RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 UBE4BO95155 1302 aa18.04■□□□□ 0.48
CPSF1-207ENST00000531727 HCRTO43612 131 aa18.04■□□□□ 0.48
CPSF1-207ENST00000531727 ZSCAN22P10073 491 aaPredicted RBP18.04■□□□□ 0.48
CPSF1-207ENST00000531727 PDIA4P13667 645 aaKnown RBP18.04■□□□□ 0.48
CPSF1-207ENST00000531727 PON2Q15165 354 aa18.04■□□□□ 0.48
CPSF1-207ENST00000531727 CCDC142Q17RM4 750 aa18.04■□□□□ 0.48
CPSF1-207ENST00000531727 ITPRIPL2Q3MIP1 535 aa18.04■□□□□ 0.48
CPSF1-207ENST00000531727 TXNDC8Q6A555 127 aa18.04■□□□□ 0.48
CPSF1-207ENST00000531727 UNC13DQ70J99 1090 aa18.04■□□□□ 0.48
CPSF1-207ENST00000531727 MON1AQ86VX9 555 aa18.04■□□□□ 0.48
CPSF1-207ENST00000531727 SPATA2LQ8IUW3 424 aaPredicted RBP18.04■□□□□ 0.48
CPSF1-207ENST00000531727 WDR49Q8IV35 697 aa18.04■□□□□ 0.48
CPSF1-207ENST00000531727 KBTBD7Q8WVZ9 684 aa18.04■□□□□ 0.48
CPSF1-207ENST00000531727 USP13Q92995 863 aaPredicted RBP18.04■□□□□ 0.48
CPSF1-207ENST00000531727 SECISBP2LQ93073 1101 aaKnown RBP18.04■□□□□ 0.48
CPSF1-207ENST00000531727 RMDN1Q96DB5 314 aa18.04■□□□□ 0.48
CPSF1-207ENST00000531727 FUBP3Q96I24 572 aaKnown RBP eCLIP18.04■□□□□ 0.48
CPSF1-207ENST00000531727 KIF9Q9HAQ2 790 aa18.04■□□□□ 0.48
CPSF1-207ENST00000531727 AGPAT3Q9NRZ7 376 aa18.04■□□□□ 0.48
CPSF1-207ENST00000531727 GKN1Q9NS71 199 aa18.04■□□□□ 0.48
CPSF1-207ENST00000531727 TDP1Q9NUW8 608 aa18.04■□□□□ 0.48
CPSF1-207ENST00000531727 CCL26Q9Y258 94 aa18.04■□□□□ 0.48
CPSF1-207ENST00000531727 ZNF638Q14966 1978 aaKnown RBP18.03■□□□□ 0.48
CPSF1-207ENST00000531727 POLR2DO15514 142 aaKnown RBP18.03■□□□□ 0.48
CPSF1-207ENST00000531727 TGFB1I1O43294 461 aa18.03■□□□□ 0.48
CPSF1-207ENST00000531727 TADA3O75528 432 aa18.03■□□□□ 0.48
CPSF1-207ENST00000531727 PAPSS2O95340 614 aaPredicted RBP18.03■□□□□ 0.48
CPSF1-207ENST00000531727 CCINQ13939 588 aa18.03■□□□□ 0.48
CPSF1-207ENST00000531727 SNRNP35Q16560 246 aaKnown RBP18.03■□□□□ 0.48
CPSF1-207ENST00000531727 FAM171BQ6P995 826 aa18.03■□□□□ 0.48
CPSF1-207ENST00000531727 Q6ZS52 159 aa18.03■□□□□ 0.48
CPSF1-207ENST00000531727 HSCBQ8IWL3 235 aa18.03■□□□□ 0.48
CPSF1-207ENST00000531727 MYRFLQ96LU7 910 aa18.03■□□□□ 0.48
CPSF1-207ENST00000531727 FAM83CQ9BQN1 747 aa18.03■□□□□ 0.48
CPSF1-207ENST00000531727 OTOGLQ3ZCN5 2332 aa18.03■□□□□ 0.48
CPSF1-207ENST00000531727 ATP2C2O75185 946 aa18.02■□□□□ 0.48
CPSF1-207ENST00000531727 F13A1P00488 732 aa18.02■□□□□ 0.48
CPSF1-207ENST00000531727 HSP90AA1P07900 732 aaKnown RBP18.02■□□□□ 0.48
CPSF1-207ENST00000531727 MAGEA11P43364 429 aa18.02■□□□□ 0.48
CPSF1-207ENST00000531727 SNRPFP62306 86 aaKnown RBP18.02■□□□□ 0.48
CPSF1-207ENST00000531727 EHHADHQ08426 723 aa18.02■□□□□ 0.48
CPSF1-207ENST00000531727 RUNX3Q13761 415 aa18.02■□□□□ 0.48
CPSF1-207ENST00000531727 ZNF268Q14587 947 aaPredicted RBP18.02■□□□□ 0.48
CPSF1-207ENST00000531727 FOXD4L6Q3SYB3 417 aaPredicted RBP18.02■□□□□ 0.48
CPSF1-207ENST00000531727 FOXD4L3Q6VB84 417 aaPredicted RBP18.02■□□□□ 0.48
CPSF1-207ENST00000531727 C4orf50Q6ZRC1 276 aa18.02■□□□□ 0.48
CPSF1-207ENST00000531727 TRAPPC11Q7Z392 1133 aa18.02■□□□□ 0.48
CPSF1-207ENST00000531727 SCN4BQ8IWT1 228 aa18.02■□□□□ 0.48
CPSF1-207ENST00000531727 SYNPOQ8N3V7 929 aa18.02■□□□□ 0.48
CPSF1-207ENST00000531727 GPR161Q8N6U8 529 aaKnown RBP18.02■□□□□ 0.48
CPSF1-207ENST00000531727 RDH13Q8NBN7 331 aa18.02■□□□□ 0.48
CPSF1-207ENST00000531727 RIN3Q8TB24 985 aa18.02■□□□□ 0.48
CPSF1-207ENST00000531727 SCFD1Q8WVM8 642 aa18.02■□□□□ 0.48
CPSF1-207ENST00000531727 SYT15Q9BQS2 421 aa18.02■□□□□ 0.48
CPSF1-207ENST00000531727 HPS4Q9NQG7 708 aa18.02■□□□□ 0.48
CPSF1-207ENST00000531727 CDH9Q9ULB4 789 aa18.02■□□□□ 0.48
CPSF1-207ENST00000531727 WARSP23381 471 aaKnown RBP18.01■□□□□ 0.47
CPSF1-207ENST00000531727 LMO2P25791 158 aa18.01■□□□□ 0.47
CPSF1-207ENST00000531727 CASP1P29466 404 aa18.01■□□□□ 0.47
CPSF1-207ENST00000531727 ME1P48163 572 aa18.01■□□□□ 0.47
CPSF1-207ENST00000531727 CYP2J2P51589 502 aa18.01■□□□□ 0.47
CPSF1-207ENST00000531727 PSMC1P62191 440 aaKnown RBP18.01■□□□□ 0.47
CPSF1-207ENST00000531727 CYP24A1Q07973 514 aa18.01■□□□□ 0.47
CPSF1-207ENST00000531727 PSMD6Q15008 389 aa18.01■□□□□ 0.47
CPSF1-207ENST00000531727 NELFCDQ8IXH7 590 aa18.01■□□□□ 0.47
CPSF1-207ENST00000531727 XXYLT1Q8NBI6 393 aa18.01■□□□□ 0.47
CPSF1-207ENST00000531727 FNBP1Q96RU3 617 aa18.01■□□□□ 0.47
CPSF1-207ENST00000531727 CGRRF1Q99675 332 aa18.01■□□□□ 0.47
CPSF1-207ENST00000531727 BLZF1Q9H2G9 400 aa18.01■□□□□ 0.47
CPSF1-207ENST00000531727 FAM13BQ9NYF5 915 aa18.01■□□□□ 0.47
CPSF1-207ENST00000531727 MAGEC2Q9UBF1 373 aaPredicted RBP18.01■□□□□ 0.47
CPSF1-207ENST00000531727 RAB23Q9ULC3 237 aa18.01■□□□□ 0.47
CPSF1-207ENST00000531727 PCDHA7Q9UN72 937 aa18.01■□□□□ 0.47
CPSF1-207ENST00000531727 GREB1Q4ZG55 1949 aa18.01■□□□□ 0.47
CPSF1-207ENST00000531727 EP300Q09472 2414 aaPredicted RBP18.01■□□□□ 0.47
CPSF1-207ENST00000531727 K7ESF4 209 aa18■□□□□ 0.47
CPSF1-207ENST00000531727 CLIC2O15247 247 aa18■□□□□ 0.47
CPSF1-207ENST00000531727 DLATP10515 647 aaKnown RBP18■□□□□ 0.47
CPSF1-207ENST00000531727 TNNI1P19237 187 aa18■□□□□ 0.47
CPSF1-207ENST00000531727 PUM1Q14671 1186 aaKnown RBP eCLIP18■□□□□ 0.47
CPSF1-207ENST00000531727 MAPRE1Q15691 268 aaKnown RBP18■□□□□ 0.47
CPSF1-207ENST00000531727 BMT2Q1RMZ1 405 aa18■□□□□ 0.47
CPSF1-207ENST00000531727 TMEM196Q5HYL7 178 aa18■□□□□ 0.47
CPSF1-207ENST00000531727 RESP18Q5W5W9 173 aa18■□□□□ 0.47
CPSF1-207ENST00000531727 TRIM68Q6AZZ1 485 aa18■□□□□ 0.47
CPSF1-207ENST00000531727 ATL3Q6DD88 541 aa18■□□□□ 0.47
CPSF1-207ENST00000531727 CC2D1AQ6P1N0 951 aaPredicted RBP18■□□□□ 0.47
CPSF1-207ENST00000531727 HS2ST1Q7LGA3 356 aa18■□□□□ 0.47
CPSF1-207ENST00000531727 MYLPFQ96A32 169 aa18■□□□□ 0.47
CPSF1-207ENST00000531727 SPATA17Q96L03 361 aa18■□□□□ 0.47
CPSF1-207ENST00000531727 MMS19Q96T76 1030 aa18■□□□□ 0.47
CPSF1-207ENST00000531727 EBF3Q9H4W6 596 aa18■□□□□ 0.47
CPSF1-207ENST00000531727 TRPC7Q9HCX4 862 aa18■□□□□ 0.47
CPSF1-207ENST00000531727 CRTAC1Q9NQ79 661 aa18■□□□□ 0.47
CPSF1-207ENST00000531727 CGNQ9P2M7 1197 aaKnown RBP18■□□□□ 0.47
CPSF1-207ENST00000531727 GMEB2Q9UKD1 530 aa18■□□□□ 0.47
CPSF1-207ENST00000531727 PTPRDP23468 1912 aa18■□□□□ 0.47
CPSF1-207ENST00000531727 ANAPC1Q9H1A4 1944 aa18■□□□□ 0.47
CPSF1-207ENST00000531727 TRAV19A0A0A6YYK7 116 aa17.99■□□□□ 0.47
CPSF1-207ENST00000531727 PVALEFA0A1B0GWK0 134 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms