RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 SHC3Q92529 594 aa22.69■■□□□ 1.22
CAPN1-220ENST00000530567 TMEM176AQ96HP8 235 aa22.69■■□□□ 1.22
CAPN1-220ENST00000530567 FUBP3Q96I24 572 aaKnown RBP eCLIP22.69■■□□□ 1.22
CAPN1-220ENST00000530567 FAM81BQ96LP2 452 aa22.69■■□□□ 1.22
CAPN1-220ENST00000530567 GPR88Q9GZN0 384 aa22.69■■□□□ 1.22
CAPN1-220ENST00000530567 FAM207AQ9NSI2 230 aaPredicted RBP22.69■■□□□ 1.22
CAPN1-220ENST00000530567 PCDHB4Q9Y5E5 795 aa22.69■■□□□ 1.22
CAPN1-220ENST00000530567 C2orf16Q68DN1 1984 aa22.68■■□□□ 1.22
CAPN1-220ENST00000530567 CLDN5O00501 218 aa22.68■■□□□ 1.22
CAPN1-220ENST00000530567 HAPLN1P10915 354 aaPredicted RBP22.68■■□□□ 1.22
CAPN1-220ENST00000530567 CCDC130P13994 396 aa22.68■■□□□ 1.22
CAPN1-220ENST00000530567 CYP2F1P24903 491 aa22.68■■□□□ 1.22
CAPN1-220ENST00000530567 MFAP3P55082 362 aa22.68■■□□□ 1.22
CAPN1-220ENST00000530567 CLUL1Q15846 466 aa22.68■■□□□ 1.22
CAPN1-220ENST00000530567 PPM1LQ5SGD2 360 aa22.68■■□□□ 1.22
CAPN1-220ENST00000530567 RARS2Q5T160 578 aaKnown RBP22.68■■□□□ 1.22
CAPN1-220ENST00000530567 ELMSAN1Q6PJG2 1045 aa22.68■■□□□ 1.22
CAPN1-220ENST00000530567 C4orf50Q6ZRC1 276 aa22.68■■□□□ 1.22
CAPN1-220ENST00000530567 SPATA2LQ8IUW3 424 aaPredicted RBP22.68■■□□□ 1.22
CAPN1-220ENST00000530567 FUKQ8N0W3 1084 aa22.68■■□□□ 1.22
CAPN1-220ENST00000530567 APOL5Q9BWW9 433 aa22.68■■□□□ 1.22
CAPN1-220ENST00000530567 ZNF518BQ9C0D4 1074 aa22.68■■□□□ 1.22
CAPN1-220ENST00000530567 FAM49BQ9NUQ9 324 aa22.68■■□□□ 1.22
CAPN1-220ENST00000530567 TMEM30AQ9NV96 361 aa22.68■■□□□ 1.22
CAPN1-220ENST00000530567 CDH22Q9UJ99 828 aa22.68■■□□□ 1.22
CAPN1-220ENST00000530567 HNRNPA1P09651 372 aaKnown RBP eCLIP22.67■■□□□ 1.22
CAPN1-220ENST00000530567 UBASH3AP57075 661 aa22.67■■□□□ 1.22
CAPN1-220ENST00000530567 CYP27A1Q02318 531 aa22.67■■□□□ 1.22
CAPN1-220ENST00000530567 ARHGAP44Q17R89 818 aa22.67■■□□□ 1.22
CAPN1-220ENST00000530567 TMC5Q6UXY8 1006 aa22.67■■□□□ 1.22
CAPN1-220ENST00000530567 RBBP8NLQ8NC74 664 aaPredicted RBP22.67■■□□□ 1.22
CAPN1-220ENST00000530567 SEPT5Q99719 369 aaPredicted RBP22.67■■□□□ 1.22
CAPN1-220ENST00000530567 IFNKQ9P0W0 207 aa22.67■■□□□ 1.22
CAPN1-220ENST00000530567 CD207Q9UJ71 328 aa22.67■■□□□ 1.22
CAPN1-220ENST00000530567 CCDC195A0A1B0GUA6 201 aa22.66■■□□□ 1.22
CAPN1-220ENST00000530567 A0A1W2PQC6 194 aa22.66■■□□□ 1.22
CAPN1-220ENST00000530567 POU2F2P09086 479 aa22.66■■□□□ 1.22
CAPN1-220ENST00000530567 ATF6P18850 670 aa22.66■■□□□ 1.22
CAPN1-220ENST00000530567 RFX1P22670 979 aa22.66■■□□□ 1.22
CAPN1-220ENST00000530567 BDNFP23560 247 aa22.66■■□□□ 1.22
CAPN1-220ENST00000530567 PBX1P40424 430 aa22.66■■□□□ 1.22
CAPN1-220ENST00000530567 MAGEA11P43364 429 aa22.66■■□□□ 1.22
CAPN1-220ENST00000530567 GPR15P49685 360 aa22.66■■□□□ 1.22
CAPN1-220ENST00000530567 CACNA2D1P54289 1103 aa22.66■■□□□ 1.22
CAPN1-220ENST00000530567 TFF2Q03403 129 aa22.66■■□□□ 1.22
CAPN1-220ENST00000530567 TWF1Q12792 350 aa22.66■■□□□ 1.22
CAPN1-220ENST00000530567 MGAT5BQ3V5L5 792 aa22.66■■□□□ 1.22
CAPN1-220ENST00000530567 FAM35AQ86V20 835 aa22.66■■□□□ 1.22
CAPN1-220ENST00000530567 SLC2A14Q8TDB8 520 aa22.66■■□□□ 1.22
CAPN1-220ENST00000530567 ANP32EQ9BTT0 268 aa22.66■■□□□ 1.22
CAPN1-220ENST00000530567 PRKD2Q9BZL6 878 aa22.66■■□□□ 1.22
CAPN1-220ENST00000530567 ADAM7Q9H2U9 754 aa22.66■■□□□ 1.22
CAPN1-220ENST00000530567 DOCK6Q96HP0 2047 aa22.66■■□□□ 1.22
CAPN1-220ENST00000530567 SPDYE4A6NLX3 237 aa22.65■■□□□ 1.22
CAPN1-220ENST00000530567 CCL16O15467 120 aa22.65■■□□□ 1.22
CAPN1-220ENST00000530567 CALCAP01258 141 aa22.65■■□□□ 1.22
CAPN1-220ENST00000530567 PAEPP09466 180 aa22.65■■□□□ 1.22
CAPN1-220ENST00000530567 PNMA6AP0CW24 399 aaPredicted RBP22.65■■□□□ 1.22
CAPN1-220ENST00000530567 TUFMP49411 452 aaKnown RBP22.65■■□□□ 1.22
CAPN1-220ENST00000530567 LEXMQ3ZCV2 418 aa22.65■■□□□ 1.22
CAPN1-220ENST00000530567 GPR149Q86SP6 731 aa22.65■■□□□ 1.22
CAPN1-220ENST00000530567 HNRNPABQ99729 332 aaKnown RBP22.65■■□□□ 1.22
CAPN1-220ENST00000530567 ZSWIM1Q9BR11 485 aa22.65■■□□□ 1.22
CAPN1-220ENST00000530567 CEP72Q9P209 647 aa22.65■■□□□ 1.22
CAPN1-220ENST00000530567 GRXCR2A6NFK2 248 aa22.65■■□□□ 1.22
CAPN1-220ENST00000530567 AP5Z1O43299 807 aa22.65■■□□□ 1.22
CAPN1-220ENST00000530567 KRT5P13647 590 aa22.65■■□□□ 1.22
CAPN1-220ENST00000530567 POLR2FP61218 127 aaKnown RBP22.65■■□□□ 1.22
CAPN1-220ENST00000530567 ITIH3Q06033 890 aa22.65■■□□□ 1.22
CAPN1-220ENST00000530567 DRAP1Q14919 205 aaPredicted RBP22.65■■□□□ 1.22
CAPN1-220ENST00000530567 PPP1R26Q5T8A7 1209 aaPredicted RBP22.65■■□□□ 1.22
CAPN1-220ENST00000530567 ARHGAP17Q68EM7 881 aa22.65■■□□□ 1.22
CAPN1-220ENST00000530567 SMYD5Q6GMV2 418 aa22.65■■□□□ 1.22
CAPN1-220ENST00000530567 VSTM1Q6UX27 236 aa22.65■■□□□ 1.22
CAPN1-220ENST00000530567 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.65■■□□□ 1.22
CAPN1-220ENST00000530567 TFAP2BQ92481 460 aa22.65■■□□□ 1.22
CAPN1-220ENST00000530567 SUSD6Q92537 303 aa22.65■■□□□ 1.22
CAPN1-220ENST00000530567 CYFIP2Q96F07 1278 aa22.65■■□□□ 1.22
CAPN1-220ENST00000530567 PCMTD1Q96MG8 357 aaPredicted RBP22.65■■□□□ 1.22
CAPN1-220ENST00000530567 HEXIM2Q96MH2 286 aaKnown RBP22.65■■□□□ 1.22
CAPN1-220ENST00000530567 XPO4Q9C0E2 1151 aaKnown RBP22.65■■□□□ 1.22
CAPN1-220ENST00000530567 THEGQ9P2T0 379 aa22.65■■□□□ 1.22
CAPN1-220ENST00000530567 FOXN3O00409 490 aaPredicted RBP22.64■■□□□ 1.21
CAPN1-220ENST00000530567 LRG1P02750 347 aa22.64■■□□□ 1.21
CAPN1-220ENST00000530567 JAM2P57087 298 aa22.64■■□□□ 1.21
CAPN1-220ENST00000530567 SMAD4Q13485 552 aaKnown RBP22.64■■□□□ 1.21
CAPN1-220ENST00000530567 RAPGEF1Q13905 1077 aa22.64■■□□□ 1.21
CAPN1-220ENST00000530567 DDR2Q16832 855 aa22.64■■□□□ 1.21
CAPN1-220ENST00000530567 SDHAF4Q5VUM1 108 aa22.64■■□□□ 1.21
CAPN1-220ENST00000530567 FAM71AQ8IYT1 594 aa22.64■■□□□ 1.21
CAPN1-220ENST00000530567 NEK11Q8NG66 645 aa22.64■■□□□ 1.21
CAPN1-220ENST00000530567 SMG7Q92540 1137 aaKnown RBP22.64■■□□□ 1.21
CAPN1-220ENST00000530567 STK33Q9BYT3 514 aa22.64■■□□□ 1.21
CAPN1-220ENST00000530567 ACP6Q9NPH0 428 aa22.64■■□□□ 1.21
CAPN1-220ENST00000530567 KRT82Q9NSB4 513 aa22.64■■□□□ 1.21
CAPN1-220ENST00000530567 DAAM1Q9Y4D1 1078 aa22.64■■□□□ 1.21
CAPN1-220ENST00000530567 USP15Q9Y4E8 981 aaPredicted RBP22.64■■□□□ 1.21
CAPN1-220ENST00000530567 NOTCH4Q99466 2003 aa22.64■■□□□ 1.21
CAPN1-220ENST00000530567 F8VZ95 297 aa22.63■■□□□ 1.21
CAPN1-220ENST00000530567 O00370 1275 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms