RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 CUL5Q93034 780 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 TSPAN17Q96FV3 270 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 CCDC120Q96HB5 630 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 WDR92Q96MX6 357 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 C1orf43Q9BWL3 253 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 CPEB1Q9BZB8 566 aaKnown RBP4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 ACAD9Q9H845 621 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 SPON1Q9HCB6 807 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 ATP13A1Q9HD20 1204 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 PPP1R14DQ9NXH3 145 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 TAS2R10Q9NYW0 307 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 TMOD4Q9NZQ9 345 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 LPAR3Q9UBY5 353 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 ODF2LQ9ULJ1 636 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 ISY1Q9ULR0 285 aaKnown RBP4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 USP15Q9Y4E8 981 aaPredicted RBP4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 LMTK3Q96Q04 1460 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 SOS1Q07889 1333 aaPredicted RBP4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 hCG_1807616A0A1W2PRN6 198 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 FAM170BA6NMN3 283 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 E7EVH7 732 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 AP3D1O14617 1153 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 SPTLC2O15270 562 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 GRM6O15303 877 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 HTATSF1O43719 755 aaKnown RBP4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 HSPA4LO95757 839 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 QDPRP09417 244 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 ZGLP1P0C6A0 271 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 MSL3P1P0C860 447 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 CKBP12277 381 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 PRKCAP17252 672 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 ABCD3P28288 659 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 NNMTP40261 264 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 PSMB10P40306 273 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 ARL4AP40617 200 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 MSH2P43246 934 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 CD97P48960 835 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 CPT1AP50416 773 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 RARSP54136 660 aaKnown RBP4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 CAMK1Q14012 370 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 ARHGEF7Q14155 803 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 SEC23BQ15437 767 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 ODF2Q5BJF6 829 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 DCAF12L1Q5VU92 463 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 GPR139Q6DWJ6 353 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 GRAMD4Q6IC98 578 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 KLHL24Q6TFL4 600 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 TEPPQ6URK8 271 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 CRTC1Q6UUV9 634 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 GALNTL5Q7Z4T8 443 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 SLC51AQ86UW1 340 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 RASGRP3Q8IV61 690 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 ZGPATQ8N5A5 531 aaKnown RBP4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 TEX9Q8N6V9 391 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 NFKBIDQ8NI38 313 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 ZCCHC10Q8TBK6 192 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 SLC22A17Q8WUG5 538 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 TBC1D5Q92609 795 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 RAB24Q969Q5 203 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 MOGAT1Q96PD6 335 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 YME1L1Q96TA2 773 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 FUZQ9BT04 418 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 ZCWPW1Q9H0M4 648 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 C11orf54Q9H0W9 315 aaPredicted RBP4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 OR10A4Q9H209 315 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 SLC39A2Q9NP94 309 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 MRGBPQ9NV56 204 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 ZSCAN32Q9NX65 697 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 GPRC5DQ9NZD1 345 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 ADD3Q9UEY8 706 aaKnown RBP4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 CLCA2Q9UQC9 943 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 VWA7Q9Y334 891 aa4.79□□□□□ -1.64
AC055878.1-201ENST00000531858 IRS2Q9Y4H2 1338 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 VWA3AA6NCI4 1184 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 TRIM64A6NGJ6 449 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 TRIM64BA6NI03 449 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 PCDH17O14917 1159 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 DNPH1O43598 174 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 USP2O75604 605 aaPredicted RBP4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 CHEK2O96017 543 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 F9P00740 461 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 KRT1P04264 644 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 ANXA6P08133 673 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 GYS1P13807 737 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 GYPEP15421 78 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 TPH1P17752 444 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 MST1P26927 711 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 ATP5DP30049 168 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 ABCD1P33897 745 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 PGM1P36871 562 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 PAFAH1B1P43034 410 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 NOMO3P69849 1222 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 JAG1P78504 1218 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 IFI35P80217 286 aaPredicted RBP4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 MC1RQ01726 317 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 MPP3Q13368 585 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 ATP1A4Q13733 1029 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 NR1I3Q14994 352 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 DUSP28Q4G0W2 176 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 RAP1GAP2Q684P5 730 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms