RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 SDHAF4Q5VUM1 108 aa16.41■□□□□ 0.22
CPSF1-210ENST00000532935 TANGO2Q6ICL3 276 aa16.41■□□□□ 0.22
CPSF1-210ENST00000532935 ELSPBP1Q96BH3 223 aa16.41■□□□□ 0.22
CPSF1-210ENST00000532935 GPR88Q9GZN0 384 aa16.41■□□□□ 0.22
CPSF1-210ENST00000532935 ATXN3LQ9H3M9 355 aa16.41■□□□□ 0.22
CPSF1-210ENST00000532935 DPEP3Q9H4B8 488 aa16.41■□□□□ 0.22
CPSF1-210ENST00000532935 SLITRK6Q9H5Y7 841 aa16.41■□□□□ 0.22
CPSF1-210ENST00000532935 TMEM8AQ9HCN3 771 aa16.41■□□□□ 0.22
CPSF1-210ENST00000532935 SLC2A4RGQ9NR83 387 aa16.41■□□□□ 0.22
CPSF1-210ENST00000532935 WNT16Q9UBV4 365 aa16.41■□□□□ 0.22
CPSF1-210ENST00000532935 A8MXQ7 604 aa16.4■□□□□ 0.22
CPSF1-210ENST00000532935 PPP1R3GB7ZBB8 358 aa16.4■□□□□ 0.22
CPSF1-210ENST00000532935 HMGA1P17096 107 aaKnown RBP16.4■□□□□ 0.22
CPSF1-210ENST00000532935 PTPN1P18031 435 aaKnown RBP16.4■□□□□ 0.22
CPSF1-210ENST00000532935 CDC25CP30307 473 aa16.4■□□□□ 0.22
CPSF1-210ENST00000532935 GTF2H1P32780 548 aa16.4■□□□□ 0.22
CPSF1-210ENST00000532935 GPC5P78333 572 aa16.4■□□□□ 0.22
CPSF1-210ENST00000532935 CYP27A1Q02318 531 aa16.4■□□□□ 0.22
CPSF1-210ENST00000532935 MDH1BQ5I0G3 518 aa16.4■□□□□ 0.22
CPSF1-210ENST00000532935 STXBP5Q5T5C0 1151 aa16.4■□□□□ 0.22
CPSF1-210ENST00000532935 SPOPLQ6IQ16 392 aa16.4■□□□□ 0.22
CPSF1-210ENST00000532935 KLHL10Q6JEL2 608 aa16.4■□□□□ 0.22
CPSF1-210ENST00000532935 SCN4BQ8IWT1 228 aa16.4■□□□□ 0.22
CPSF1-210ENST00000532935 SIX5Q8N196 739 aa16.4■□□□□ 0.22
CPSF1-210ENST00000532935 STKLD1Q8NE28 680 aa16.4■□□□□ 0.22
CPSF1-210ENST00000532935 ZSCAN18Q8TBC5 510 aaPredicted RBP16.4■□□□□ 0.22
CPSF1-210ENST00000532935 TAS1R2Q8TE23 839 aa16.4■□□□□ 0.22
CPSF1-210ENST00000532935 SMARCD2Q92925 531 aa16.4■□□□□ 0.22
CPSF1-210ENST00000532935 PCED1BQ96HM7 432 aa16.4■□□□□ 0.22
CPSF1-210ENST00000532935 GCNAQ96QF7 691 aa16.4■□□□□ 0.22
CPSF1-210ENST00000532935 PLA2G2FQ9BZM2 168 aa16.4■□□□□ 0.22
CPSF1-210ENST00000532935 SDCBP2Q9H190 292 aa16.4■□□□□ 0.22
CPSF1-210ENST00000532935 MFSD1Q9H3U5 465 aa16.4■□□□□ 0.22
CPSF1-210ENST00000532935 IL21Q9HBE4 155 aa16.4■□□□□ 0.22
CPSF1-210ENST00000532935 ZFP14Q9HCL3 533 aa16.4■□□□□ 0.22
CPSF1-210ENST00000532935 TICRRQ7Z2Z1 1910 aa16.4■□□□□ 0.22
CPSF1-210ENST00000532935 MIA3Q5JRA6 1907 aa16.39■□□□□ 0.21
CPSF1-210ENST00000532935 STX10O60499 249 aa16.39■□□□□ 0.21
CPSF1-210ENST00000532935 CSH1P0DML2 217 aa16.39■□□□□ 0.21
CPSF1-210ENST00000532935 CSH2P0DML3 217 aa16.39■□□□□ 0.21
CPSF1-210ENST00000532935 BDNFP23560 247 aa16.39■□□□□ 0.21
CPSF1-210ENST00000532935 ASPAP45381 313 aa16.39■□□□□ 0.21
CPSF1-210ENST00000532935 CAMK4Q16566 473 aa16.39■□□□□ 0.21
CPSF1-210ENST00000532935 ARHGAP15Q53QZ3 475 aa16.39■□□□□ 0.21
CPSF1-210ENST00000532935 KRT39Q6A163 491 aa16.39■□□□□ 0.21
CPSF1-210ENST00000532935 VSTM1Q6UX27 236 aa16.39■□□□□ 0.21
CPSF1-210ENST00000532935 CLEC17AQ6ZS10 378 aa16.39■□□□□ 0.21
CPSF1-210ENST00000532935 B3GALNT2Q8NCR0 500 aa16.39■□□□□ 0.21
CPSF1-210ENST00000532935 NELFBQ8WX92 580 aa16.39■□□□□ 0.21
CPSF1-210ENST00000532935 IMPG2Q9BZV3 1241 aa16.39■□□□□ 0.21
CPSF1-210ENST00000532935 TRPV4Q9HBA0 871 aa16.39■□□□□ 0.21
CPSF1-210ENST00000532935 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.39■□□□□ 0.217e-6■■■■■ 74.5
CPSF1-210ENST00000532935 KIAA1468Q9P260 1216 aa16.39■□□□□ 0.21
CPSF1-210ENST00000532935 CA14Q9ULX7 337 aa16.39■□□□□ 0.21
CPSF1-210ENST00000532935 MAGED2Q9UNF1 606 aaPredicted RBP16.39■□□□□ 0.21
CPSF1-210ENST00000532935 MUC6Q6W4X9 2439 aa16.39■□□□□ 0.21
CPSF1-210ENST00000532935 KRBA1A5PL33 1030 aa16.38■□□□□ 0.21
CPSF1-210ENST00000532935 SLC38A8A6NNN8 435 aa16.38■□□□□ 0.21
CPSF1-210ENST00000532935 NOL4O94818 638 aa16.38■□□□□ 0.21
CPSF1-210ENST00000532935 F11P03951 625 aa16.38■□□□□ 0.21
CPSF1-210ENST00000532935 VIPR2P41587 438 aa16.38■□□□□ 0.21
CPSF1-210ENST00000532935 MXI1P50539 228 aa16.38■□□□□ 0.21
CPSF1-210ENST00000532935 VCPP55072 806 aaKnown RBP16.38■□□□□ 0.21
CPSF1-210ENST00000532935 NLRP12P59046 1061 aa16.38■□□□□ 0.21
CPSF1-210ENST00000532935 NOP14P78316 857 aaKnown RBP16.38■□□□□ 0.21
CPSF1-210ENST00000532935 CYP4F8P98187 520 aa16.38■□□□□ 0.21
CPSF1-210ENST00000532935 DCAF17Q5H9S7 520 aaPredicted RBP16.38■□□□□ 0.21
CPSF1-210ENST00000532935 GPR158Q5T848 1215 aa16.38■□□□□ 0.21
CPSF1-210ENST00000532935 TTI2Q6NXR4 508 aa16.38■□□□□ 0.21
CPSF1-210ENST00000532935 CEP63Q96MT8 703 aa16.38■□□□□ 0.21
CPSF1-210ENST00000532935 DUSP9Q99956 384 aaKnown RBP16.38■□□□□ 0.21
CPSF1-210ENST00000532935 BCO2Q9BYV7 579 aa16.38■□□□□ 0.21
CPSF1-210ENST00000532935 APOBEC3GQ9HC16 384 aaKnown RBP16.38■□□□□ 0.21
CPSF1-210ENST00000532935 ARMCX3Q9UH62 379 aaPredicted RBP16.38■□□□□ 0.21
CPSF1-210ENST00000532935 CTNND2Q9UQB3 1225 aa16.38■□□□□ 0.21
CPSF1-210ENST00000532935 HELZP42694 1942 aaKnown RBP16.38■□□□□ 0.21
CPSF1-210ENST00000532935 COL4A2P08572 1712 aa16.38■□□□□ 0.21
CPSF1-210ENST00000532935 BICDL2A1A5D9 508 aa16.37■□□□□ 0.21
CPSF1-210ENST00000532935 TRIM66O15016 1216 aa16.37■□□□□ 0.21
CPSF1-210ENST00000532935 NPR3P17342 541 aa16.37■□□□□ 0.21
CPSF1-210ENST00000532935 GRIK1P39086 918 aa16.37■□□□□ 0.21
CPSF1-210ENST00000532935 PFKPQ01813 784 aa16.37■□□□□ 0.21
CPSF1-210ENST00000532935 TCERG1LQ5VWI1 586 aa16.37■□□□□ 0.21
CPSF1-210ENST00000532935 CWF19L1Q69YN2 538 aaKnown RBP16.37■□□□□ 0.21
CPSF1-210ENST00000532935 FOXR2Q6PJQ5 311 aa16.37■□□□□ 0.21
CPSF1-210ENST00000532935 VITQ6UXI7 678 aa16.37■□□□□ 0.21
CPSF1-210ENST00000532935 TMEM150AQ86TG1 271 aa16.37■□□□□ 0.21
CPSF1-210ENST00000532935 TRIML1Q8N9V2 468 aa16.37■□□□□ 0.21
CPSF1-210ENST00000532935 CCDC150Q8NCX0 1101 aa16.37■□□□□ 0.21
CPSF1-210ENST00000532935 FLCNQ8NFG4 579 aa16.37■□□□□ 0.21
CPSF1-210ENST00000532935 SEMA4DQ92854 862 aa16.37■□□□□ 0.21
CPSF1-210ENST00000532935 TRMT2BQ96GJ1 504 aaKnown RBP16.37■□□□□ 0.21
CPSF1-210ENST00000532935 TNIP3Q96KP6 325 aa16.37■□□□□ 0.21
CPSF1-210ENST00000532935 SPATA17Q96L03 361 aa16.37■□□□□ 0.21
CPSF1-210ENST00000532935 MYRFLQ96LU7 910 aa16.37■□□□□ 0.21
CPSF1-210ENST00000532935 B3GNT5Q9BYG0 378 aa16.37■□□□□ 0.21
CPSF1-210ENST00000532935 ELOVL4Q9GZR5 314 aa16.37■□□□□ 0.21
CPSF1-210ENST00000532935 NIF3L1Q9GZT8 377 aa16.37■□□□□ 0.21
CPSF1-210ENST00000532935 TASP1Q9H6P5 420 aa16.37■□□□□ 0.21
CPSF1-210ENST00000532935 ARHGEF3Q9NR81 526 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms