 aa20.27■□□□□ 0.84
UBXN1-215ENST00000533476 MMP3P08254 477 aa20.27■□□□□ 0.84
UBXN1-215ENST00000533476 ZSCAN5DPP0CG00 497 aa20.27■□□□□ 0.84
UBXN1-215ENST00000533476 KDELR1P24390 212 aa20.27■□□□□ 0.84
UBXN1-215ENST00000533476 GRM5P41594 1212 aa20.27■□□□□ 0.84
UBXN1-215ENST00000533476 IFT88Q13099 833 aa20.27■□□□□ 0.84
UBXN1-215ENST00000533476 CCL15Q16663 113 aa20.27■□□□□ 0.84
UBXN1-215ENST00000533476 DUSP28Q4G0W2 176 aa20.27■□□□□ 0.84
UBXN1-215ENST00000533476 ANKRD23Q86SG2 305 aa20.27■□□□□ 0.84
UBXN1-215ENST00000533476 EMC1Q8N766 993 aa20.27■□□□□ 0.84
UBXN1-215ENST00000533476 TTC13Q8NBP0 860 aa20.27■□□□□ 0.84
UBXN1-215ENST00000533476 HEXIM2Q96MH2 286 aaKnown RBP20.27■□□□□ 0.84
UBXN1-215ENST00000533476 CCDC77Q9BR77 488 aa20.27■□□□□ 0.84
UBXN1-215ENST00000533476 KIAA1257Q9ULG3 409 aa20.27■□□□□ 0.84
UBXN1-215ENST00000533476 SHOC2Q9UQ13 582 aa20.27■□□□□ 0.84
UBXN1-215ENST00000533476 RALGAPA2Q2PPJ7 1873 aa20.26■□□□□ 0.83
UBXN1-215ENST00000533476 SMPD1P17405 629 aa20.26■□□□□ 0.83
UBXN1-215ENST00000533476 SMTNL2Q2TAL5 461 aa20.26■□□□□ 0.83
UBXN1-215ENST00000533476 DCAF4L1Q3SXM0 396 aa20.26■□□□□ 0.83
UBXN1-215ENST00000533476 ICE2Q659A1 982 aa20.26■□□□□ 0.83
UBXN1-215ENST00000533476 MAP1SQ66K74 1059 aaPredicted RBP20.26■□□□□ 0.83
UBXN1-215ENST00000533476 CCDC121Q6ZUS5 278 aa20.26■□□□□ 0.83
UBXN1-215ENST00000533476 TAX1BP1Q86VP1 789 aa20.26■□□□□ 0.83
UBXN1-215ENST00000533476 C9orf72Q96LT7 481 aa20.26■□□□□ 0.83
UBXN1-215ENST00000533476 TTC25Q96NG3 672 aa20.26■□□□□ 0.83
UBXN1-215ENST00000533476 CTNNAL1Q9UBT7 734 aa20.26■□□□□ 0.83
UBXN1-215ENST00000533476 CITO14578 2027 aa20.26■□□□□ 0.83
UBXN1-215ENST00000533476 CDH16O75309 829 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms