RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 UPK3BL2E5RIL1 263 aa9.21□□□□□ -0.94
SSBP3-212ENST00000528930 C2CD2LO14523 706 aa9.21□□□□□ -0.94
SSBP3-212ENST00000528930 TOM1L1O75674 476 aa9.21□□□□□ -0.94
SSBP3-212ENST00000528930 FAM13AO94988 1023 aa9.21□□□□□ -0.94
SSBP3-212ENST00000528930 CAVIN2O95810 425 aa9.21□□□□□ -0.94
SSBP3-212ENST00000528930 GLUD1P00367 558 aa9.21□□□□□ -0.94
SSBP3-212ENST00000528930 C1RP00736 705 aa9.21□□□□□ -0.94
SSBP3-212ENST00000528930 F12P00748 615 aaPredicted RBP9.21□□□□□ -0.94
SSBP3-212ENST00000528930 THP07101 528 aa9.21□□□□□ -0.94
SSBP3-212ENST00000528930 MCF2P10911 925 aa9.21□□□□□ -0.94
SSBP3-212ENST00000528930 IGFBP6P24592 240 aaPredicted RBP9.21□□□□□ -0.94
SSBP3-212ENST00000528930 NMT1P30419 496 aaKnown RBP9.21□□□□□ -0.94
SSBP3-212ENST00000528930 RDXP35241 583 aaKnown RBP9.21□□□□□ -0.94
SSBP3-212ENST00000528930 ABCG1P45844 678 aa9.21□□□□□ -0.94
SSBP3-212ENST00000528930 GTF2BQ00403 316 aa9.21□□□□□ -0.94
SSBP3-212ENST00000528930 STRN3Q13033 797 aa9.21□□□□□ -0.94
SSBP3-212ENST00000528930 TUSC3Q13454 348 aa9.21□□□□□ -0.94
SSBP3-212ENST00000528930 FOXD4L6Q3SYB3 417 aaPredicted RBP9.21□□□□□ -0.94
SSBP3-212ENST00000528930 ZNF568Q3ZCX4 644 aa9.21□□□□□ -0.94
SSBP3-212ENST00000528930 PLK5Q496M5 336 aa9.21□□□□□ -0.94
SSBP3-212ENST00000528930 AXDND1Q5T1B0 1012 aaPredicted RBP9.21□□□□□ -0.94
SSBP3-212ENST00000528930 SHC4Q6S5L8 630 aa9.21□□□□□ -0.94
SSBP3-212ENST00000528930 MPZL3Q6UWV2 235 aa9.21□□□□□ -0.94
SSBP3-212ENST00000528930 FOXD4L3Q6VB84 417 aaPredicted RBP9.21□□□□□ -0.94
SSBP3-212ENST00000528930 ZPBP2Q6X784 338 aa9.21□□□□□ -0.94
SSBP3-212ENST00000528930 SV2BQ7L1I2 683 aa9.21□□□□□ -0.94
SSBP3-212ENST00000528930 TMEM151AQ8N4L1 468 aa9.21□□□□□ -0.94
SSBP3-212ENST00000528930 MYCT1Q8N699 235 aa9.21□□□□□ -0.94
SSBP3-212ENST00000528930 FAM181AQ8N9Y4 354 aa9.21□□□□□ -0.94
SSBP3-212ENST00000528930 PPP1R10Q96QC0 940 aaKnown RBP9.21□□□□□ -0.94
SSBP3-212ENST00000528930 HERC2P3Q9BVR0 1158 aa9.21□□□□□ -0.94
SSBP3-212ENST00000528930 COLEC11Q9BWP8 271 aa9.21□□□□□ -0.94
SSBP3-212ENST00000528930 GPR62Q9BZJ7 368 aa9.21□□□□□ -0.94
SSBP3-212ENST00000528930 PIDD1Q9HB75 910 aa9.21□□□□□ -0.94
SSBP3-212ENST00000528930 PARVGQ9HBI0 331 aa9.21□□□□□ -0.94
SSBP3-212ENST00000528930 CHST7Q9NS84 486 aa9.21□□□□□ -0.94
SSBP3-212ENST00000528930 STK39Q9UEW8 545 aa9.21□□□□□ -0.94
SSBP3-212ENST00000528930 TBX20Q9UMR3 447 aa9.21□□□□□ -0.94
SSBP3-212ENST00000528930 FBN2P35556 2912 aa9.21□□□□□ -0.94
SSBP3-212ENST00000528930 NBPF19A0A087WUL8 3843 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 RELNP78509 3460 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 ATMQ13315 3056 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 SMIM28A0A1B0GU29 152 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 CASTOR2A6NHX0 329 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 FIGNL2A6NMB9 653 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 H0YCG3 227 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 K7ENM7 598 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 CUTAO60888 179 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 ECI2O75521 394 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 PIGRP01833 764 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 KRT18P05783 430 aaKnown RBP9.2□□□□□ -0.94
SSBP3-212ENST00000528930 ADH1AP07327 375 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 TXLNAP40222 546 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 OSTNP61366 133 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 DSG1Q02413 1049 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 DNM1Q05193 864 aaKnown RBP9.2□□□□□ -0.94
SSBP3-212ENST00000528930 MCL1Q07820 350 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 HSP90AA2PQ14568 343 aaPredicted RBP9.2□□□□□ -0.94
SSBP3-212ENST00000528930 SLC10A6Q3KNW5 377 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 GLRA4Q5JXX5 417 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 ATL3Q6DD88 541 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 FUT10Q6P4F1 479 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 SLC39A4Q6P5W5 647 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 CD300LGQ6UXG3 332 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 CCDC73Q6ZRK6 1079 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 DYMQ7RTS9 669 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 ZNF720Q7Z2F6 126 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 APBB1IPQ7Z5R6 666 aaPredicted RBP9.2□□□□□ -0.94
SSBP3-212ENST00000528930 MEIOBQ8N635 442 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 PDILTQ8N807 584 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 ADAMTS14Q8WXS8 1223 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 FAM3CQ92520 227 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 ZMAT2Q96NC0 199 aaKnown RBP9.2□□□□□ -0.94
SSBP3-212ENST00000528930 TCHPQ9BT92 498 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 STRA6Q9BX79 667 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 ST6GALNAC4Q9H4F1 302 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 PLEKHA4Q9H4M7 779 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 ADAM28Q9UKQ2 775 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 PCDHA7Q9UN72 937 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 PTPRDP23468 1912 aa9.2□□□□□ -0.94
SSBP3-212ENST00000528930 MYO16Q9Y6X6 1858 aa9.19□□□□□ -0.94
SSBP3-212ENST00000528930 PCDH15Q96QU1 1955 aa9.19□□□□□ -0.94
SSBP3-212ENST00000528930 FRMD3A2A2Y4 597 aa9.19□□□□□ -0.94
SSBP3-212ENST00000528930 TEX28O15482 410 aa9.19□□□□□ -0.94
SSBP3-212ENST00000528930 CLDN3O15551 220 aa9.19□□□□□ -0.94
SSBP3-212ENST00000528930 FAM189A1O60320 539 aa9.19□□□□□ -0.94
SSBP3-212ENST00000528930 TBCAO75347 108 aaKnown RBP9.19□□□□□ -0.94
SSBP3-212ENST00000528930 KIF4AO95239 1232 aa9.19□□□□□ -0.94
SSBP3-212ENST00000528930 HARSP12081 509 aaKnown RBP9.19□□□□□ -0.94
SSBP3-212ENST00000528930 KCNE1P15382 129 aa9.19□□□□□ -0.94
SSBP3-212ENST00000528930 SCP2P22307 547 aa9.19□□□□□ -0.94
SSBP3-212ENST00000528930 GLUD2P49448 558 aa9.19□□□□□ -0.94
SSBP3-212ENST00000528930 CSRP3P50461 194 aa9.19□□□□□ -0.94
SSBP3-212ENST00000528930 CLCNKBP51801 687 aa9.19□□□□□ -0.94
SSBP3-212ENST00000528930 YARSP54577 528 aaKnown RBP9.19□□□□□ -0.94
SSBP3-212ENST00000528930 SOX4Q06945 474 aaPredicted RBP9.19□□□□□ -0.94
SSBP3-212ENST00000528930 SEMA3BQ13214 749 aa9.19□□□□□ -0.94
SSBP3-212ENST00000528930 NOLC1Q14978 699 aaKnown RBP eCLIP9.19□□□□□ -0.94
SSBP3-212ENST00000528930 USP41Q3LFD5 358 aa9.19□□□□□ -0.94
SSBP3-212ENST00000528930 SEZ6Q53EL9 994 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms