RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 CEP295NLQ96MC4 621 aa25.11■■□□□ 1.61
SMPD1-209ENST00000533196 SYT15Q9BQS2 421 aa25.11■■□□□ 1.61
SMPD1-209ENST00000533196 C8orf33Q9H7E9 229 aaPredicted RBP25.11■■□□□ 1.61
SMPD1-209ENST00000533196 PTPRDP23468 1912 aa25.1■■□□□ 1.61
SMPD1-209ENST00000533196 A0A1W2PQ27 194 aa25.1■■□□□ 1.61
SMPD1-209ENST00000533196 A0A1W2PQ64 194 aa25.1■■□□□ 1.61
SMPD1-209ENST00000533196 A0A1W2PQD8 194 aa25.1■■□□□ 1.61
SMPD1-209ENST00000533196 LAMTOR5O43504 91 aa25.1■■□□□ 1.61
SMPD1-209ENST00000533196 TACC1O75410 805 aa25.1■■□□□ 1.61
SMPD1-209ENST00000533196 NOL4O94818 638 aa25.1■■□□□ 1.61
SMPD1-209ENST00000533196 KIF20AO95235 890 aa25.1■■□□□ 1.61
SMPD1-209ENST00000533196 F11P03951 625 aa25.1■■□□□ 1.61
SMPD1-209ENST00000533196 CYP2F1P24903 491 aa25.1■■□□□ 1.61
SMPD1-209ENST00000533196 ATICP31939 592 aa25.1■■□□□ 1.61
SMPD1-209ENST00000533196 CDR1P51861 262 aa25.1■■□□□ 1.61
SMPD1-209ENST00000533196 FZD5Q13467 585 aa25.1■■□□□ 1.61
SMPD1-209ENST00000533196 CMTM8Q8IZV2 173 aa25.1■■□□□ 1.61
SMPD1-209ENST00000533196 ZNF687Q8N1G0 1237 aa25.1■■□□□ 1.61
SMPD1-209ENST00000533196 CELF5Q8N6W0 485 aaKnown RBP25.1■■□□□ 1.61
SMPD1-209ENST00000533196 BPIFB1Q8TDL5 484 aa25.1■■□□□ 1.61
SMPD1-209ENST00000533196 CCDC47Q96A33 483 aaKnown RBP25.1■■□□□ 1.61
SMPD1-209ENST00000533196 MMS19Q96T76 1030 aa25.1■■□□□ 1.61
SMPD1-209ENST00000533196 SLC46A2Q9BY10 475 aa25.1■■□□□ 1.61
SMPD1-209ENST00000533196 USP34Q70CQ2 3546 aa25.1■■□□□ 1.61
SMPD1-209ENST00000533196 KIF26AQ9ULI4 1882 aaPredicted RBP25.09■■□□□ 1.61
SMPD1-209ENST00000533196 MYBPHLA2RUH7 354 aa25.09■■□□□ 1.61
SMPD1-209ENST00000533196 PDXKO00764 312 aa25.09■■□□□ 1.61
SMPD1-209ENST00000533196 CST3P01034 146 aaPredicted RBP25.09■■□□□ 1.61
SMPD1-209ENST00000533196 TRPC3Q13507 836 aa25.09■■□□□ 1.61
SMPD1-209ENST00000533196 VSTM1Q6UX27 236 aa25.09■■□□□ 1.61
SMPD1-209ENST00000533196 MAMSTRQ6ZN01 415 aa25.09■■□□□ 1.61
SMPD1-209ENST00000533196 TMEM150AQ86TG1 271 aa25.09■■□□□ 1.61
SMPD1-209ENST00000533196 MRPS31Q92665 395 aaKnown RBP25.09■■□□□ 1.61
SMPD1-209ENST00000533196 KIF9Q9HAQ2 790 aa25.09■■□□□ 1.61
SMPD1-209ENST00000533196 DMAC2Q9NW81 257 aa25.09■■□□□ 1.61
SMPD1-209ENST00000533196 THG1LQ9NWX6 298 aaKnown RBP25.09■■□□□ 1.61
SMPD1-209ENST00000533196 MAGEC2Q9UBF1 373 aaPredicted RBP25.09■■□□□ 1.61
SMPD1-209ENST00000533196 GREB1Q4ZG55 1949 aa25.09■■□□□ 1.61
SMPD1-209ENST00000533196 AVPR1AP37288 418 aa25.08■■□□□ 1.61
SMPD1-209ENST00000533196 GPR15P49685 360 aa25.08■■□□□ 1.61
SMPD1-209ENST00000533196 CLDN10P78369 228 aa25.08■■□□□ 1.61
SMPD1-209ENST00000533196 DDR2Q16832 855 aa25.08■■□□□ 1.61
SMPD1-209ENST00000533196 MAML2Q8IZL2 1156 aaPredicted RBP25.08■■□□□ 1.61
SMPD1-209ENST00000533196 SYAP1Q96A49 352 aaPredicted RBP25.08■■□□□ 1.61
SMPD1-209ENST00000533196 GZF1Q9H116 711 aaPredicted RBP25.08■■□□□ 1.61
SMPD1-209ENST00000533196 MAGED2Q9UNF1 606 aaPredicted RBP25.08■■□□□ 1.61
SMPD1-209ENST00000533196 MYO15AQ9UKN7 3530 aa25.07■■□□□ 1.6
SMPD1-209ENST00000533196 SLC38A8A6NNN8 435 aa25.07■■□□□ 1.6
SMPD1-209ENST00000533196 PRAMEF12O95522 483 aa25.07■■□□□ 1.6
SMPD1-209ENST00000533196 RPN1P04843 607 aaKnown RBP25.07■■□□□ 1.6
SMPD1-209ENST00000533196 LMO2P25791 158 aa25.07■■□□□ 1.6
SMPD1-209ENST00000533196 TNNC1P63316 161 aa25.07■■□□□ 1.6
SMPD1-209ENST00000533196 WDR72Q3MJ13 1102 aa25.07■■□□□ 1.6
SMPD1-209ENST00000533196 MON1AQ86VX9 555 aa25.07■■□□□ 1.6
SMPD1-209ENST00000533196 PARD3BQ8TEW8 1205 aa25.07■■□□□ 1.6
SMPD1-209ENST00000533196 ZNF516Q92618 1163 aa25.07■■□□□ 1.6
SMPD1-209ENST00000533196 LRRC3BQ96PB8 259 aa25.07■■□□□ 1.6
SMPD1-209ENST00000533196 CHRDQ9H2X0 955 aa25.07■■□□□ 1.6
SMPD1-209ENST00000533196 SNX25Q9H3E2 840 aa25.07■■□□□ 1.6
SMPD1-209ENST00000533196 KCTD10Q9H3F6 313 aa25.07■■□□□ 1.6
SMPD1-209ENST00000533196 VRTNQ9H8Y1 702 aa25.07■■□□□ 1.6
SMPD1-209ENST00000533196 NDRG2Q9UN36 371 aaKnown RBP25.07■■□□□ 1.6
SMPD1-209ENST00000533196 ANAPC1Q9H1A4 1944 aa25.06■■□□□ 1.6
SMPD1-209ENST00000533196 HCRTO43612 131 aa25.06■■□□□ 1.6
SMPD1-209ENST00000533196 GNL1P36915 607 aaPredicted RBP25.06■■□□□ 1.6
SMPD1-209ENST00000533196 NDUFA8P51970 172 aa25.06■■□□□ 1.6
SMPD1-209ENST00000533196 KPNA1P52294 538 aaPredicted RBP25.06■■□□□ 1.6
SMPD1-209ENST00000533196 ZNF268Q14587 947 aaPredicted RBP25.06■■□□□ 1.6
SMPD1-209ENST00000533196 SDHAF4Q5VUM1 108 aa25.06■■□□□ 1.6
SMPD1-209ENST00000533196 RALGPS2Q86X27 583 aaPredicted RBP25.06■■□□□ 1.6
SMPD1-209ENST00000533196 MAB21L3Q8N8X9 362 aa25.06■■□□□ 1.6
SMPD1-209ENST00000533196 MYCBPAPQ8TBZ2 947 aa25.06■■□□□ 1.6
SMPD1-209ENST00000533196 MYLPFQ96A32 169 aa25.06■■□□□ 1.6
SMPD1-209ENST00000533196 SPATA17Q96L03 361 aa25.06■■□□□ 1.6
SMPD1-209ENST00000533196 CRTAC1Q9NQ79 661 aa25.06■■□□□ 1.6
SMPD1-209ENST00000533196 EHD2Q9NZN4 543 aa25.06■■□□□ 1.6
SMPD1-209ENST00000533196 PHACTR2O75167 634 aa25.05■■□□□ 1.6
SMPD1-209ENST00000533196 RHOBTB3O94955 611 aa25.05■■□□□ 1.6
SMPD1-209ENST00000533196 LMNAP02545 664 aaKnown RBP25.05■■□□□ 1.6
SMPD1-209ENST00000533196 BECN1Q14457 450 aa25.05■■□□□ 1.6
SMPD1-209ENST00000533196 GPIHBP1Q8IV16 184 aa25.05■■□□□ 1.6
SMPD1-209ENST00000533196 SCN4BQ8IWT1 228 aa25.05■■□□□ 1.6
SMPD1-209ENST00000533196 CCDC34Q96HJ3 373 aa25.05■■□□□ 1.6
SMPD1-209ENST00000533196 MRPL45Q9BRJ2 306 aaKnown RBP25.05■■□□□ 1.6
SMPD1-209ENST00000533196 XYLT2Q9H1B5 865 aa25.05■■□□□ 1.6
SMPD1-209ENST00000533196 PRMT8Q9NR22 394 aaPredicted RBP25.05■■□□□ 1.6
SMPD1-209ENST00000533196 TDP1Q9NUW8 608 aa25.05■■□□□ 1.6
SMPD1-209ENST00000533196 TRAF3IP3Q9Y228 551 aa25.05■■□□□ 1.6
SMPD1-209ENST00000533196 GVINP1Q7Z2Y8 2422 aa25.04■■□□□ 1.6
SMPD1-209ENST00000533196 CALUO43852 315 aaPredicted RBP25.04■■□□□ 1.6
SMPD1-209ENST00000533196 ATP2C2O75185 946 aa25.04■■□□□ 1.6
SMPD1-209ENST00000533196 NR3C1P04150 777 aa25.04■■□□□ 1.6
SMPD1-209ENST00000533196 PDGFRBP09619 1106 aa25.04■■□□□ 1.6
SMPD1-209ENST00000533196 CCNE1P24864 410 aa25.04■■□□□ 1.6
SMPD1-209ENST00000533196 MYL6P60660 151 aa25.04■■□□□ 1.6
SMPD1-209ENST00000533196 PSMC1P62191 440 aaKnown RBP25.04■■□□□ 1.6
SMPD1-209ENST00000533196 LRRC32Q14392 662 aa25.04■■□□□ 1.6
SMPD1-209ENST00000533196 CCDC142Q17RM4 750 aa25.04■■□□□ 1.6
SMPD1-209ENST00000533196 KRBA2Q6ZNG9 492 aa25.04■■□□□ 1.6
SMPD1-209ENST00000533196 FSIP1Q8NA03 581 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms