RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 PTPROQ16827 1216 aa13.32□□□□□ -0.28
COPB1-208ENST00000532088 TAS1R1Q7RTX1 841 aa13.32□□□□□ -0.28
COPB1-208ENST00000532088 PPFIBP1Q86W92 1011 aa13.32□□□□□ -0.28
COPB1-208ENST00000532088 OSTM1Q86WC4 334 aa13.32□□□□□ -0.28
COPB1-208ENST00000532088 CEP57Q86XR8 500 aa13.32□□□□□ -0.28
COPB1-208ENST00000532088 WHAMMQ8TF30 809 aa13.32□□□□□ -0.28
COPB1-208ENST00000532088 ARNTL2Q8WYA1 636 aa13.32□□□□□ -0.28
COPB1-208ENST00000532088 RIN2Q8WYP3 895 aaPredicted RBP13.32□□□□□ -0.28
COPB1-208ENST00000532088 ANP32BQ92688 251 aaKnown RBP13.32□□□□□ -0.28
COPB1-208ENST00000532088 KAT5Q92993 513 aa13.32□□□□□ -0.28
COPB1-208ENST00000532088 ELMO3Q96BJ8 720 aa13.32□□□□□ -0.28
COPB1-208ENST00000532088 TMEM176AQ96HP8 235 aa13.32□□□□□ -0.28
COPB1-208ENST00000532088 RTP3Q9BQQ7 232 aa13.32□□□□□ -0.28
COPB1-208ENST00000532088 EMILIN2Q9BXX0 1053 aa13.32□□□□□ -0.28
COPB1-208ENST00000532088 ZCWPW1Q9H0M4 648 aa13.32□□□□□ -0.28
COPB1-208ENST00000532088 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.32□□□□□ -0.28
COPB1-208ENST00000532088 AJAP1Q9UKB5 411 aaPredicted RBP13.32□□□□□ -0.28
COPB1-208ENST00000532088 PCDHB4Q9Y5E5 795 aa13.32□□□□□ -0.28
COPB1-208ENST00000532088 TIMM13Q9Y5L4 95 aaPredicted RBP13.32□□□□□ -0.28
COPB1-208ENST00000532088 FOXN3O00409 490 aaPredicted RBP13.31□□□□□ -0.28
COPB1-208ENST00000532088 CD58P19256 250 aa13.31□□□□□ -0.28
COPB1-208ENST00000532088 NDUFV1P49821 464 aa13.31□□□□□ -0.28
COPB1-208ENST00000532088 RAD23BP54727 409 aa13.31□□□□□ -0.28
COPB1-208ENST00000532088 TSPY1Q01534 308 aa13.31□□□□□ -0.28
COPB1-208ENST00000532088 CAMK1Q14012 370 aa13.31□□□□□ -0.28
COPB1-208ENST00000532088 STILQ15468 1287 aa13.31□□□□□ -0.28
COPB1-208ENST00000532088 ARHGAP44Q17R89 818 aa13.31□□□□□ -0.28
COPB1-208ENST00000532088 CTXN3Q4LDR2 81 aa13.31□□□□□ -0.28
COPB1-208ENST00000532088 INTS6LQ5JSJ4 861 aaKnown RBP13.31□□□□□ -0.28
COPB1-208ENST00000532088 FAM171BQ6P995 826 aa13.31□□□□□ -0.28
COPB1-208ENST00000532088 TMEM270Q6UE05 265 aa13.31□□□□□ -0.28
COPB1-208ENST00000532088 TMC7Q7Z402 723 aa13.31□□□□□ -0.28
COPB1-208ENST00000532088 TMC6Q7Z403 805 aa13.31□□□□□ -0.28
COPB1-208ENST00000532088 SPRED2Q7Z698 418 aa13.31□□□□□ -0.28
COPB1-208ENST00000532088 CNGA4Q8IV77 575 aa13.31□□□□□ -0.28
COPB1-208ENST00000532088 DCP1BQ8IZD4 617 aaKnown RBP13.31□□□□□ -0.28
COPB1-208ENST00000532088 MRPL43Q8N983 215 aaKnown RBP13.31□□□□□ -0.28
COPB1-208ENST00000532088 RBBP8NLQ8NC74 664 aaPredicted RBP13.31□□□□□ -0.28
COPB1-208ENST00000532088 C2orf15Q8WU43 125 aaKnown RBP13.31□□□□□ -0.28
COPB1-208ENST00000532088 PKMYT1Q99640 499 aa13.31□□□□□ -0.28
COPB1-208ENST00000532088 TCF25Q9BQ70 676 aa13.31□□□□□ -0.28
COPB1-208ENST00000532088 ALG13Q9NP73 1137 aaKnown RBP13.31□□□□□ -0.28
COPB1-208ENST00000532088 NLRC4Q9NPP4 1024 aa13.31□□□□□ -0.28
COPB1-208ENST00000532088 ENTPD7Q9NQZ7 604 aa13.31□□□□□ -0.28
COPB1-208ENST00000532088 AIPL1Q9NZN9 384 aa13.31□□□□□ -0.28
COPB1-208ENST00000532088 HSFX1Q9UBD0 423 aa13.31□□□□□ -0.28
COPB1-208ENST00000532088 MTUS1Q9ULD2 1270 aa13.31□□□□□ -0.28
COPB1-208ENST00000532088 LUC7L2Q9Y383 392 aaKnown RBP13.31□□□□□ -0.28
COPB1-208ENST00000532088 GOLGA6L6A8MZA4 724 aa13.3□□□□□ -0.28
COPB1-208ENST00000532088 LPXNO60711 386 aa13.3□□□□□ -0.28
COPB1-208ENST00000532088 CXCL14O95715 111 aa13.3□□□□□ -0.28
COPB1-208ENST00000532088 VDRP11473 427 aa13.3□□□□□ -0.28
COPB1-208ENST00000532088 FERP16591 822 aa13.3□□□□□ -0.28
COPB1-208ENST00000532088 POU3F3P20264 500 aaPredicted RBP13.3□□□□□ -0.28
COPB1-208ENST00000532088 DNAJB1P25685 340 aa13.3□□□□□ -0.28
COPB1-208ENST00000532088 LMO2P25791 158 aa13.3□□□□□ -0.28
COPB1-208ENST00000532088 HNRNPH3P31942 346 aaKnown RBP13.3□□□□□ -0.28
COPB1-208ENST00000532088 ERVFC1P60507 584 aa13.3□□□□□ -0.28
COPB1-208ENST00000532088 PTK2Q05397 1052 aa13.3□□□□□ -0.28
COPB1-208ENST00000532088 GPR17Q13304 367 aa13.3□□□□□ -0.28
COPB1-208ENST00000532088 RAB33AQ14088 237 aa13.3□□□□□ -0.28
COPB1-208ENST00000532088 NFE2Q16621 373 aaPredicted RBP13.3□□□□□ -0.28
COPB1-208ENST00000532088 TPGS2Q68CL5 300 aa13.3□□□□□ -0.28
COPB1-208ENST00000532088 ARHGAP17Q68EM7 881 aa13.3□□□□□ -0.28
COPB1-208ENST00000532088 RTL10Q7L3V2 364 aa13.3□□□□□ -0.28
COPB1-208ENST00000532088 ZNF677Q86XU0 584 aa13.3□□□□□ -0.28
COPB1-208ENST00000532088 DRC7Q8IY82 874 aa13.3□□□□□ -0.28
COPB1-208ENST00000532088 SLC4A11Q8NBS3 891 aa13.3□□□□□ -0.28
COPB1-208ENST00000532088 B3GALNT2Q8NCR0 500 aa13.3□□□□□ -0.28
COPB1-208ENST00000532088 OR10T2Q8NGX3 314 aa13.3□□□□□ -0.28
COPB1-208ENST00000532088 MYCBPAPQ8TBZ2 947 aa13.3□□□□□ -0.28
COPB1-208ENST00000532088 EPS8L1Q8TE68 723 aa13.3□□□□□ -0.28
COPB1-208ENST00000532088 MRPL38Q96DV4 380 aaKnown RBP13.3□□□□□ -0.28
COPB1-208ENST00000532088 FUBP3Q96I24 572 aaKnown RBP eCLIP13.3□□□□□ -0.28
COPB1-208ENST00000532088 SYT15Q9BQS2 421 aa13.3□□□□□ -0.28
COPB1-208ENST00000532088 CLSTN3Q9BQT9 956 aa13.3□□□□□ -0.28
COPB1-208ENST00000532088 ELOVL4Q9GZR5 314 aa13.3□□□□□ -0.28
COPB1-208ENST00000532088 NME7Q9Y5B8 376 aa13.3□□□□□ -0.28
COPB1-208ENST00000532088 RANBP2P49792 3224 aaKnown RBP13.3□□□□□ -0.28
COPB1-208ENST00000532088 COL4A4P53420 1690 aaPredicted RBP13.29□□□□□ -0.28
COPB1-208ENST00000532088 C2orf71A6NGG8 1288 aa13.29□□□□□ -0.28
COPB1-208ENST00000532088 LRRC53A6NM62 1247 aa13.29□□□□□ -0.28
COPB1-208ENST00000532088 AKR1B15C9JRZ8 316 aaPredicted RBP13.29□□□□□ -0.28
COPB1-208ENST00000532088 MFAP3LO75121 409 aa13.29□□□□□ -0.28
COPB1-208ENST00000532088 ADH1AP07327 375 aa13.29□□□□□ -0.28
COPB1-208ENST00000532088 KRT5P13647 590 aa13.29□□□□□ -0.28
COPB1-208ENST00000532088 PTPN1P18031 435 aaKnown RBP13.29□□□□□ -0.28
COPB1-208ENST00000532088 CASP14P31944 242 aa13.29□□□□□ -0.28
COPB1-208ENST00000532088 KRT9P35527 623 aa13.29□□□□□ -0.28
COPB1-208ENST00000532088 PRKCIP41743 596 aa13.29□□□□□ -0.28
COPB1-208ENST00000532088 FXR1P51114 621 aaKnown RBP eCLIP13.29□□□□□ -0.28
COPB1-208ENST00000532088 PTPN21Q16825 1174 aa13.29□□□□□ -0.28
COPB1-208ENST00000532088 ZNF697Q5TEC3 545 aa13.29□□□□□ -0.28
COPB1-208ENST00000532088 SFMBT2Q5VUG0 894 aa13.29□□□□□ -0.28
COPB1-208ENST00000532088 C4orf50Q6ZRC1 276 aa13.29□□□□□ -0.28
COPB1-208ENST00000532088 PPP2R3CQ969Q6 453 aa13.29□□□□□ -0.28
COPB1-208ENST00000532088 B3GALT6Q96L58 329 aa13.29□□□□□ -0.28
COPB1-208ENST00000532088 KLHL5Q96PQ7 755 aa13.29□□□□□ -0.28
COPB1-208ENST00000532088 TWNKQ96RR1 684 aa13.29□□□□□ -0.28
COPB1-208ENST00000532088 DNAJC7Q99615 494 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms