RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 MAN2B1O00754 1011 aa18.42■□□□□ 0.54
PHRF1-204ENST00000532550 NCAM2O15394 837 aa18.42■□□□□ 0.54
PHRF1-204ENST00000532550 C4BPAP04003 597 aaKnown RBP18.42■□□□□ 0.54
PHRF1-204ENST00000532550 HMGA1P17096 107 aaKnown RBP18.42■□□□□ 0.54
PHRF1-204ENST00000532550 WEE1P30291 646 aa18.42■□□□□ 0.54
PHRF1-204ENST00000532550 PSMC1P62191 440 aaKnown RBP18.42■□□□□ 0.54
PHRF1-204ENST00000532550 ANGPT1Q15389 498 aa18.42■□□□□ 0.54
PHRF1-204ENST00000532550 GUF1Q8N442 669 aaKnown RBP18.42■□□□□ 0.54
PHRF1-204ENST00000532550 TMC2Q8TDI7 906 aa18.42■□□□□ 0.54
PHRF1-204ENST00000532550 MKNK1Q9BUB5 465 aa18.42■□□□□ 0.54
PHRF1-204ENST00000532550 SLC46A2Q9BY10 475 aa18.42■□□□□ 0.54
PHRF1-204ENST00000532550 BCO2Q9BYV7 579 aa18.42■□□□□ 0.54
PHRF1-204ENST00000532550 TRPV5Q9NQA5 729 aa18.42■□□□□ 0.54
PHRF1-204ENST00000532550 UXTQ9UBK9 157 aaPredicted RBP18.42■□□□□ 0.54
PHRF1-204ENST00000532550 SLC38A8A6NNN8 435 aa18.41■□□□□ 0.54
PHRF1-204ENST00000532550 IKBKBO14920 756 aa18.41■□□□□ 0.54
PHRF1-204ENST00000532550 CHADO15335 359 aa18.41■□□□□ 0.54
PHRF1-204ENST00000532550 F11P03951 625 aa18.41■□□□□ 0.54
PHRF1-204ENST00000532550 RPL13P26373 211 aaKnown RBP18.41■□□□□ 0.54
PHRF1-204ENST00000532550 GRIK1P39086 918 aa18.41■□□□□ 0.54
PHRF1-204ENST00000532550 MAGEA11P43364 429 aa18.41■□□□□ 0.54
PHRF1-204ENST00000532550 NLRP12P59046 1061 aa18.41■□□□□ 0.54
PHRF1-204ENST00000532550 CYP27A1Q02318 531 aa18.41■□□□□ 0.54
PHRF1-204ENST00000532550 NCOA4Q13772 614 aa18.41■□□□□ 0.54
PHRF1-204ENST00000532550 CCDC142Q17RM4 750 aa18.41■□□□□ 0.54
PHRF1-204ENST00000532550 ZNF667Q5HYK9 610 aa18.41■□□□□ 0.54
PHRF1-204ENST00000532550 TDRD10Q5VZ19 366 aaKnown RBP18.41■□□□□ 0.54
PHRF1-204ENST00000532550 VSTM1Q6UX27 236 aa18.41■□□□□ 0.54
PHRF1-204ENST00000532550 FMR1NBQ8N0W7 255 aaPredicted RBP18.41■□□□□ 0.54
PHRF1-204ENST00000532550 MYCBPAPQ8TBZ2 947 aa18.41■□□□□ 0.54
PHRF1-204ENST00000532550 CSGALNACT1Q8TDX6 532 aa18.41■□□□□ 0.54
PHRF1-204ENST00000532550 MRPS31Q92665 395 aaKnown RBP18.41■□□□□ 0.54
PHRF1-204ENST00000532550 XYLT2Q9H1B5 865 aa18.41■□□□□ 0.54
PHRF1-204ENST00000532550 LTB4R2Q9NPC1 389 aa18.41■□□□□ 0.54
PHRF1-204ENST00000532550 CRTAC1Q9NQ79 661 aa18.41■□□□□ 0.54
PHRF1-204ENST00000532550 OBP2AQ9NY56 170 aa18.41■□□□□ 0.54
PHRF1-204ENST00000532550 DLGAP2Q9P1A6 1054 aa18.41■□□□□ 0.54
PHRF1-204ENST00000532550 SOBPA7XYQ1 873 aa18.4■□□□□ 0.54
PHRF1-204ENST00000532550 A8MXQ7 604 aa18.4■□□□□ 0.54
PHRF1-204ENST00000532550 MAPK13O15264 365 aa18.4■□□□□ 0.54
PHRF1-204ENST00000532550 LRRN2O75325 713 aa18.4■□□□□ 0.54
PHRF1-204ENST00000532550 PTPN1P18031 435 aaKnown RBP18.4■□□□□ 0.54
PHRF1-204ENST00000532550 BDNFP23560 247 aa18.4■□□□□ 0.54
PHRF1-204ENST00000532550 NR2F2P24468 414 aa18.4■□□□□ 0.54
PHRF1-204ENST00000532550 DDX6P26196 483 aaKnown RBP eCLIP18.4■□□□□ 0.54
PHRF1-204ENST00000532550 AVPR1AP37288 418 aa18.4■□□□□ 0.54
PHRF1-204ENST00000532550 DLG4P78352 724 aa18.4■□□□□ 0.54
PHRF1-204ENST00000532550 FCHO2Q0JRZ9 810 aa18.4■□□□□ 0.54
PHRF1-204ENST00000532550 ADAM9Q13443 819 aa18.4■□□□□ 0.54
PHRF1-204ENST00000532550 PNOCQ13519 176 aa18.4■□□□□ 0.54
PHRF1-204ENST00000532550 NFIL3Q16649 462 aa18.4■□□□□ 0.54
PHRF1-204ENST00000532550 SGSM1Q2NKQ1 1148 aa18.4■□□□□ 0.54
PHRF1-204ENST00000532550 ZNF699Q32M78 642 aa18.4■□□□□ 0.54
PHRF1-204ENST00000532550 CMTM8Q8IZV2 173 aa18.4■□□□□ 0.54
PHRF1-204ENST00000532550 CELF5Q8N6W0 485 aaKnown RBP18.4■□□□□ 0.54
PHRF1-204ENST00000532550 MAB21L3Q8N8X9 362 aa18.4■□□□□ 0.54
PHRF1-204ENST00000532550 STKLD1Q8NE28 680 aa18.4■□□□□ 0.54
PHRF1-204ENST00000532550 MYLPFQ96A32 169 aa18.4■□□□□ 0.54
PHRF1-204ENST00000532550 RSPRY1Q96DX4 576 aa18.4■□□□□ 0.54
PHRF1-204ENST00000532550 VRTNQ9H8Y1 702 aa18.4■□□□□ 0.54
PHRF1-204ENST00000532550 RMND1Q9NWS8 449 aa18.4■□□□□ 0.54
PHRF1-204ENST00000532550 THG1LQ9NWX6 298 aaKnown RBP18.4■□□□□ 0.54
PHRF1-204ENST00000532550 MTF2Q9Y483 593 aaPredicted RBP18.4■□□□□ 0.54
PHRF1-204ENST00000532550 MIA3Q5JRA6 1907 aa18.4■□□□□ 0.54
PHRF1-204ENST00000532550 ZNF638Q14966 1978 aaKnown RBP18.4■□□□□ 0.54
PHRF1-204ENST00000532550 CACNA1IQ9P0X4 2223 aa18.39■□□□□ 0.54
PHRF1-204ENST00000532550 NOL4O94818 638 aa18.39■□□□□ 0.53
PHRF1-204ENST00000532550 KRT13P13646 458 aa18.39■□□□□ 0.53
PHRF1-204ENST00000532550 P4HA1P13674 534 aa18.39■□□□□ 0.53
PHRF1-204ENST00000532550 GLULP15104 373 aa18.39■□□□□ 0.53
PHRF1-204ENST00000532550 ANXA13P27216 316 aa18.39■□□□□ 0.53
PHRF1-204ENST00000532550 PSMC2P35998 433 aaKnown RBP18.39■□□□□ 0.53
PHRF1-204ENST00000532550 VAMP7P51809 220 aa18.39■□□□□ 0.53
PHRF1-204ENST00000532550 ARHGAP29Q52LW3 1261 aa18.39■□□□□ 0.53
PHRF1-204ENST00000532550 MDH1BQ5I0G3 518 aa18.39■□□□□ 0.53
PHRF1-204ENST00000532550 TMEM150AQ86TG1 271 aa18.39■□□□□ 0.53
PHRF1-204ENST00000532550 C1orf210Q8IVY1 113 aa18.39■□□□□ 0.53
PHRF1-204ENST00000532550 BPIFB1Q8TDL5 484 aa18.39■□□□□ 0.53
PHRF1-204ENST00000532550 TRMT2BQ96GJ1 504 aaKnown RBP18.39■□□□□ 0.53
PHRF1-204ENST00000532550 PCED1BQ96HM7 432 aa18.39■□□□□ 0.53
PHRF1-204ENST00000532550 MYRFLQ96LU7 910 aa18.39■□□□□ 0.53
PHRF1-204ENST00000532550 HOOK1Q9UJC3 728 aaKnown RBP18.39■□□□□ 0.53
PHRF1-204ENST00000532550 SMC2O95347 1197 aa18.38■□□□□ 0.53
PHRF1-204ENST00000532550 VNN1O95497 513 aa18.38■□□□□ 0.53
PHRF1-204ENST00000532550 MAGEA9P43362 315 aa18.38■□□□□ 0.53
PHRF1-204ENST00000532550 CDH8P55286 799 aa18.38■□□□□ 0.53
PHRF1-204ENST00000532550 FAM160A1Q05DH4 1040 aa18.38■□□□□ 0.53
PHRF1-204ENST00000532550 ZACNQ401N2 412 aa18.38■□□□□ 0.53
PHRF1-204ENST00000532550 TXNDC8Q6A555 127 aa18.38■□□□□ 0.53
PHRF1-204ENST00000532550 INTS8Q75QN2 995 aaKnown RBP18.38■□□□□ 0.53
PHRF1-204ENST00000532550 SV2AQ7L0J3 742 aa18.38■□□□□ 0.53
PHRF1-204ENST00000532550 MON1AQ86VX9 555 aa18.38■□□□□ 0.53
PHRF1-204ENST00000532550 ENGASEQ8NFI3 743 aa18.38■□□□□ 0.53
PHRF1-204ENST00000532550 FAM3CQ92520 227 aa18.38■□□□□ 0.53
PHRF1-204ENST00000532550 TAF4BQ92750 862 aa18.38■□□□□ 0.53
PHRF1-204ENST00000532550 SPATA17Q96L03 361 aa18.38■□□□□ 0.53
PHRF1-204ENST00000532550 CEP295NLQ96MC4 621 aa18.38■□□□□ 0.53
PHRF1-204ENST00000532550 LRRC3BQ96PB8 259 aa18.38■□□□□ 0.53
PHRF1-204ENST00000532550 SMG9Q9H0W8 520 aaKnown RBP18.38■□□□□ 0.53
PHRF1-204ENST00000532550 PIAS3Q9Y6X2 628 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms