RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 EPCAMP16422 314 aa17.98■□□□□ 0.47
SF3B2-211ENST00000531041 ELF1P32519 619 aa17.98■□□□□ 0.47
SF3B2-211ENST00000531041 BPIFB4P59827 614 aa17.98■□□□□ 0.47
SF3B2-211ENST00000531041 CYP27A1Q02318 531 aa17.98■□□□□ 0.47
SF3B2-211ENST00000531041 PTK2Q05397 1052 aa17.98■□□□□ 0.47
SF3B2-211ENST00000531041 TRIM14Q14142 442 aa17.98■□□□□ 0.47
SF3B2-211ENST00000531041 SGO2Q562F6 1265 aa17.98■□□□□ 0.47
SF3B2-211ENST00000531041 ARHGAP17Q68EM7 881 aa17.98■□□□□ 0.47
SF3B2-211ENST00000531041 TMEM184AQ6ZMB5 413 aa17.98■□□□□ 0.47
SF3B2-211ENST00000531041 FMNL3Q8IVF7 1028 aa17.98■□□□□ 0.47
SF3B2-211ENST00000531041 FUKQ8N0W3 1084 aa17.98■□□□□ 0.47
SF3B2-211ENST00000531041 KREMEN2Q8NCW0 462 aa17.98■□□□□ 0.47
SF3B2-211ENST00000531041 HNRNPABQ99729 332 aaKnown RBP17.98■□□□□ 0.47
SF3B2-211ENST00000531041 IGFLR1Q9H665 355 aa17.98■□□□□ 0.47
SF3B2-211ENST00000531041 FAM49BQ9NUQ9 324 aa17.98■□□□□ 0.47
SF3B2-211ENST00000531041 ABI2Q9NYB9 513 aaPredicted RBP17.98■□□□□ 0.47
SF3B2-211ENST00000531041 DOCK6Q96HP0 2047 aa17.98■□□□□ 0.47
SF3B2-211ENST00000531041 SEC24AO95486 1093 aa17.98■□□□□ 0.47
SF3B2-211ENST00000531041 SPATA31D3P0C874 917 aa17.98■□□□□ 0.47
SF3B2-211ENST00000531041 CCDC130P13994 396 aa17.98■□□□□ 0.47
SF3B2-211ENST00000531041 MAGEA11P43364 429 aa17.98■□□□□ 0.47
SF3B2-211ENST00000531041 DUSP4Q13115 394 aa17.98■□□□□ 0.47
SF3B2-211ENST00000531041 ADAM15Q13444 863 aa17.98■□□□□ 0.47
SF3B2-211ENST00000531041 COL19A1Q14993 1142 aa17.98■□□□□ 0.47
SF3B2-211ENST00000531041 PPP1R26Q5T8A7 1209 aaPredicted RBP17.98■□□□□ 0.47
SF3B2-211ENST00000531041 SPATA31D4Q6ZUB0 917 aa17.98■□□□□ 0.47
SF3B2-211ENST00000531041 PAQR9Q6ZVX9 377 aa17.98■□□□□ 0.47
SF3B2-211ENST00000531041 ZNF397Q8NF99 534 aaPredicted RBP17.98■□□□□ 0.47
SF3B2-211ENST00000531041 VN1R2Q8NFZ6 395 aa17.98■□□□□ 0.47
SF3B2-211ENST00000531041 SLC2A14Q8TDB8 520 aa17.98■□□□□ 0.47
SF3B2-211ENST00000531041 CRISPLD1Q9H336 500 aa17.98■□□□□ 0.47
SF3B2-211ENST00000531041 CYP4F11Q9HBI6 524 aa17.98■□□□□ 0.47
SF3B2-211ENST00000531041 MAN1C1Q9NR34 630 aa17.98■□□□□ 0.47
SF3B2-211ENST00000531041 DENND4CQ5VZ89 1909 aa17.97■□□□□ 0.47
SF3B2-211ENST00000531041 ATP8B3O60423 1300 aa17.97■□□□□ 0.47
SF3B2-211ENST00000531041 CLDN5O00501 218 aa17.97■□□□□ 0.47
SF3B2-211ENST00000531041 ADCY5O95622 1261 aa17.97■□□□□ 0.47
SF3B2-211ENST00000531041 GLP2RO95838 553 aa17.97■□□□□ 0.47
SF3B2-211ENST00000531041 CD19P15391 556 aa17.97■□□□□ 0.47
SF3B2-211ENST00000531041 CYP2F1P24903 491 aa17.97■□□□□ 0.47
SF3B2-211ENST00000531041 GNA15P30679 374 aa17.97■□□□□ 0.47
SF3B2-211ENST00000531041 TUFMP49411 452 aaKnown RBP17.97■□□□□ 0.47
SF3B2-211ENST00000531041 CDR1P51861 262 aa17.97■□□□□ 0.47
SF3B2-211ENST00000531041 ZBED6P86452 979 aa17.97■□□□□ 0.47
SF3B2-211ENST00000531041 GSE1Q14687 1217 aa17.97■□□□□ 0.47
SF3B2-211ENST00000531041 STILQ15468 1287 aa17.97■□□□□ 0.47
SF3B2-211ENST00000531041 CTC1Q2NKJ3 1217 aa17.97■□□□□ 0.47
SF3B2-211ENST00000531041 ELMSAN1Q6PJG2 1045 aa17.97■□□□□ 0.47
SF3B2-211ENST00000531041 VSTM1Q6UX27 236 aa17.97■□□□□ 0.47
SF3B2-211ENST00000531041 CCDC149Q6ZUS6 474 aa17.97■□□□□ 0.47
SF3B2-211ENST00000531041 TMC6Q7Z403 805 aa17.97■□□□□ 0.47
SF3B2-211ENST00000531041 FAM35AQ86V20 835 aa17.97■□□□□ 0.47
SF3B2-211ENST00000531041 MICALL1Q8N3F8 863 aa17.97■□□□□ 0.47
SF3B2-211ENST00000531041 TTC9BQ8N6N2 239 aa17.97■□□□□ 0.47
SF3B2-211ENST00000531041 ZNF606Q8WXB4 792 aa17.97■□□□□ 0.47
SF3B2-211ENST00000531041 TFAP2BQ92481 460 aa17.97■□□□□ 0.47
SF3B2-211ENST00000531041 CASP10Q92851 521 aa17.97■□□□□ 0.47
SF3B2-211ENST00000531041 NUCKS1Q9H1E3 243 aaKnown RBP17.97■□□□□ 0.47
SF3B2-211ENST00000531041 ACP6Q9NPH0 428 aa17.97■□□□□ 0.47
SF3B2-211ENST00000531041 LUC7L2Q9Y383 392 aaKnown RBP17.97■□□□□ 0.47
SF3B2-211ENST00000531041 LRRC53A6NM62 1247 aa17.96■□□□□ 0.47
SF3B2-211ENST00000531041 O00370 1275 aa17.96■□□□□ 0.47
SF3B2-211ENST00000531041 PRRG1O14668 218 aa17.96■□□□□ 0.47
SF3B2-211ENST00000531041 LINC01565O15544 149 aa17.96■□□□□ 0.47
SF3B2-211ENST00000531041 GFPT2O94808 682 aa17.96■□□□□ 0.47
SF3B2-211ENST00000531041 HAPLN1P10915 354 aaPredicted RBP17.96■□□□□ 0.47
SF3B2-211ENST00000531041 BDNFP23560 247 aa17.96■□□□□ 0.47
SF3B2-211ENST00000531041 BRD2P25440 801 aaKnown RBP17.96■□□□□ 0.47
SF3B2-211ENST00000531041 CDC25BP30305 580 aa17.96■□□□□ 0.47
SF3B2-211ENST00000531041 CASP14P31944 242 aa17.96■□□□□ 0.47
SF3B2-211ENST00000531041 RBM10P98175 930 aaKnown RBP17.96■□□□□ 0.47
SF3B2-211ENST00000531041 TBX2Q13207 712 aaPredicted RBP17.96■□□□□ 0.47
SF3B2-211ENST00000531041 CNGA2Q16280 664 aa17.96■□□□□ 0.47
SF3B2-211ENST00000531041 LIN9Q5TKA1 542 aa17.96■□□□□ 0.47
SF3B2-211ENST00000531041 LLGL2Q6P1M3 1020 aa17.96■□□□□ 0.47
SF3B2-211ENST00000531041 SLC47A2Q86VL8 602 aa17.96■□□□□ 0.47
SF3B2-211ENST00000531041 CPLX3Q8WVH0 158 aa17.96■□□□□ 0.47
SF3B2-211ENST00000531041 SMARCD1Q96GM5 515 aa17.96■□□□□ 0.47
SF3B2-211ENST00000531041 ZSWIM1Q9BR11 485 aa17.96■□□□□ 0.47
SF3B2-211ENST00000531041 MED10Q9BTT4 135 aa17.96■□□□□ 0.47
SF3B2-211ENST00000531041 ZNF518BQ9C0D4 1074 aa17.96■□□□□ 0.47
SF3B2-211ENST00000531041 AIPL1Q9NZN9 384 aa17.96■□□□□ 0.47
SF3B2-211ENST00000531041 SLC27A5Q9Y2P5 690 aa17.96■□□□□ 0.47
SF3B2-211ENST00000531041 BRWD1Q9NSI6 2320 aa17.95■□□□□ 0.46
SF3B2-211ENST00000531041 MED7O43513 233 aa17.95■□□□□ 0.46
SF3B2-211ENST00000531041 OBSL1O75147 1896 aa17.95■□□□□ 0.46
SF3B2-211ENST00000531041 ZMYND10O75800 440 aa17.95■□□□□ 0.46
SF3B2-211ENST00000531041 CALCAP01258 141 aa17.95■□□□□ 0.46
SF3B2-211ENST00000531041 C8AP07357 584 aa17.95■□□□□ 0.46
SF3B2-211ENST00000531041 TPM1P09493 284 aa17.95■□□□□ 0.46
SF3B2-211ENST00000531041 CCDC172P0C7W6 258 aa17.95■□□□□ 0.46
SF3B2-211ENST00000531041 SRGAP2BP0DMP2 458 aa17.95■□□□□ 0.46
SF3B2-211ENST00000531041 CYP11B1P15538 503 aa17.95■□□□□ 0.46
SF3B2-211ENST00000531041 FERP16591 822 aa17.95■□□□□ 0.46
SF3B2-211ENST00000531041 ADORA2BP29275 332 aa17.95■□□□□ 0.46
SF3B2-211ENST00000531041 HOXA9P31269 272 aa17.95■□□□□ 0.46
SF3B2-211ENST00000531041 MRE11P49959 708 aa17.95■□□□□ 0.46
SF3B2-211ENST00000531041 MEA1Q16626 185 aa17.95■□□□□ 0.46
SF3B2-211ENST00000531041 LCLAT1Q6UWP7 414 aa17.95■□□□□ 0.46
SF3B2-211ENST00000531041 IRF2BP2Q7Z5L9 587 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms