RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 CLDN5O00501 218 aa12.76□□□□□ -0.37
SSBP3-214ENST00000533209 RHOP08100 348 aa12.76□□□□□ -0.37
SSBP3-214ENST00000533209 PTPN2P17706 415 aa12.76□□□□□ -0.37
SSBP3-214ENST00000533209 SLC9A1P19634 815 aa12.76□□□□□ -0.37
SSBP3-214ENST00000533209 BDNFP23560 247 aa12.76□□□□□ -0.37
SSBP3-214ENST00000533209 TBXAS1P24557 533 aaPredicted RBP12.76□□□□□ -0.37
SSBP3-214ENST00000533209 ZNF165P49910 485 aa12.76□□□□□ -0.37
SSBP3-214ENST00000533209 EPHB3P54753 998 aa12.76□□□□□ -0.37
SSBP3-214ENST00000533209 CYP27A1Q02318 531 aa12.76□□□□□ -0.37
SSBP3-214ENST00000533209 IQCB1Q15051 598 aa12.76□□□□□ -0.37
SSBP3-214ENST00000533209 EXOC3L4Q17RC7 722 aa12.76□□□□□ -0.37
SSBP3-214ENST00000533209 PABPC1LQ4VXU2 614 aaKnown RBP12.76□□□□□ -0.37
SSBP3-214ENST00000533209 PHLDB3Q6NSJ2 640 aa12.76□□□□□ -0.37
SSBP3-214ENST00000533209 TRIM65Q6PJ69 517 aa12.76□□□□□ -0.37
SSBP3-214ENST00000533209 GBP6Q6ZN66 633 aa12.76□□□□□ -0.37
SSBP3-214ENST00000533209 PAQR9Q6ZVX9 377 aa12.76□□□□□ -0.37
SSBP3-214ENST00000533209 HS6ST3Q8IZP7 471 aa12.76□□□□□ -0.37
SSBP3-214ENST00000533209 ELMOD1Q8N336 334 aa12.76□□□□□ -0.37
SSBP3-214ENST00000533209 PPM1KQ8N3J5 372 aa12.76□□□□□ -0.37
SSBP3-214ENST00000533209 ZNF512Q96ME7 567 aaPredicted RBP12.76□□□□□ -0.37
SSBP3-214ENST00000533209 CORO1BQ9BR76 489 aa12.76□□□□□ -0.37
SSBP3-214ENST00000533209 LRRC3Q9BY71 257 aa12.76□□□□□ -0.37
SSBP3-214ENST00000533209 ZNF518BQ9C0D4 1074 aa12.76□□□□□ -0.37
SSBP3-214ENST00000533209 AVENQ9NQS1 362 aaPredicted RBP12.76□□□□□ -0.37
SSBP3-214ENST00000533209 LIMA1Q9UHB6 759 aaKnown RBP12.76□□□□□ -0.37
SSBP3-214ENST00000533209 ASB3Q9Y575 518 aa12.76□□□□□ -0.37
SSBP3-214ENST00000533209 C2CD4DB7Z1M9 353 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 CCDC130P13994 396 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 ACO1P21399 889 aaKnown RBP12.75□□□□□ -0.37
SSBP3-214ENST00000533209 SP100P23497 879 aaPredicted RBP12.75□□□□□ -0.37
SSBP3-214ENST00000533209 FSHRP23945 695 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 PON1P27169 355 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 CACNA2D1P54289 1103 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 RAD23BP54727 409 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 EPHA5P54756 1037 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 YWHAEP62258 255 aaKnown RBP12.75□□□□□ -0.37
SSBP3-214ENST00000533209 RPL10AP62906 217 aaKnown RBP12.75□□□□□ -0.37
SSBP3-214ENST00000533209 APBA1Q02410 837 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 GCNT1Q02742 428 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 DDR2Q16832 855 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 SLC5A9Q2M3M2 681 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 ZNF394Q53GI3 561 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 SDHAF4Q5VUM1 108 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 IQCEQ6IPM2 695 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 DPY19L2P1Q6NXN4 242 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 VSTM1Q6UX27 236 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 RRAGAQ7L523 313 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 APTXQ7Z2E3 356 aaKnown RBP12.75□□□□□ -0.37
SSBP3-214ENST00000533209 FAM35AQ86V20 835 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 TMC8Q8IU68 726 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 FUKQ8N0W3 1084 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 C12orf29Q8N999 325 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 SLC4A11Q8NBS3 891 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 STKLD1Q8NE28 680 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 GPR152Q8TDT2 470 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 GIPC2Q8TF65 315 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 PSMG2Q969U7 264 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 RPGRIP1Q96KN7 1286 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 KREMEN1Q96MU8 473 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 MYADMQ96S97 322 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 UHRF1Q96T88 793 aaPredicted RBP12.75□□□□□ -0.37
SSBP3-214ENST00000533209 VPS16Q9H269 839 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 CBX8Q9HC52 389 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 ZNF334Q9HCZ1 680 aaPredicted RBP12.75□□□□□ -0.37
SSBP3-214ENST00000533209 SIX2Q9NPC8 291 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 CD320Q9NPF0 282 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 FAM49BQ9NUQ9 324 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 TMEM30AQ9NV96 361 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 USTQ9Y2C2 406 aa12.75□□□□□ -0.37
SSBP3-214ENST00000533209 C2orf16Q68DN1 1984 aa12.74□□□□□ -0.37
SSBP3-214ENST00000533209 LRRC10BA6NIK2 292 aa12.74□□□□□ -0.37
SSBP3-214ENST00000533209 SMTNL1A8MU46 457 aa12.74□□□□□ -0.37
SSBP3-214ENST00000533209 PES1O00541 588 aaKnown RBP12.74□□□□□ -0.37
SSBP3-214ENST00000533209 NRG2O14511 850 aaPredicted RBP12.74□□□□□ -0.37
SSBP3-214ENST00000533209 MOSPD3O75425 235 aa12.74□□□□□ -0.37
SSBP3-214ENST00000533209 ATP1A3P13637 1013 aa12.74□□□□□ -0.37
SSBP3-214ENST00000533209 CCR2P41597 374 aa12.74□□□□□ -0.37
SSBP3-214ENST00000533209 COPB1P53618 953 aaKnown RBP12.74□□□□□ -0.37
SSBP3-214ENST00000533209 KCNMA1Q12791 1236 aa12.74□□□□□ -0.37
SSBP3-214ENST00000533209 VEPH1Q14D04 833 aa12.74□□□□□ -0.37
SSBP3-214ENST00000533209 PRSS36Q5K4E3 855 aa12.74□□□□□ -0.37
SSBP3-214ENST00000533209 GJB7Q6PEY0 223 aa12.74□□□□□ -0.37
SSBP3-214ENST00000533209 GET4Q7L5D6 327 aaPredicted RBP12.74□□□□□ -0.37
SSBP3-214ENST00000533209 OTOP3Q7RTS5 596 aa12.74□□□□□ -0.37
SSBP3-214ENST00000533209 DNAJB7Q7Z6W7 309 aaPredicted RBP12.74□□□□□ -0.37
SSBP3-214ENST00000533209 ITIH5Q86UX2 942 aa12.74□□□□□ -0.37
SSBP3-214ENST00000533209 SCN4BQ8IWT1 228 aa12.74□□□□□ -0.37
SSBP3-214ENST00000533209 ITFG1Q8TB96 612 aa12.74□□□□□ -0.37
SSBP3-214ENST00000533209 SLC2A14Q8TDB8 520 aa12.74□□□□□ -0.37
SSBP3-214ENST00000533209 TCEAL4Q96EI5 215 aa12.74□□□□□ -0.37
SSBP3-214ENST00000533209 TMEM176AQ96HP8 235 aa12.74□□□□□ -0.37
SSBP3-214ENST00000533209 HNRNPABQ99729 332 aaKnown RBP12.74□□□□□ -0.37
SSBP3-214ENST00000533209 MED10Q9BTT4 135 aa12.74□□□□□ -0.37
SSBP3-214ENST00000533209 UBE2TQ9NPD8 197 aaPredicted RBP12.74□□□□□ -0.37
SSBP3-214ENST00000533209 ASAH2Q9NR71 780 aa12.74□□□□□ -0.37
SSBP3-214ENST00000533209 NR2E1Q9Y466 385 aa12.74□□□□□ -0.37
SSBP3-214ENST00000533209 TCF20Q9UGU0 1960 aaKnown RBP12.74□□□□□ -0.37
SSBP3-214ENST00000533209 BDP1A6H8Y1 2624 aa12.74□□□□□ -0.37
SSBP3-214ENST00000533209 ATP8B3O60423 1300 aa12.73□□□□□ -0.37
SSBP3-214ENST00000533209 SLC38A8A6NNN8 435 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms