RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 GTF3C2Q8WUA4 911 aaPredicted RBP18.1■□□□□ 0.49
BRCA2-204ENST00000530893 COPS5Q92905 334 aa18.1■□□□□ 0.49
BRCA2-204ENST00000530893 SGSM3Q96HU1 749 aa18.1■□□□□ 0.49
BRCA2-204ENST00000530893 ELAC2Q9BQ52 826 aaKnown RBP18.1■□□□□ 0.49
BRCA2-204ENST00000530893 MIS12Q9H081 205 aa18.1■□□□□ 0.49
BRCA2-204ENST00000530893 RNPEPQ9H4A4 650 aa18.1■□□□□ 0.49
BRCA2-204ENST00000530893 SENP1Q9P0U3 644 aa18.1■□□□□ 0.49
BRCA2-204ENST00000530893 CYTH4Q9UIA0 394 aa18.1■□□□□ 0.49
BRCA2-204ENST00000530893 EVPLQ92817 2033 aa18.1■□□□□ 0.49
BRCA2-204ENST00000530893 EXOC1LA0A1B0GW35 172 aa18.1■□□□□ 0.49
BRCA2-204ENST00000530893 GOLGA8SH3BPF8 625 aa18.1■□□□□ 0.49
BRCA2-204ENST00000530893 SGK1O00141 431 aa18.1■□□□□ 0.49
BRCA2-204ENST00000530893 STAU1O95793 577 aaKnown RBP18.1■□□□□ 0.49
BRCA2-204ENST00000530893 ITGB3P05106 788 aa18.1■□□□□ 0.49
BRCA2-204ENST00000530893 VDRP11473 427 aa18.1■□□□□ 0.49
BRCA2-204ENST00000530893 KDELR1P24390 212 aa18.1■□□□□ 0.49
BRCA2-204ENST00000530893 HNRNPH1P31943 449 aaKnown RBP18.1■□□□□ 0.49
BRCA2-204ENST00000530893 SCTRP47872 440 aa18.1■□□□□ 0.49
BRCA2-204ENST00000530893 AMHR2Q16671 573 aa18.1■□□□□ 0.49
BRCA2-204ENST00000530893 LINC01465Q8N7H1 131 aa18.1■□□□□ 0.49
BRCA2-204ENST00000530893 CXorf38Q8TB03 319 aa18.1■□□□□ 0.49
BRCA2-204ENST00000530893 MAML1Q92585 1016 aa18.1■□□□□ 0.49
BRCA2-204ENST00000530893 MCRS1Q96EZ8 462 aa18.1■□□□□ 0.49
BRCA2-204ENST00000530893 CPXM1Q96SM3 734 aa18.1■□□□□ 0.49
BRCA2-204ENST00000530893 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.1■□□□□ 0.49
BRCA2-204ENST00000530893 OAS1P00973 400 aaKnown RBP18.09■□□□□ 0.49
BRCA2-204ENST00000530893 INSRRP14616 1297 aa18.09■□□□□ 0.49
BRCA2-204ENST00000530893 CREB1P16220 341 aa18.09■□□□□ 0.49
BRCA2-204ENST00000530893 RAP1GAPP47736 663 aa18.09■□□□□ 0.49
BRCA2-204ENST00000530893 ARHGAP1Q07960 439 aa18.09■□□□□ 0.49
BRCA2-204ENST00000530893 MYO1EQ12965 1108 aa18.09■□□□□ 0.49
BRCA2-204ENST00000530893 JADE1Q6IE81 842 aa18.09■□□□□ 0.49
BRCA2-204ENST00000530893 CYP4F22Q6NT55 531 aa18.09■□□□□ 0.49
BRCA2-204ENST00000530893 PRUNE1Q86TP1 453 aa18.09■□□□□ 0.49
BRCA2-204ENST00000530893 TMEM192Q8IY95 271 aa18.09■□□□□ 0.49
BRCA2-204ENST00000530893 CYP4X1Q8N118 509 aa18.09■□□□□ 0.49
BRCA2-204ENST00000530893 ARFGAP1Q8N6T3 406 aa18.09■□□□□ 0.49
BRCA2-204ENST00000530893 JOSD2Q8TAC2 188 aa18.09■□□□□ 0.49
BRCA2-204ENST00000530893 MAGEB18Q96M61 343 aa18.09■□□□□ 0.49
BRCA2-204ENST00000530893 TMEM121Q9BTD3 319 aa18.09■□□□□ 0.49
BRCA2-204ENST00000530893 SDCBP2Q9H190 292 aa18.09■□□□□ 0.49
BRCA2-204ENST00000530893 FETUBQ9UGM5 382 aa18.09■□□□□ 0.49
BRCA2-204ENST00000530893 KIAA1257Q9ULG3 409 aa18.09■□□□□ 0.49
BRCA2-204ENST00000530893 FARP1Q9Y4F1 1045 aaPredicted RBP18.09■□□□□ 0.49
BRCA2-204ENST00000530893 RASA4BC9J798 803 aa18.08■□□□□ 0.49
BRCA2-204ENST00000530893 RASA4O43374 803 aa18.08■□□□□ 0.49
BRCA2-204ENST00000530893 RASSF9O75901 435 aa18.08■□□□□ 0.49
BRCA2-204ENST00000530893 DNAJC8O75937 253 aaPredicted RBP18.08■□□□□ 0.49
BRCA2-204ENST00000530893 RNF8O76064 485 aa18.08■□□□□ 0.49
BRCA2-204ENST00000530893 LGALS2P05162 132 aa18.08■□□□□ 0.49
BRCA2-204ENST00000530893 ZSCAN5DPP0CG00 497 aa18.08■□□□□ 0.49
BRCA2-204ENST00000530893 CETPP11597 493 aa18.08■□□□□ 0.49
BRCA2-204ENST00000530893 PCK1P35558 622 aa18.08■□□□□ 0.49
BRCA2-204ENST00000530893 CDH8P55286 799 aa18.08■□□□□ 0.49
BRCA2-204ENST00000530893 LRRC14Q15048 493 aa18.08■□□□□ 0.49
BRCA2-204ENST00000530893 WDR78Q5VTH9 848 aa18.08■□□□□ 0.49
BRCA2-204ENST00000530893 CDR2LQ86X02 465 aaPredicted RBP18.08■□□□□ 0.49
BRCA2-204ENST00000530893 SRRM1Q8IYB3 904 aaKnown RBP18.08■□□□□ 0.49
BRCA2-204ENST00000530893 CMASQ8NFW8 434 aaPredicted RBP18.08■□□□□ 0.49
BRCA2-204ENST00000530893 PRCCQ92733 491 aaPredicted RBP18.08■□□□□ 0.49
BRCA2-204ENST00000530893 EMID1Q96A84 441 aaPredicted RBP18.08■□□□□ 0.49
BRCA2-204ENST00000530893 OPTNQ96CV9 577 aa18.08■□□□□ 0.49
BRCA2-204ENST00000530893 CDCA5Q96FF9 252 aa18.08■□□□□ 0.49
BRCA2-204ENST00000530893 PDZD7Q9H5P4 517 aa18.08■□□□□ 0.49
BRCA2-204ENST00000530893 PDGFCQ9NRA1 345 aa18.08■□□□□ 0.49
BRCA2-204ENST00000530893 TBK1Q9UHD2 729 aa18.08■□□□□ 0.49
BRCA2-204ENST00000530893 SLC24A2Q9UI40 661 aa18.08■□□□□ 0.49
BRCA2-204ENST00000530893 ITGA11Q9UKX5 1188 aa18.08■□□□□ 0.49
BRCA2-204ENST00000530893 C2CD2Q9Y426 696 aa18.08■□□□□ 0.49
BRCA2-204ENST00000530893 USP15Q9Y4E8 981 aaPredicted RBP18.08■□□□□ 0.49
BRCA2-204ENST00000530893 TCP11X1B4DZS4 312 aa18.08■□□□□ 0.48
BRCA2-204ENST00000530893 CST8O60676 142 aa18.08■□□□□ 0.48
BRCA2-204ENST00000530893 MICAL2O94851 1124 aa18.08■□□□□ 0.48
BRCA2-204ENST00000530893 STX2P32856 288 aa18.08■□□□□ 0.48
BRCA2-204ENST00000530893 OTUD4Q01804 1114 aaKnown RBP18.08■□□□□ 0.48
BRCA2-204ENST00000530893 INCA1Q0VD86 236 aa18.08■□□□□ 0.48
BRCA2-204ENST00000530893 XRCC4Q13426 336 aa18.08■□□□□ 0.48
BRCA2-204ENST00000530893 ARMCX2Q7L311 632 aa18.08■□□□□ 0.48
BRCA2-204ENST00000530893 TRPM8Q7Z2W7 1104 aa18.08■□□□□ 0.48
BRCA2-204ENST00000530893 PPIL6Q8IXY8 311 aa18.08■□□□□ 0.48
BRCA2-204ENST00000530893 ANKRD42Q8N9B4 389 aa18.08■□□□□ 0.48
BRCA2-204ENST00000530893 ACTL9Q8TC94 416 aa18.08■□□□□ 0.48
BRCA2-204ENST00000530893 MGARPQ8TDB4 240 aa18.08■□□□□ 0.48
BRCA2-204ENST00000530893 ACSF2Q96CM8 615 aaPredicted RBP18.08■□□□□ 0.48
BRCA2-204ENST00000530893 ZNF668Q96K58 619 aaPredicted RBP18.08■□□□□ 0.48
BRCA2-204ENST00000530893 SMYD3Q9H7B4 428 aa18.08■□□□□ 0.48
BRCA2-204ENST00000530893 ZWILCHQ9H900 591 aa18.08■□□□□ 0.48
BRCA2-204ENST00000530893 VTA1Q9NP79 307 aa18.08■□□□□ 0.48
BRCA2-204ENST00000530893 METTL5Q9NRN9 209 aaKnown RBP18.08■□□□□ 0.48
BRCA2-204ENST00000530893 ASNSD1Q9NWL6 643 aa18.08■□□□□ 0.48
BRCA2-204ENST00000530893 A0A087WZ62 844 aa18.07■□□□□ 0.48
BRCA2-204ENST00000530893 FAM47DPA6NHR8 397 aa18.07■□□□□ 0.48
BRCA2-204ENST00000530893 APOC4-APOC2K7ER74 178 aa18.07■□□□□ 0.48
BRCA2-204ENST00000530893 SUN1O94901 812 aa18.07■□□□□ 0.48
BRCA2-204ENST00000530893 GH1P01241 217 aa18.07■□□□□ 0.48
BRCA2-204ENST00000530893 APOC2P02655 101 aa18.07■□□□□ 0.48
BRCA2-204ENST00000530893 ERBB2P04626 1255 aa18.07■□□□□ 0.48
BRCA2-204ENST00000530893 ETS1P14921 441 aa18.07■□□□□ 0.48
BRCA2-204ENST00000530893 IL1R2P27930 398 aa18.07■□□□□ 0.48
BRCA2-204ENST00000530893 GPD2P43304 727 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms