RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 SYCP2LQ5T4T6 812 aa14.8□□□□□ -0.04
PCF11-204ENST00000530660 LPCAT2Q7L5N7 544 aa14.8□□□□□ -0.04
PCF11-204ENST00000530660 ALDH16A1Q8IZ83 802 aa14.8□□□□□ -0.04
PCF11-204ENST00000530660 GALNT4Q8N4A0 578 aa14.8□□□□□ -0.04
PCF11-204ENST00000530660 PYROXD1Q8WU10 500 aa14.8□□□□□ -0.04
PCF11-204ENST00000530660 NSUN4Q96CB9 384 aaKnown RBP14.8□□□□□ -0.04
PCF11-204ENST00000530660 ZNF395Q9H8N7 513 aaPredicted RBP14.8□□□□□ -0.04
PCF11-204ENST00000530660 JAG2Q9Y219 1238 aa14.8□□□□□ -0.04
PCF11-204ENST00000530660 AP4B1Q9Y6B7 739 aa14.8□□□□□ -0.04
PCF11-204ENST00000530660 ZNF804BA4D1E1 1349 aa14.8□□□□□ -0.04
PCF11-204ENST00000530660 FOXN3O00409 490 aaPredicted RBP14.8□□□□□ -0.04
PCF11-204ENST00000530660 KRT18P05783 430 aaKnown RBP14.8□□□□□ -0.04
PCF11-204ENST00000530660 CYP19A1P11511 503 aaPredicted RBP14.8□□□□□ -0.04
PCF11-204ENST00000530660 IL2RBP14784 551 aa14.8□□□□□ -0.04
PCF11-204ENST00000530660 CAV1Q03135 178 aa14.8□□□□□ -0.04
PCF11-204ENST00000530660 PDAP1Q13442 181 aaKnown RBP14.8□□□□□ -0.04
PCF11-204ENST00000530660 TCHHL1Q5QJ38 904 aaPredicted RBP14.8□□□□□ -0.04
PCF11-204ENST00000530660 C6orf52Q5T4I8 152 aa14.8□□□□□ -0.04
PCF11-204ENST00000530660 C6orf50Q9HD87 102 aa14.8□□□□□ -0.04
PCF11-204ENST00000530660 GIT1Q9Y2X7 761 aa14.8□□□□□ -0.04
PCF11-204ENST00000530660 IVNS1ABPQ9Y6Y0 642 aa14.8□□□□□ -0.04
PCF11-204ENST00000530660 COL22A1Q8NFW1 1626 aaPredicted RBP14.8□□□□□ -0.04
PCF11-204ENST00000530660 FSCN2O14926 492 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 XPO1O14980 1071 aaKnown RBP14.79□□□□□ -0.04
PCF11-204ENST00000530660 DENRO43583 198 aaKnown RBP14.79□□□□□ -0.04
PCF11-204ENST00000530660 ALDH1A3P47895 512 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 GPC5P78333 572 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 XIAPP98170 497 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 KCNA1Q09470 495 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 APOFQ13790 326 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 SPIDRQ14159 915 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 CCDC153Q494R4 210 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 KYAT3Q6YP21 454 aaKnown RBP14.79□□□□□ -0.04
PCF11-204ENST00000530660 GSDMBQ8TAX9 411 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 GRIN3AQ8TCU5 1115 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 SHCBP1LQ9BZQ2 653 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 CYP4F11Q9HBI6 524 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 POTECB2RU33 542 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 ABHD2P08910 425 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 STIP1P31948 543 aaKnown RBP14.79□□□□□ -0.04
PCF11-204ENST00000530660 CPOXP36551 454 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 FXR2P51116 673 aaKnown RBP eCLIP14.79□□□□□ -0.044e-6■■■■□ 23.1
PCF11-204ENST00000530660 NEK2P51955 445 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 MTM1Q13496 603 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 PRKD1Q15139 912 aaPredicted RBP14.79□□□□□ -0.04
PCF11-204ENST00000530660 DEPDC1Q5TB30 811 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 SNRNP48Q6IEG0 339 aaKnown RBP14.79□□□□□ -0.04
PCF11-204ENST00000530660 KRT27Q7Z3Y8 459 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 ZFPM1Q8IX07 1006 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 CENPSQ8N2Z9 138 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 SLC44A5Q8NCS7 719 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 ACTRT2Q8TDY3 377 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 STARD8Q92502 1023 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 ZNF512Q96ME7 567 aaPredicted RBP14.79□□□□□ -0.04
PCF11-204ENST00000530660 KIAA1024Q9UPX6 916 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 DYTNA2CJ06 578 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 UBAP1LF5GYI3 381 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 NELFEP18615 380 aaKnown RBP14.79□□□□□ -0.04
PCF11-204ENST00000530660 BORAQ6PGQ7 559 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 TDRPQ86YL5 185 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 LZTR1Q8N653 840 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 AGPAT1Q99943 283 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 DCLK3Q9C098 648 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 VPS11Q9H270 941 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 THEGQ9P2T0 379 aa14.79□□□□□ -0.04
PCF11-204ENST00000530660 A0A1W2PQ67 120 aa14.78□□□□□ -0.04
PCF11-204ENST00000530660 ZBTB46Q86UZ6 589 aa14.78□□□□□ -0.04
PCF11-204ENST00000530660 ANKMY2Q8IV38 441 aa14.78□□□□□ -0.04
PCF11-204ENST00000530660 GLIS1Q8NBF1 620 aa14.78□□□□□ -0.04
PCF11-204ENST00000530660 PSPC1Q8WXF1 523 aaKnown RBP14.78□□□□□ -0.04
PCF11-204ENST00000530660 FAM111AQ96PZ2 611 aa14.78□□□□□ -0.04
PCF11-204ENST00000530660 OSBPL10Q9BXB5 764 aa14.78□□□□□ -0.04
PCF11-204ENST00000530660 ZNF696Q9H7X3 374 aa14.78□□□□□ -0.04
PCF11-204ENST00000530660 TBC1D23Q9NUY8 699 aa14.78□□□□□ -0.04
PCF11-204ENST00000530660 PSMC3IPQ9P2W1 217 aaPredicted RBP14.78□□□□□ -0.04
PCF11-204ENST00000530660 CDH3P22223 829 aa14.78□□□□□ -0.04
PCF11-204ENST00000530660 PRDX5P30044 214 aa14.78□□□□□ -0.04
PCF11-204ENST00000530660 OASLQ15646 514 aaKnown RBP14.78□□□□□ -0.04
PCF11-204ENST00000530660 AHI1Q8N157 1196 aa14.78□□□□□ -0.04
PCF11-204ENST00000530660 REXO1Q8N1G1 1221 aaKnown RBP14.78□□□□□ -0.04
PCF11-204ENST00000530660 MORC4Q8TE76 937 aa14.78□□□□□ -0.04
PCF11-204ENST00000530660 TMEM47Q9BQJ4 181 aa14.78□□□□□ -0.04
PCF11-204ENST00000530660 KAT6AQ92794 2004 aa14.78□□□□□ -0.04
PCF11-204ENST00000530660 COL4A1P02462 1669 aa14.78□□□□□ -0.04
PCF11-204ENST00000530660 EDIL3O43854 480 aa14.77□□□□□ -0.04
PCF11-204ENST00000530660 NR3C1P04150 777 aa14.77□□□□□ -0.04
PCF11-204ENST00000530660 GNA11P29992 359 aa14.77□□□□□ -0.04
PCF11-204ENST00000530660 HADHBP55084 474 aaKnown RBP14.77□□□□□ -0.04
PCF11-204ENST00000530660 KNOP1Q1ED39 458 aaKnown RBP14.77□□□□□ -0.04
PCF11-204ENST00000530660 USP17L2Q6R6M4 530 aa14.77□□□□□ -0.04
PCF11-204ENST00000530660 ARID3BQ8IVW6 561 aaPredicted RBP14.77□□□□□ -0.04
PCF11-204ENST00000530660 MKNK2Q9HBH9 465 aa14.77□□□□□ -0.04
PCF11-204ENST00000530660 SOX13Q9UN79 622 aa14.77□□□□□ -0.04
PCF11-204ENST00000530660 NUB1Q9Y5A7 615 aa14.77□□□□□ -0.04
PCF11-204ENST00000530660 NUP98P52948 1817 aa14.77□□□□□ -0.04
PCF11-204ENST00000530660 H3BNX3 289 aa14.77□□□□□ -0.04
PCF11-204ENST00000530660 ZBTB11O95625 1053 aaPredicted RBP14.77□□□□□ -0.04
PCF11-204ENST00000530660 PLA2G4BP0C869 781 aa14.77□□□□□ -0.04
PCF11-204ENST00000530660 ZSCAN5DPP0CG00 497 aa14.77□□□□□ -0.04
PCF11-204ENST00000530660 TSPY3P0CV98 308 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms