RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 PUM3Q15397 648 aaKnown RBP5.25□□□□□ -1.57
USP47-211ENST00000531513 SPDYE7PQ495Y7 208 aa5.25□□□□□ -1.57
USP47-211ENST00000531513 DACT2Q5SW24 774 aa5.25□□□□□ -1.57
USP47-211ENST00000531513 TSHZ3Q63HK5 1081 aa5.25□□□□□ -1.57
USP47-211ENST00000531513 PCGF5Q86SE9 256 aa5.25□□□□□ -1.57
USP47-211ENST00000531513 SESTD1Q86VW0 696 aa5.25□□□□□ -1.57
USP47-211ENST00000531513 ARHGEF25Q86VW2 580 aa5.25□□□□□ -1.57
USP47-211ENST00000531513 LIX1LQ8IVB5 337 aa5.25□□□□□ -1.57
USP47-211ENST00000531513 CCDC33Q8N5R6 958 aa5.25□□□□□ -1.57
USP47-211ENST00000531513 IFI44Q8TCB0 444 aa5.25□□□□□ -1.57
USP47-211ENST00000531513 RAB24Q969Q5 203 aa5.25□□□□□ -1.57
USP47-211ENST00000531513 RNF31Q96EP0 1072 aa5.25□□□□□ -1.57
USP47-211ENST00000531513 SUCLG2Q96I99 432 aa5.25□□□□□ -1.57
USP47-211ENST00000531513 MSLNLQ96KJ4 702 aa5.25□□□□□ -1.57
USP47-211ENST00000531513 TTLL2Q9BWV7 592 aa5.25□□□□□ -1.57
USP47-211ENST00000531513 SARS2Q9NP81 518 aaKnown RBP5.25□□□□□ -1.57
USP47-211ENST00000531513 CNNM1Q9NRU3 951 aa5.25□□□□□ -1.57
USP47-211ENST00000531513 SEMA4GQ9NTN9 838 aa5.25□□□□□ -1.57
USP47-211ENST00000531513 MAP3K20Q9NYL2 800 aaKnown RBP5.25□□□□□ -1.57
USP47-211ENST00000531513 CPNE7Q9UBL6 633 aa5.25□□□□□ -1.57
USP47-211ENST00000531513 FBXO9Q9UK97 447 aaPredicted RBP5.25□□□□□ -1.57
USP47-211ENST00000531513 GPR52Q9Y2T5 361 aa5.25□□□□□ -1.57
USP47-211ENST00000531513 NOX1Q9Y5S8 564 aa5.25□□□□□ -1.57
USP47-211ENST00000531513 PRRT4C9JH25 899 aa5.24□□□□□ -1.57
USP47-211ENST00000531513 F8W8V4 182 aa5.24□□□□□ -1.57
USP47-211ENST00000531513 APOL1O14791 398 aa5.24□□□□□ -1.57
USP47-211ENST00000531513 CSTBP04080 98 aaKnown RBP5.24□□□□□ -1.57
USP47-211ENST00000531513 SNRPA1P09661 255 aaKnown RBP5.24□□□□□ -1.57
USP47-211ENST00000531513 PARP1P09874 1014 aaKnown RBP5.24□□□□□ -1.57
USP47-211ENST00000531513 SRGNP10124 158 aa5.24□□□□□ -1.57
USP47-211ENST00000531513 BRAFP15056 766 aa5.24□□□□□ -1.57
USP47-211ENST00000531513 NPR1P16066 1061 aa5.24□□□□□ -1.57
USP47-211ENST00000531513 GUCY1A2P33402 732 aa5.24□□□□□ -1.57
USP47-211ENST00000531513 PTPN7P35236 360 aa5.24□□□□□ -1.57
USP47-211ENST00000531513 HSPA7P48741 367 aa5.24□□□□□ -1.57
USP47-211ENST00000531513 TLE1Q04724 770 aa5.24□□□□□ -1.57
USP47-211ENST00000531513 FOXD4Q12950 439 aaPredicted RBP5.24□□□□□ -1.57
USP47-211ENST00000531513 PPFIA1Q13136 1202 aa5.24□□□□□ -1.57
USP47-211ENST00000531513 SP140Q13342 867 aa5.24□□□□□ -1.57
USP47-211ENST00000531513 PMS2P11Q13670 270 aa5.24□□□□□ -1.57
USP47-211ENST00000531513 GADL1Q6ZQY3 521 aa5.24□□□□□ -1.57
USP47-211ENST00000531513 MED25Q71SY5 747 aa5.24□□□□□ -1.57
USP47-211ENST00000531513 SRRM1Q8IYB3 904 aaKnown RBP5.24□□□□□ -1.57
USP47-211ENST00000531513 CLASRPQ8N2M8 674 aaKnown RBP5.24□□□□□ -1.57
USP47-211ENST00000531513 ZNF527Q8NB42 609 aa5.24□□□□□ -1.57
USP47-211ENST00000531513 FBXO18Q8NFZ0 1043 aa5.24□□□□□ -1.57
USP47-211ENST00000531513 ZNF384Q8TF68 577 aa5.24□□□□□ -1.57
USP47-211ENST00000531513 FUBP1Q96AE4 644 aaKnown RBP5.24□□□□□ -1.57
USP47-211ENST00000531513 TMX3Q96JJ7 454 aa5.24□□□□□ -1.57
USP47-211ENST00000531513 MRGPRX1Q96LB2 322 aa5.24□□□□□ -1.57
USP47-211ENST00000531513 TBATAQ96M53 351 aa5.24□□□□□ -1.57
USP47-211ENST00000531513 WDCPQ9H6R7 721 aa5.24□□□□□ -1.57
USP47-211ENST00000531513 AS3MTQ9HBK9 375 aa5.24□□□□□ -1.57
USP47-211ENST00000531513 FOXJ2Q9P0K8 574 aa5.24□□□□□ -1.57
USP47-211ENST00000531513 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.24□□□□□ -1.57
USP47-211ENST00000531513 PCDHA1Q9Y5I3 950 aa5.24□□□□□ -1.57
USP47-211ENST00000531513 A0A1B0GTW7 788 aa5.23□□□□□ -1.57
USP47-211ENST00000531513 A0A1W2PPC4 97 aa5.23□□□□□ -1.57
USP47-211ENST00000531513 LRRC3CA6NJW4 275 aa5.23□□□□□ -1.57
USP47-211ENST00000531513 FFAR2O15552 330 aa5.23□□□□□ -1.57
USP47-211ENST00000531513 PLA2G6O60733 806 aa5.23□□□□□ -1.57
USP47-211ENST00000531513 FTH1P19P0C7X4 201 aa5.23□□□□□ -1.57
USP47-211ENST00000531513 HARSP12081 509 aaKnown RBP5.23□□□□□ -1.57
USP47-211ENST00000531513 ITGB6P18564 788 aa5.23□□□□□ -1.57
USP47-211ENST00000531513 EN2P19622 333 aaPredicted RBP5.23□□□□□ -1.57
USP47-211ENST00000531513 BDNFP23560 247 aa5.23□□□□□ -1.57
USP47-211ENST00000531513 RARRES1P49788 294 aa5.23□□□□□ -1.57
USP47-211ENST00000531513 PER3P56645 1201 aa5.23□□□□□ -1.57
USP47-211ENST00000531513 CXADRP78310 365 aa5.23□□□□□ -1.57
USP47-211ENST00000531513 STARD3Q14849 445 aa5.23□□□□□ -1.57
USP47-211ENST00000531513 MPEG1Q2M385 716 aa5.23□□□□□ -1.57
USP47-211ENST00000531513 SLC4A8Q2Y0W8 1093 aa5.23□□□□□ -1.57
USP47-211ENST00000531513 ARL13BQ3SXY8 428 aa5.23□□□□□ -1.57
USP47-211ENST00000531513 FLYWCH1Q4VC44 716 aa5.23□□□□□ -1.57
USP47-211ENST00000531513 KHDC1LQ5JSQ8 128 aa5.23□□□□□ -1.57
USP47-211ENST00000531513 KLHDC7AQ5VTJ3 777 aa5.23□□□□□ -1.57
USP47-211ENST00000531513 PQLC1Q8N2U9 271 aa5.23□□□□□ -1.57
USP47-211ENST00000531513 ATP11CQ8NB49 1132 aa5.23□□□□□ -1.57
USP47-211ENST00000531513 CCHCR1Q8TD31 782 aa5.23□□□□□ -1.57
USP47-211ENST00000531513 TBC1D20Q96BZ9 403 aa5.23□□□□□ -1.57
USP47-211ENST00000531513 GCC1Q96CN9 775 aa5.23□□□□□ -1.57
USP47-211ENST00000531513 ZHX3Q9H4I2 956 aa5.23□□□□□ -1.57
USP47-211ENST00000531513 PIH1D1Q9NWS0 290 aaKnown RBP5.23□□□□□ -1.57
USP47-211ENST00000531513 FAM30AQ9NZY2 134 aa5.23□□□□□ -1.57
USP47-211ENST00000531513 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.23□□□□□ -1.57
USP47-211ENST00000531513 SWAP70Q9UH65 585 aa5.23□□□□□ -1.57
USP47-211ENST00000531513 FEZ2Q9UHY8 353 aaPredicted RBP5.23□□□□□ -1.57
USP47-211ENST00000531513 PCDHA6Q9UN73 950 aa5.23□□□□□ -1.57
USP47-211ENST00000531513 MAGED2Q9UNF1 606 aaPredicted RBP5.23□□□□□ -1.57
USP47-211ENST00000531513 CEP83Q9Y592 693 aa5.23□□□□□ -1.57
USP47-211ENST00000531513 MYBBP1AQ9BQG0 1328 aaKnown RBP5.23□□□□□ -1.57
USP47-211ENST00000531513 CCDC78A2IDD5 438 aa5.22□□□□□ -1.57
USP47-211ENST00000531513 NT5C1B-RDH14C9J2C7 533 aa5.22□□□□□ -1.57
USP47-211ENST00000531513 AMY1AP04745 511 aa5.22□□□□□ -1.57
USP47-211ENST00000531513 FGFR4P22455 802 aa5.22□□□□□ -1.57
USP47-211ENST00000531513 MAN1A1P33908 653 aa5.22□□□□□ -1.57
USP47-211ENST00000531513 CACNA2D1P54289 1103 aa5.22□□□□□ -1.57
USP47-211ENST00000531513 MRPS35P82673 323 aaKnown RBP5.22□□□□□ -1.57
USP47-211ENST00000531513 AFMIDQ63HM1 303 aa5.22□□□□□ -1.57
USP47-211ENST00000531513 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms