RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 SPATC1LQ9H0A9 340 aa12.93□□□□□ -0.34
SCN3B-206ENST00000530277 SMARCAD1Q9H4L7 1026 aa12.93□□□□□ -0.34
SCN3B-206ENST00000530277 DDX56Q9NY93 547 aaKnown RBP12.93□□□□□ -0.34
SCN3B-206ENST00000530277 ZFATQ9P243 1243 aa12.93□□□□□ -0.34
SCN3B-206ENST00000530277 GOLGA8TH3BQL2 631 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 H3BRJ5 948 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 IRF6O14896 467 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 MAFGO15525 162 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 SMIM24O75264 130 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 GPC4O75487 556 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 SKOR1P84550 965 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 RNASELQ05823 741 aaKnown RBP12.92□□□□□ -0.34
SCN3B-206ENST00000530277 MAMLD1Q13495 774 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 PLCB4Q15147 1175 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 RPS6KA2Q15349 733 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 SH2D4BQ5SQS7 431 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 DCAF12L1Q5VU92 463 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 IER5Q5VY09 327 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 DENND5BQ6ZUT9 1274 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 PIP4K2CQ8TBX8 421 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 PAFAH2Q99487 392 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 CGRRF1Q99675 332 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 SETD4Q9NVD3 440 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 HEY2Q9UBP5 337 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 MYH15Q9Y2K3 1946 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 LCA5LO95447 670 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 ELK3P41970 407 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 MARSP56192 900 aaKnown RBP12.92□□□□□ -0.34
SCN3B-206ENST00000530277 NFIL3Q16649 462 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 BEST2Q8NFU1 509 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 OR6J1Q8NGC5 347 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 FAM172AQ8WUF8 416 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 SERPINB12Q96P63 405 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 THTPAQ9BU02 230 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 USP18Q9UMW8 372 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 DGKIO75912 1065 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 PYGBP11216 843 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 RBP5P82980 135 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 BMT2Q1RMZ1 405 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 COBLL1Q53SF7 1204 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 GBP5Q96PP8 586 aa12.92□□□□□ -0.34
SCN3B-206ENST00000530277 DFFAO00273 331 aa12.91□□□□□ -0.34
SCN3B-206ENST00000530277 FDX1P10109 184 aa12.91□□□□□ -0.34
SCN3B-206ENST00000530277 BGNP21810 368 aa12.91□□□□□ -0.34
SCN3B-206ENST00000530277 NDST1P52848 882 aa12.91□□□□□ -0.34
SCN3B-206ENST00000530277 CAPSQ13938 189 aa12.91□□□□□ -0.34
SCN3B-206ENST00000530277 SPDL1Q96EA4 605 aa12.91□□□□□ -0.34
SCN3B-206ENST00000530277 PDGFCQ9NRA1 345 aa12.91□□□□□ -0.34
SCN3B-206ENST00000530277 AFG3L2Q9Y4W6 797 aa12.91□□□□□ -0.34
SCN3B-206ENST00000530277 ZNF142P52746 1687 aaPredicted RBP12.91□□□□□ -0.34
SCN3B-206ENST00000530277 KCNK1O00180 336 aa12.91□□□□□ -0.34
SCN3B-206ENST00000530277 NFICP08651 508 aa12.91□□□□□ -0.34
SCN3B-206ENST00000530277 C6orf222P0C671 652 aaPredicted RBP12.91□□□□□ -0.34
SCN3B-206ENST00000530277 MAPTP10636 758 aaKnown RBP12.91□□□□□ -0.34
SCN3B-206ENST00000530277 TCF4P15884 667 aa12.91□□□□□ -0.34
SCN3B-206ENST00000530277 TCN1P20061 433 aaPredicted RBP12.91□□□□□ -0.34
SCN3B-206ENST00000530277 GPD1P21695 349 aa12.91□□□□□ -0.34
SCN3B-206ENST00000530277 COPS2P61201 443 aa12.91□□□□□ -0.34
SCN3B-206ENST00000530277 PTPN11Q06124 597 aaPredicted RBP12.91□□□□□ -0.34
SCN3B-206ENST00000530277 EFTUD2Q15029 972 aaKnown RBP eCLIP12.91□□□□□ -0.34
SCN3B-206ENST00000530277 CCNG2Q16589 344 aa12.91□□□□□ -0.34
SCN3B-206ENST00000530277 WDR75Q8IWA0 830 aaKnown RBP12.91□□□□□ -0.34
SCN3B-206ENST00000530277 SLC26A7Q8TE54 656 aa12.91□□□□□ -0.34
SCN3B-206ENST00000530277 PPWD1Q96BP3 646 aaKnown RBP12.91□□□□□ -0.34
SCN3B-206ENST00000530277 ERAP1Q9NZ08 941 aa12.91□□□□□ -0.34
SCN3B-206ENST00000530277 MYO9BQ13459 2157 aa12.91□□□□□ -0.34
SCN3B-206ENST00000530277 SULT1E1P49888 294 aa12.91□□□□□ -0.34
SCN3B-206ENST00000530277 GCNT1Q02742 428 aa12.91□□□□□ -0.34
SCN3B-206ENST00000530277 CHI3L2Q15782 390 aa12.91□□□□□ -0.34
SCN3B-206ENST00000530277 SLC25A41Q8N5S1 370 aa12.91□□□□□ -0.34
SCN3B-206ENST00000530277 JOSD2Q8TAC2 188 aa12.91□□□□□ -0.34
SCN3B-206ENST00000530277 PDCD6IPQ8WUM4 868 aaKnown RBP12.91□□□□□ -0.34
SCN3B-206ENST00000530277 KAT2BQ92831 832 aa12.91□□□□□ -0.34
SCN3B-206ENST00000530277 HDAC11Q96DB2 347 aa12.91□□□□□ -0.34
SCN3B-206ENST00000530277 C17orf75Q9HAS0 396 aa12.91□□□□□ -0.34
SCN3B-206ENST00000530277 PFDN4Q9NQP4 134 aa12.91□□□□□ -0.34
SCN3B-206ENST00000530277 NR2E3Q9Y5X4 410 aa12.91□□□□□ -0.34
SCN3B-206ENST00000530277 A0A1W2PPM1 405 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 B2RBV5 119 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 SLC26A4O43511 780 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 ADCY3O60266 1144 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 HMBSP08397 361 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 MIPP30301 263 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 RPA3P35244 121 aaPredicted RBP12.9□□□□□ -0.34
SCN3B-206ENST00000530277 JAM2P57087 298 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 PCSK7Q16549 785 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 TREML2Q5T2D2 321 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 RGS9BPQ6ZS82 235 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 HELQQ8TDG4 1101 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 TCP10LQ8TDR4 215 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 SH3GL2Q99962 352 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 ROPN1BQ9BZX4 212 aaPredicted RBP12.9□□□□□ -0.34
SCN3B-206ENST00000530277 ROPN1Q9HAT0 212 aaPredicted RBP12.9□□□□□ -0.34
SCN3B-206ENST00000530277 DPP3Q9NY33 737 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 SNTG2Q9NY99 539 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 PARP4Q9UKK3 1724 aaKnown RBP12.9□□□□□ -0.34
SCN3B-206ENST00000530277 E5RJQ4 531 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 EDIL3O43854 480 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 CYP2C9P11712 490 aa12.9□□□□□ -0.34
SCN3B-206ENST00000530277 CHRNB2P17787 502 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms