RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 THAP9Q9H5L6 903 aa7.52□□□□□ -1.2
CTNND1-229ENST00000531014 LRRC4BQ9NT99 713 aa7.52□□□□□ -1.2
CTNND1-229ENST00000531014 POLR3EQ9NVU0 708 aa7.52□□□□□ -1.2
CTNND1-229ENST00000531014 MLXQ9UH92 298 aa7.52□□□□□ -1.2
CTNND1-229ENST00000531014 HPCAL4Q9UM19 191 aa7.52□□□□□ -1.2
CTNND1-229ENST00000531014 MRPL11Q9Y3B7 192 aaKnown RBP7.52□□□□□ -1.2
CTNND1-229ENST00000531014 MYL1P05976 194 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 RCVRNP35243 200 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 CACNA2D1P54289 1103 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 RAD23AP54725 363 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 ALDH6A1Q02252 535 aaKnown RBP7.52□□□□□ -1.21
CTNND1-229ENST00000531014 CHRNB3Q05901 458 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 OCLNQ16625 522 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 ARHGEF16Q5VV41 709 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 PCNX4Q63HM2 1172 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 CYB5D1Q6P9G0 228 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 SYTL1Q8IYJ3 562 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 ASIC4Q96FT7 647 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 GCNAQ96QF7 691 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 ECSITQ9BQ95 431 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 ROGDIQ9GZN7 287 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 SLITRK2Q9H156 845 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 RIC8BQ9NVN3 520 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 ASNSD1Q9NWL6 643 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 POLG2Q9UHN1 485 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 A0A0X1KG70 313 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 SGSM2O43147 1006 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 PALMO75781 387 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 JAK1P23458 1154 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 GTF2H1P32780 548 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 PTGS2P35354 604 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 FKBP1AP62942 108 aaKnown RBP7.52□□□□□ -1.21
CTNND1-229ENST00000531014 TUBA1BP68363 451 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 PRKCQQ04759 706 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 BST2Q10589 180 aaKnown RBP7.52□□□□□ -1.21
CTNND1-229ENST00000531014 STX5Q13190 355 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 PPIL2Q13356 520 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 SURF1Q15526 300 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 TKFCQ3LXA3 575 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 TUBA1AQ71U36 451 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 C11orf74Q86VG3 221 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 CDKL3Q8IVW4 592 aaPredicted RBP7.52□□□□□ -1.21
CTNND1-229ENST00000531014 SUGP1Q8IWZ8 645 aaKnown RBP7.52□□□□□ -1.21
CTNND1-229ENST00000531014 CYP4Z2PQ8N1L4 340 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 FAM151AQ8WW52 585 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 FAM227BQ96M60 508 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 CCSER2Q9H7U1 834 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 PPCSQ9HAB8 311 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 ALG13Q9NP73 1137 aaKnown RBP7.52□□□□□ -1.21
CTNND1-229ENST00000531014 HSPBP1Q9NZL4 362 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 ZNF70Q9UC06 446 aaPredicted RBP7.52□□□□□ -1.21
CTNND1-229ENST00000531014 TTC7AQ9ULT0 858 aaPredicted RBP7.52□□□□□ -1.21
CTNND1-229ENST00000531014 ZNF879B4DU55 563 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 LAD1O00515 517 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 KPNA6O60684 536 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 FAM58BPP0C7Q3 252 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 GRK4P32298 578 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 GPR1P46091 355 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 VEGFBP49765 207 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 ACTR2P61160 394 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 PPATQ06203 517 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 RESTQ13127 1097 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 ORC2Q13416 577 aaPredicted RBP7.52□□□□□ -1.21
CTNND1-229ENST00000531014 HEATR6Q6AI08 1181 aaKnown RBP7.52□□□□□ -1.21
CTNND1-229ENST00000531014 MRPL50Q8N5N7 158 aaKnown RBP7.52□□□□□ -1.21
CTNND1-229ENST00000531014 TSPAN17Q96FV3 270 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 PPP1R36Q96LQ0 422 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 PSTPIP2Q9H939 334 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 EPB41L4AQ9HCS5 686 aaPredicted RBP7.52□□□□□ -1.21
CTNND1-229ENST00000531014 ZNF304Q9HCX3 659 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 CMTM6Q9NX76 183 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 DPP7Q9UHL4 492 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 PHF11Q9UIL8 331 aa7.52□□□□□ -1.21
CTNND1-229ENST00000531014 H3BMM5 538 aa7.51□□□□□ -1.21
CTNND1-229ENST00000531014 CHL1O00533 1208 aa7.51□□□□□ -1.21
CTNND1-229ENST00000531014 SSNA1O43805 119 aa7.51□□□□□ -1.21
CTNND1-229ENST00000531014 CHN1P15882 459 aa7.51□□□□□ -1.21
CTNND1-229ENST00000531014 S100A2P29034 98 aa7.51□□□□□ -1.21
CTNND1-229ENST00000531014 COPAP53621 1224 aa7.51□□□□□ -1.21
CTNND1-229ENST00000531014 EIF3EP60228 445 aaKnown RBP7.51□□□□□ -1.21
CTNND1-229ENST00000531014 GPS1Q13098 491 aa7.51□□□□□ -1.21
CTNND1-229ENST00000531014 NCAPHQ15003 741 aa7.51□□□□□ -1.21
CTNND1-229ENST00000531014 CDO1Q16878 200 aa7.51□□□□□ -1.21
CTNND1-229ENST00000531014 LRRC24Q50LG9 513 aa7.51□□□□□ -1.21
CTNND1-229ENST00000531014 COBLL1Q53SF7 1204 aa7.51□□□□□ -1.21
CTNND1-229ENST00000531014 ZNF658Q5TYW1 1059 aaPredicted RBP7.51□□□□□ -1.21
CTNND1-229ENST00000531014 OLFML2AQ68BL7 652 aa7.51□□□□□ -1.21
CTNND1-229ENST00000531014 SCARA3Q6AZY7 606 aa7.51□□□□□ -1.21
CTNND1-229ENST00000531014 LRIG3Q6UXM1 1119 aa7.51□□□□□ -1.21
CTNND1-229ENST00000531014 LRRC31Q6UY01 552 aa7.51□□□□□ -1.21
CTNND1-229ENST00000531014 LRRC6Q86X45 466 aa7.51□□□□□ -1.21
CTNND1-229ENST00000531014 C10orf53Q8N6V4 93 aa7.51□□□□□ -1.21
CTNND1-229ENST00000531014 VPS33AQ96AX1 596 aa7.51□□□□□ -1.21
CTNND1-229ENST00000531014 HHIPL1Q96JK4 782 aa7.51□□□□□ -1.21
CTNND1-229ENST00000531014 KLHL32Q96NJ5 620 aa7.51□□□□□ -1.21
CTNND1-229ENST00000531014 TSPAN18Q96SJ8 248 aa7.51□□□□□ -1.21
CTNND1-229ENST00000531014 SPATA16Q9BXB7 569 aa7.51□□□□□ -1.21
CTNND1-229ENST00000531014 OSBPL8Q9BZF1 889 aa7.51□□□□□ -1.21
CTNND1-229ENST00000531014 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.51□□□□□ -1.21
CTNND1-229ENST00000531014 NXF1Q9UBU9 619 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms