RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 C4orf50Q6ZRC1 276 aa23.87■■□□□ 1.41
TRAPPC4-210ENST00000531290 TRAPPC11Q7Z392 1133 aa23.87■■□□□ 1.41
TRAPPC4-210ENST00000531290 MON1AQ86VX9 555 aa23.87■■□□□ 1.41
TRAPPC4-210ENST00000531290 SCN4BQ8IWT1 228 aa23.87■■□□□ 1.41
TRAPPC4-210ENST00000531290 SPEM1Q8N4L4 309 aa23.87■■□□□ 1.41
TRAPPC4-210ENST00000531290 XXYLT1Q8NBI6 393 aa23.87■■□□□ 1.41
TRAPPC4-210ENST00000531290 STKLD1Q8NE28 680 aa23.87■■□□□ 1.41
TRAPPC4-210ENST00000531290 SCFD1Q8WVM8 642 aa23.87■■□□□ 1.41
TRAPPC4-210ENST00000531290 FUBP3Q96I24 572 aaKnown RBP eCLIP23.87■■□□□ 1.41
TRAPPC4-210ENST00000531290 MMS19Q96T76 1030 aa23.87■■□□□ 1.41
TRAPPC4-210ENST00000531290 TDP1Q9NUW8 608 aa23.87■■□□□ 1.41
TRAPPC4-210ENST00000531290 CDH9Q9ULB4 789 aa23.87■■□□□ 1.41
TRAPPC4-210ENST00000531290 PVALEFA0A1B0GWK0 134 aa23.86■■□□□ 1.41
TRAPPC4-210ENST00000531290 HCRTO43612 131 aa23.86■■□□□ 1.41
TRAPPC4-210ENST00000531290 NOL4O94818 638 aa23.86■■□□□ 1.41
TRAPPC4-210ENST00000531290 CASP1P29466 404 aa23.86■■□□□ 1.41
TRAPPC4-210ENST00000531290 AFMP43652 599 aa23.86■■□□□ 1.41
TRAPPC4-210ENST00000531290 RESP18Q5W5W9 173 aa23.86■■□□□ 1.41
TRAPPC4-210ENST00000531290 CC2D1AQ6P1N0 951 aaPredicted RBP23.86■■□□□ 1.41
TRAPPC4-210ENST00000531290 FAM171BQ6P995 826 aa23.86■■□□□ 1.41
TRAPPC4-210ENST00000531290 TXNDC11Q6PKC3 985 aa23.86■■□□□ 1.41
TRAPPC4-210ENST00000531290 CEP57L1Q8IYX8 460 aa23.86■■□□□ 1.41
TRAPPC4-210ENST00000531290 USP13Q92995 863 aaPredicted RBP23.86■■□□□ 1.41
TRAPPC4-210ENST00000531290 CCDC127Q96BQ5 260 aa23.86■■□□□ 1.41
TRAPPC4-210ENST00000531290 SYT15Q9BQS2 421 aa23.86■■□□□ 1.41
TRAPPC4-210ENST00000531290 EPC1Q9H2F5 836 aa23.86■■□□□ 1.41
TRAPPC4-210ENST00000531290 KIF9Q9HAQ2 790 aa23.86■■□□□ 1.41
TRAPPC4-210ENST00000531290 RBM12Q9NTZ6 932 aaKnown RBP23.86■■□□□ 1.41
TRAPPC4-210ENST00000531290 MAGEC2Q9UBF1 373 aaPredicted RBP23.86■■□□□ 1.41
TRAPPC4-210ENST00000531290 LMO2P25791 158 aa23.85■■□□□ 1.41
TRAPPC4-210ENST00000531290 SATB1Q01826 763 aa23.85■■□□□ 1.41
TRAPPC4-210ENST00000531290 PSMD6Q15008 389 aa23.85■■□□□ 1.41
TRAPPC4-210ENST00000531290 PON2Q15165 354 aa23.85■■□□□ 1.41
TRAPPC4-210ENST00000531290 MAPRE1Q15691 268 aaKnown RBP23.85■■□□□ 1.41
TRAPPC4-210ENST00000531290 LIMS2Q7Z4I7 341 aa23.85■■□□□ 1.41
TRAPPC4-210ENST00000531290 SPRYD3Q8NCJ5 442 aa23.85■■□□□ 1.41
TRAPPC4-210ENST00000531290 TRMT2BQ96GJ1 504 aaKnown RBP23.85■■□□□ 1.41
TRAPPC4-210ENST00000531290 MYRFLQ96LU7 910 aa23.85■■□□□ 1.41
TRAPPC4-210ENST00000531290 SLC39A2Q9NP94 309 aa23.85■■□□□ 1.41
TRAPPC4-210ENST00000531290 CGNQ9P2M7 1197 aaKnown RBP23.85■■□□□ 1.41
TRAPPC4-210ENST00000531290 SMG5Q9UPR3 1016 aaKnown RBP23.85■■□□□ 1.41
TRAPPC4-210ENST00000531290 CCL26Q9Y258 94 aa23.85■■□□□ 1.41
TRAPPC4-210ENST00000531290 CACNA1IQ9P0X4 2223 aa23.85■■□□□ 1.41
TRAPPC4-210ENST00000531290 GVINP1Q7Z2Y8 2422 aa23.85■■□□□ 1.41
TRAPPC4-210ENST00000531290 SCN1AP35498 2009 aa23.84■■□□□ 1.41
TRAPPC4-210ENST00000531290 ATP2C2O75185 946 aa23.84■■□□□ 1.41
TRAPPC4-210ENST00000531290 PDGFRBP09619 1106 aa23.84■■□□□ 1.41
TRAPPC4-210ENST00000531290 TDGF1P13385 188 aa23.84■■□□□ 1.41
TRAPPC4-210ENST00000531290 MAGEA11P43364 429 aa23.84■■□□□ 1.41
TRAPPC4-210ENST00000531290 CYP24A1Q07973 514 aa23.84■■□□□ 1.41
TRAPPC4-210ENST00000531290 EHHADHQ08426 723 aa23.84■■□□□ 1.41
TRAPPC4-210ENST00000531290 CUL4BQ13620 913 aa23.84■■□□□ 1.41
TRAPPC4-210ENST00000531290 GAS6Q14393 721 aa23.84■■□□□ 1.41
TRAPPC4-210ENST00000531290 CCDC142Q17RM4 750 aa23.84■■□□□ 1.41
TRAPPC4-210ENST00000531290 FSIP1Q8NA03 581 aa23.84■■□□□ 1.41
TRAPPC4-210ENST00000531290 KBTBD7Q8WVZ9 684 aa23.84■■□□□ 1.41
TRAPPC4-210ENST00000531290 FAM83CQ9BQN1 747 aa23.84■■□□□ 1.41
TRAPPC4-210ENST00000531290 SNX25Q9H3E2 840 aa23.84■■□□□ 1.41
TRAPPC4-210ENST00000531290 TRPC7Q9HCX4 862 aa23.84■■□□□ 1.41
TRAPPC4-210ENST00000531290 RCOR1Q9UKL0 485 aa23.84■■□□□ 1.41
TRAPPC4-210ENST00000531290 EP300Q09472 2414 aaPredicted RBP23.83■■□□□ 1.41
TRAPPC4-210ENST00000531290 CST3P01034 146 aaPredicted RBP23.83■■□□□ 1.41
TRAPPC4-210ENST00000531290 WARSP23381 471 aaKnown RBP23.83■■□□□ 1.41
TRAPPC4-210ENST00000531290 PSMC1P62191 440 aaKnown RBP23.83■■□□□ 1.41
TRAPPC4-210ENST00000531290 AMPD2Q01433 879 aa23.83■■□□□ 1.41
TRAPPC4-210ENST00000531290 DNM1Q05193 864 aaKnown RBP23.83■■□□□ 1.41
TRAPPC4-210ENST00000531290 RUNX3Q13761 415 aa23.83■■□□□ 1.41
TRAPPC4-210ENST00000531290 KNOP1Q1ED39 458 aaKnown RBP23.83■■□□□ 1.41
TRAPPC4-210ENST00000531290 VSTM1Q6UX27 236 aa23.83■■□□□ 1.41
TRAPPC4-210ENST00000531290 SYNPOQ8N3V7 929 aa23.83■■□□□ 1.41
TRAPPC4-210ENST00000531290 CGRRF1Q99675 332 aa23.83■■□□□ 1.41
TRAPPC4-210ENST00000531290 RAB23Q9ULC3 237 aa23.83■■□□□ 1.41
TRAPPC4-210ENST00000531290 F5P12259 2224 aa23.83■■□□□ 1.4
TRAPPC4-210ENST00000531290 GNL1P36915 607 aaPredicted RBP23.82■■□□□ 1.4
TRAPPC4-210ENST00000531290 GRIK1P39086 918 aa23.82■■□□□ 1.4
TRAPPC4-210ENST00000531290 TNNC1P63316 161 aa23.82■■□□□ 1.4
TRAPPC4-210ENST00000531290 CYP27A1Q02318 531 aa23.82■■□□□ 1.4
TRAPPC4-210ENST00000531290 TRPC3Q13507 836 aa23.82■■□□□ 1.4
TRAPPC4-210ENST00000531290 ZNF268Q14587 947 aaPredicted RBP23.82■■□□□ 1.4
TRAPPC4-210ENST00000531290 BMT2Q1RMZ1 405 aa23.82■■□□□ 1.4
TRAPPC4-210ENST00000531290 Q6ZS52 159 aa23.82■■□□□ 1.4
TRAPPC4-210ENST00000531290 ERMP1Q7Z2K6 904 aa23.82■■□□□ 1.4
TRAPPC4-210ENST00000531290 GPR161Q8N6U8 529 aaKnown RBP23.82■■□□□ 1.4
TRAPPC4-210ENST00000531290 GOLGA5Q8TBA6 731 aa23.82■■□□□ 1.4
TRAPPC4-210ENST00000531290 MYLPFQ96A32 169 aa23.82■■□□□ 1.4
TRAPPC4-210ENST00000531290 EBF3Q9H4W6 596 aa23.82■■□□□ 1.4
TRAPPC4-210ENST00000531290 MIA3Q5JRA6 1907 aa23.81■■□□□ 1.4
TRAPPC4-210ENST00000531290 WDR87Q6ZQQ6 2873 aa23.81■■□□□ 1.4
TRAPPC4-210ENST00000531290 TRAV19A0A0A6YYK7 116 aa23.81■■□□□ 1.4
TRAPPC4-210ENST00000531290 EXOC3O60645 756 aa23.81■■□□□ 1.4
TRAPPC4-210ENST00000531290 CKMP06732 381 aa23.81■■□□□ 1.4
TRAPPC4-210ENST00000531290 FAM163BP0C2L3 166 aa23.81■■□□□ 1.4
TRAPPC4-210ENST00000531290 USP17L7P0C7H9 530 aa23.81■■□□□ 1.4
TRAPPC4-210ENST00000531290 SLFN14P0C7P3 912 aa23.81■■□□□ 1.4
TRAPPC4-210ENST00000531290 BDNFP23560 247 aa23.81■■□□□ 1.4
TRAPPC4-210ENST00000531290 PKP1Q13835 747 aa23.81■■□□□ 1.4
TRAPPC4-210ENST00000531290 CCINQ13939 588 aa23.81■■□□□ 1.4
TRAPPC4-210ENST00000531290 PDGFRLQ15198 375 aa23.81■■□□□ 1.4
TRAPPC4-210ENST00000531290 WDR72Q3MJ13 1102 aa23.81■■□□□ 1.4
TRAPPC4-210ENST00000531290 TRIM68Q6AZZ1 485 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms