RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 SGSM1Q2NKQ1 1148 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 C9orf131Q5VYM1 1079 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 TDRD10Q5VZ19 366 aaKnown RBP5.92□□□□□ -1.46
PCF11-205ENST00000530906 MPZL3Q6UWV2 235 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 CRELD2Q6UXH1 353 aaPredicted RBP5.92□□□□□ -1.46
PCF11-205ENST00000530906 LEKR1Q6ZMV7 388 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 RUFY4Q6ZNE9 571 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 CEP128Q6ZU80 1094 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 ANKRD23Q86SG2 305 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 SLC47A2Q86VL8 602 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 PHF13Q86YI8 300 aaPredicted RBP5.92□□□□□ -1.46
PCF11-205ENST00000530906 MCOLN2Q8IZK6 566 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 IQCKQ8N0W5 287 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 TMEM130Q8N3G9 435 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 ARFGAP2Q8N6H7 521 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 GPRC5AQ8NFJ5 357 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 FAM76AQ8TAV0 307 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 ZNF526Q8TF50 670 aaPredicted RBP5.92□□□□□ -1.46
PCF11-205ENST00000530906 PRPF31Q8WWY3 499 aaKnown RBP5.92□□□□□ -1.46
PCF11-205ENST00000530906 TMEM143Q96AN5 459 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 PLD4Q96BZ4 506 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 OPTNQ96CV9 577 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 ARHGEF26Q96DR7 871 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 MS4A14Q96JA4 679 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 SPATA33Q96N06 139 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 ACO2Q99798 780 aaKnown RBP5.92□□□□□ -1.46
PCF11-205ENST00000530906 SH2D3AQ9BRG2 576 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 PAGR1Q9BTK6 254 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 NUP85Q9BW27 656 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 NIF3L1Q9GZT8 377 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 FZD8Q9H461 694 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 OSGEPQ9NPF4 335 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 PRMT7Q9NVM4 692 aaPredicted RBP5.92□□□□□ -1.46
PCF11-205ENST00000530906 SLC5A4Q9NY91 659 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 CWC15Q9P013 229 aaKnown RBP5.92□□□□□ -1.46
PCF11-205ENST00000530906 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.92□□□□□ -1.46
PCF11-205ENST00000530906 CALCOCO1Q9P1Z2 691 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 VPS18Q9P253 973 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 RBPJLQ9UBG7 517 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 TNFSF13BQ9Y275 285 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 CEP83Q9Y592 693 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 KCNMB2Q9Y691 235 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 CNTNAP2Q9UHC6 1331 aa5.92□□□□□ -1.46
PCF11-205ENST00000530906 GOLGA6CA6NDK9 693 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 GLTPD2A6NH11 291 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 J3QW42 95 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 MYO1FO00160 1098 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 FSCN2O14926 492 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 MED7O43513 233 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 FAM189A1O60320 539 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 MMP20O60882 483 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 SHOX2O60902 331 aaPredicted RBP5.91□□□□□ -1.46
PCF11-205ENST00000530906 PPFIA4O75335 1185 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 ALX3O95076 343 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 SYF2O95926 243 aaKnown RBP5.91□□□□□ -1.46
PCF11-205ENST00000530906 GH1P01241 217 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 TNNC2P02585 160 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 MMEP08473 750 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 GOLGA6DP0CG33 693 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 TXNP10599 105 aaKnown RBP5.91□□□□□ -1.46
PCF11-205ENST00000530906 MCF2P10911 925 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 P4HA1P13674 534 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 ACO1P21399 889 aaKnown RBP5.91□□□□□ -1.46
PCF11-205ENST00000530906 TMOD1P28289 359 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 MAPK4P31152 587 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 ATICP31939 592 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 CDH5P33151 784 aaPredicted RBP5.91□□□□□ -1.46
PCF11-205ENST00000530906 CARSP49589 748 aaKnown RBP5.91□□□□□ -1.46
PCF11-205ENST00000530906 PEX5P50542 639 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 CDR1P51861 262 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 NLRP11P59045 1033 aaKnown RBP5.91□□□□□ -1.46
PCF11-205ENST00000530906 SLC7A5Q01650 507 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 DR1Q01658 176 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 CAV1Q03135 178 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 LMNB2Q03252 620 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 PRKG1Q13976 671 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 HLTFQ14527 1009 aaKnown RBP eCLIP5.91□□□□□ -1.46
PCF11-205ENST00000530906 PLCB4Q15147 1175 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 LCE3BQ5TA77 95 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 LRRC38Q5VT99 294 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 DUPD1Q68J44 220 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 MAMDC4Q6UXC1 1216 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 MON1BQ7L1V2 547 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 PALB2Q86YC2 1186 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 TREML1Q86YW5 311 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 KLHL7Q8IXQ5 586 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 UBR7Q8N806 425 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 ZSWIM2Q8NEG5 633 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 PPTC7Q8NI37 304 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.91□□□□□ -1.46
PCF11-205ENST00000530906 GRK7Q8WTQ7 553 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 HDAC7Q8WUI4 952 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 CASKIN2Q8WXE0 1202 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 KAT5Q92993 513 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 ANKRD36BP1Q96IX9 119 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 FGD4Q96M96 766 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 TSPAN18Q96SJ8 248 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 PCDHB18PQ96TA0 734 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 ERP44Q9BS26 406 aa5.91□□□□□ -1.46
PCF11-205ENST00000530906 TARS2Q9BW92 718 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms