RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 C4orf50Q6ZRC1 276 aa26.43■■□□□ 1.82
USP48-214ENST00000532737 RRAGAQ7L523 313 aa26.43■■□□□ 1.82
USP48-214ENST00000532737 PPM1KQ8N3J5 372 aa26.43■■□□□ 1.82
USP48-214ENST00000532737 UBR7Q8N806 425 aa26.43■■□□□ 1.82
USP48-214ENST00000532737 TNIP3Q96KP6 325 aa26.43■■□□□ 1.82
USP48-214ENST00000532737 LRFN3Q9BTN0 628 aa26.43■■□□□ 1.82
USP48-214ENST00000532737 NT5C1AQ9BXI3 368 aa26.43■■□□□ 1.82
USP48-214ENST00000532737 B3GNT5Q9BYG0 378 aa26.43■■□□□ 1.82
USP48-214ENST00000532737 POMKQ9H5K3 350 aa26.43■■□□□ 1.82
USP48-214ENST00000532737 PON1P27169 355 aa26.42■■□□□ 1.82
USP48-214ENST00000532737 ALDH1A3P47895 512 aa26.42■■□□□ 1.82
USP48-214ENST00000532737 COPB1P53618 953 aaKnown RBP26.42■■□□□ 1.82
USP48-214ENST00000532737 CYP27A1Q02318 531 aa26.42■■□□□ 1.82
USP48-214ENST00000532737 APBA1Q02410 837 aa26.42■■□□□ 1.82
USP48-214ENST00000532737 CFAP221Q4G0U5 840 aa26.42■■□□□ 1.82
USP48-214ENST00000532737 ZNF394Q53GI3 561 aa26.42■■□□□ 1.82
USP48-214ENST00000532737 TRIM65Q6PJ69 517 aa26.42■■□□□ 1.82
USP48-214ENST00000532737 GRASPQ7Z6J2 395 aaPredicted RBP26.42■■□□□ 1.82
USP48-214ENST00000532737 TTC39CQ8N584 583 aa26.42■■□□□ 1.82
USP48-214ENST00000532737 FUBP3Q96I24 572 aaKnown RBP eCLIP26.42■■□□□ 1.82
USP48-214ENST00000532737 NECTIN4Q96NY8 510 aa26.42■■□□□ 1.82
USP48-214ENST00000532737 HCFC1R1Q9NWW0 138 aa26.42■■□□□ 1.82
USP48-214ENST00000532737 DNMT3BQ9UBC3 853 aaKnown RBP26.42■■□□□ 1.82
USP48-214ENST00000532737 BECN2A8MW95 431 aa26.41■■□□□ 1.82
USP48-214ENST00000532737 CLDN5O00501 218 aa26.41■■□□□ 1.82
USP48-214ENST00000532737 CAVIN2O95810 425 aa26.41■■□□□ 1.82
USP48-214ENST00000532737 ATF6P18850 670 aa26.41■■□□□ 1.82
USP48-214ENST00000532737 GPR15P49685 360 aa26.41■■□□□ 1.82
USP48-214ENST00000532737 NTHL1P78549 312 aa26.41■■□□□ 1.82
USP48-214ENST00000532737 GJB7Q6PEY0 223 aa26.41■■□□□ 1.82
USP48-214ENST00000532737 APTXQ7Z2E3 356 aaKnown RBP26.41■■□□□ 1.82
USP48-214ENST00000532737 LUZP1Q86V48 1076 aa26.41■■□□□ 1.82
USP48-214ENST00000532737 C12orf29Q8N999 325 aa26.41■■□□□ 1.82
USP48-214ENST00000532737 ANKRD20A12PQ8NF67 263 aa26.41■■□□□ 1.82
USP48-214ENST00000532737 KREMEN1Q96MU8 473 aa26.41■■□□□ 1.82
USP48-214ENST00000532737 FAM124BQ9H5Z6 455 aaPredicted RBP26.41■■□□□ 1.82
USP48-214ENST00000532737 WDR6Q9NNW5 1121 aaKnown RBP26.41■■□□□ 1.82
USP48-214ENST00000532737 C11orf16Q9NQ32 467 aa26.41■■□□□ 1.82
USP48-214ENST00000532737 LRRC10BA6NIK2 292 aa26.4■■□□□ 1.82
USP48-214ENST00000532737 ACO1P21399 889 aaKnown RBP26.4■■□□□ 1.82
USP48-214ENST00000532737 BDNFP23560 247 aa26.4■■□□□ 1.82
USP48-214ENST00000532737 PLA2G5P39877 138 aa26.4■■□□□ 1.82
USP48-214ENST00000532737 MAGEA11P43364 429 aa26.4■■□□□ 1.82
USP48-214ENST00000532737 RAD23BP54727 409 aa26.4■■□□□ 1.82
USP48-214ENST00000532737 EPHB3P54753 998 aa26.4■■□□□ 1.82
USP48-214ENST00000532737 GCNT1Q02742 428 aa26.4■■□□□ 1.82
USP48-214ENST00000532737 KCNMA1Q12791 1236 aa26.4■■□□□ 1.82
USP48-214ENST00000532737 PLD1Q13393 1074 aa26.4■■□□□ 1.82
USP48-214ENST00000532737 DDR2Q16832 855 aa26.4■■□□□ 1.82
USP48-214ENST00000532737 DPY19L2P1Q6NXN4 242 aa26.4■■□□□ 1.82
USP48-214ENST00000532737 PAQR9Q6ZVX9 377 aa26.4■■□□□ 1.82
USP48-214ENST00000532737 ZNF518BQ9C0D4 1074 aa26.4■■□□□ 1.82
USP48-214ENST00000532737 SIX2Q9NPC8 291 aa26.4■■□□□ 1.82
USP48-214ENST00000532737 UBE2TQ9NPD8 197 aaPredicted RBP26.4■■□□□ 1.82
USP48-214ENST00000532737 TPM2P07951 284 aa26.39■■□□□ 1.82
USP48-214ENST00000532737 CCDC130P13994 396 aa26.39■■□□□ 1.82
USP48-214ENST00000532737 YWHAEP62258 255 aaKnown RBP26.39■■□□□ 1.82
USP48-214ENST00000532737 SDHAF4Q5VUM1 108 aa26.39■■□□□ 1.82
USP48-214ENST00000532737 LRSAM1Q6UWE0 723 aa26.39■■□□□ 1.82
USP48-214ENST00000532737 FUKQ8N0W3 1084 aa26.39■■□□□ 1.82
USP48-214ENST00000532737 SLC4A11Q8NBS3 891 aa26.39■■□□□ 1.82
USP48-214ENST00000532737 GPR152Q8TDT2 470 aa26.39■■□□□ 1.82
USP48-214ENST00000532737 GIPC2Q8TF65 315 aa26.39■■□□□ 1.82
USP48-214ENST00000532737 ZNF512Q96ME7 567 aaPredicted RBP26.39■■□□□ 1.82
USP48-214ENST00000532737 PHF7Q9BWX1 381 aaPredicted RBP26.39■■□□□ 1.82
USP48-214ENST00000532737 FAM49BQ9NUQ9 324 aa26.39■■□□□ 1.82
USP48-214ENST00000532737 PTPN2P17706 415 aa26.38■■□□□ 1.81
USP48-214ENST00000532737 CACNA2D1P54289 1103 aa26.38■■□□□ 1.81
USP48-214ENST00000532737 TMEM31Q5JXX7 168 aa26.38■■□□□ 1.81
USP48-214ENST00000532737 SCN4BQ8IWT1 228 aa26.38■■□□□ 1.81
USP48-214ENST00000532737 HS6ST3Q8IZP7 471 aa26.38■■□□□ 1.81
USP48-214ENST00000532737 ELMOD1Q8N336 334 aa26.38■■□□□ 1.81
USP48-214ENST00000532737 FAM200AQ8TCP9 573 aa26.38■■□□□ 1.81
USP48-214ENST00000532737 TMEM176AQ96HP8 235 aa26.38■■□□□ 1.81
USP48-214ENST00000532737 CORO1BQ9BR76 489 aa26.38■■□□□ 1.81
USP48-214ENST00000532737 CLUHO75153 1309 aa26.38■■□□□ 1.81
USP48-214ENST00000532737 PI4K2BG5E9Z4 385 aa26.37■■□□□ 1.81
USP48-214ENST00000532737 RPL10AP62906 217 aaKnown RBP26.37■■□□□ 1.81
USP48-214ENST00000532737 IQCEQ6IPM2 695 aa26.37■■□□□ 1.81
USP48-214ENST00000532737 VSTM1Q6UX27 236 aa26.37■■□□□ 1.81
USP48-214ENST00000532737 DNAJB7Q7Z6W7 309 aaPredicted RBP26.37■■□□□ 1.81
USP48-214ENST00000532737 FAM35AQ86V20 835 aa26.37■■□□□ 1.81
USP48-214ENST00000532737 SLC2A14Q8TDB8 520 aa26.37■■□□□ 1.81
USP48-214ENST00000532737 HEXIM2Q96MH2 286 aaKnown RBP26.37■■□□□ 1.81
USP48-214ENST00000532737 MED10Q9BTT4 135 aa26.37■■□□□ 1.81
USP48-214ENST00000532737 TSPY26PQ9H489 355 aa26.37■■□□□ 1.81
USP48-214ENST00000532737 TMEM30AQ9NV96 361 aa26.37■■□□□ 1.81
USP48-214ENST00000532737 APEX2Q9UBZ4 518 aa26.37■■□□□ 1.81
USP48-214ENST00000532737 ASB3Q9Y575 518 aa26.37■■□□□ 1.81
USP48-214ENST00000532737 PCDHB4Q9Y5E5 795 aa26.37■■□□□ 1.81
USP48-214ENST00000532737 C2orf16Q68DN1 1984 aa26.37■■□□□ 1.81
USP48-214ENST00000532737 LGALS16A8MUM7 142 aa26.36■■□□□ 1.81
USP48-214ENST00000532737 RNF225M0QZC1 329 aaPredicted RBP26.36■■□□□ 1.81
USP48-214ENST00000532737 GPR37L1O60883 481 aa26.36■■□□□ 1.81
USP48-214ENST00000532737 RHOP08100 348 aa26.36■■□□□ 1.81
USP48-214ENST00000532737 PABPC1LQ4VXU2 614 aaKnown RBP26.36■■□□□ 1.81
USP48-214ENST00000532737 FKBP15Q5T1M5 1219 aa26.36■■□□□ 1.81
USP48-214ENST00000532737 TMEM270Q6UE05 265 aa26.36■■□□□ 1.81
USP48-214ENST00000532737 STKLD1Q8NE28 680 aa26.36■■□□□ 1.81
USP48-214ENST00000532737 PSMG2Q969U7 264 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms