RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 RPF1Q9H9Y2 349 aaKnown RBP18.72■□□□□ 0.59
LTBP3-210ENST00000528516 JPH1Q9HDC5 661 aaPredicted RBP18.72■□□□□ 0.59
LTBP3-210ENST00000528516 NCANO14594 1321 aa18.72■□□□□ 0.59
LTBP3-210ENST00000528516 UBE4BO95155 1302 aa18.72■□□□□ 0.59
LTBP3-210ENST00000528516 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.72■□□□□ 0.59
LTBP3-210ENST00000528516 HOXA7P31268 230 aaPredicted RBP18.72■□□□□ 0.59
LTBP3-210ENST00000528516 MAGEA4P43358 317 aa18.72■□□□□ 0.59
LTBP3-210ENST00000528516 RAPH1Q70E73 1250 aa18.72■□□□□ 0.59
LTBP3-210ENST00000528516 DPP9Q86TI2 863 aa18.72■□□□□ 0.59
LTBP3-210ENST00000528516 AKT1S1Q96B36 256 aa18.72■□□□□ 0.59
LTBP3-210ENST00000528516 FAM136AQ96C01 138 aa18.72■□□□□ 0.59
LTBP3-210ENST00000528516 DNAJC1Q96KC8 554 aaKnown RBP18.72■□□□□ 0.59
LTBP3-210ENST00000528516 TUBB6Q9BUF5 446 aa18.72■□□□□ 0.59
LTBP3-210ENST00000528516 ZNF302Q9NR11 478 aa18.72■□□□□ 0.59
LTBP3-210ENST00000528516 HERC5Q9UII4 1024 aaKnown RBP18.72■□□□□ 0.59
LTBP3-210ENST00000528516 AKAP11Q9UKA4 1901 aa18.72■□□□□ 0.59
LTBP3-210ENST00000528516 NUP188Q5SRE5 1749 aa18.72■□□□□ 0.59
LTBP3-210ENST00000528516 HNRNPCL1O60812 293 aaKnown RBP18.72■□□□□ 0.59
LTBP3-210ENST00000528516 USP1O94782 785 aa18.72■□□□□ 0.59
LTBP3-210ENST00000528516 CDH6P55285 790 aa18.72■□□□□ 0.59
LTBP3-210ENST00000528516 MARSP56192 900 aaKnown RBP18.72■□□□□ 0.59
LTBP3-210ENST00000528516 MED21Q13503 144 aa18.72■□□□□ 0.59
LTBP3-210ENST00000528516 SLC45A4Q5BKX6 768 aa18.72■□□□□ 0.59
LTBP3-210ENST00000528516 CYP4F11Q9HBI6 524 aa18.72■□□□□ 0.59
LTBP3-210ENST00000528516 M0QYV0 167 aa18.71■□□□□ 0.59
LTBP3-210ENST00000528516 PRKCEQ02156 737 aa18.71■□□□□ 0.59
LTBP3-210ENST00000528516 LMNB2Q03252 620 aa18.71■□□□□ 0.59
LTBP3-210ENST00000528516 STXBP2Q15833 593 aa18.71■□□□□ 0.59
LTBP3-210ENST00000528516 MIPEPQ99797 713 aa18.71■□□□□ 0.59
LTBP3-210ENST00000528516 MKNK1Q9BUB5 465 aa18.71■□□□□ 0.59
LTBP3-210ENST00000528516 TJP1Q07157 1748 aa18.71■□□□□ 0.59
LTBP3-210ENST00000528516 ZBTB48P10074 688 aaPredicted RBP18.71■□□□□ 0.59
LTBP3-210ENST00000528516 P4HA1P13674 534 aa18.71■□□□□ 0.59
LTBP3-210ENST00000528516 NCOA4Q13772 614 aa18.71■□□□□ 0.59
LTBP3-210ENST00000528516 FAM160B1Q5W0V3 765 aa18.71■□□□□ 0.59
LTBP3-210ENST00000528516 MARK2Q7KZI7 788 aaKnown RBP18.71■□□□□ 0.59
LTBP3-210ENST00000528516 ZDHHC14Q8IZN3 488 aa18.71■□□□□ 0.59
LTBP3-210ENST00000528516 SMC1BQ8NDV3 1235 aa18.71■□□□□ 0.59
LTBP3-210ENST00000528516 ZNF75CPQ92670 426 aaPredicted RBP18.71■□□□□ 0.59
LTBP3-210ENST00000528516 ATP2A3Q93084 1043 aa18.71■□□□□ 0.59
LTBP3-210ENST00000528516 CLMNQ96JQ2 1002 aa18.71■□□□□ 0.59
LTBP3-210ENST00000528516 ZNF212Q9UDV6 495 aa18.71■□□□□ 0.59
LTBP3-210ENST00000528516 APRTP07741 180 aa18.71■□□□□ 0.59
LTBP3-210ENST00000528516 KRT4P19013 534 aa18.71■□□□□ 0.59
LTBP3-210ENST00000528516 SREBF1P36956 1147 aa18.71■□□□□ 0.59
LTBP3-210ENST00000528516 NLRP11P59045 1033 aaKnown RBP18.71■□□□□ 0.59
LTBP3-210ENST00000528516 IL31Q6EBC2 164 aa18.71■□□□□ 0.59
LTBP3-210ENST00000528516 RGS9BPQ6ZS82 235 aa18.71■□□□□ 0.59
LTBP3-210ENST00000528516 ZSWIM2Q8NEG5 633 aa18.71■□□□□ 0.59
LTBP3-210ENST00000528516 AGAP3Q96P47 875 aa18.71■□□□□ 0.59
LTBP3-210ENST00000528516 PLEKHG4BQ96PX9 1271 aa18.71■□□□□ 0.59
LTBP3-210ENST00000528516 TRAF3IP3Q9Y228 551 aa18.71■□□□□ 0.59
LTBP3-210ENST00000528516 COMMD3-BMI1R4GMX3 469 aa18.71■□□□□ 0.59
LTBP3-210ENST00000528516 TMCC1O94876 653 aa18.7■□□□□ 0.58
LTBP3-210ENST00000528516 TM4SF1P30408 202 aa18.7■□□□□ 0.58
LTBP3-210ENST00000528516 BAG6P46379 1132 aa18.7■□□□□ 0.58
LTBP3-210ENST00000528516 JAK3P52333 1124 aa18.7■□□□□ 0.58
LTBP3-210ENST00000528516 ATXN3P54252 364 aaPredicted RBP18.7■□□□□ 0.58
LTBP3-210ENST00000528516 SV2AQ7L0J3 742 aa18.7■□□□□ 0.58
LTBP3-210ENST00000528516 EMC1Q8N766 993 aa18.7■□□□□ 0.58
LTBP3-210ENST00000528516 UBA3Q8TBC4 463 aa18.7■□□□□ 0.58
LTBP3-210ENST00000528516 TRIM11Q96F44 468 aa18.7■□□□□ 0.58
LTBP3-210ENST00000528516 TMCO1Q9UM00 188 aa18.7■□□□□ 0.58
LTBP3-210ENST00000528516 SMG5Q9UPR3 1016 aaKnown RBP18.7■□□□□ 0.58
LTBP3-210ENST00000528516 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.7■□□□□ 0.58
LTBP3-210ENST00000528516 GOLGB1Q14789 3259 aaKnown RBP18.7■□□□□ 0.58
LTBP3-210ENST00000528516 H0YCG3 227 aa18.7■□□□□ 0.58
LTBP3-210ENST00000528516 STK10O94804 968 aaKnown RBP18.7■□□□□ 0.58
LTBP3-210ENST00000528516 PGM3O95394 542 aa18.7■□□□□ 0.58
LTBP3-210ENST00000528516 NR1H3Q13133 447 aa18.7■□□□□ 0.58
LTBP3-210ENST00000528516 SLC1A5Q15758 541 aa18.7■□□□□ 0.58
LTBP3-210ENST00000528516 GRAMD1BQ3KR37 738 aa18.7■□□□□ 0.58
LTBP3-210ENST00000528516 RFWD2Q8NHY2 731 aa18.7■□□□□ 0.58
LTBP3-210ENST00000528516 RAB3IL1Q8TBN0 382 aa18.7■□□□□ 0.58
LTBP3-210ENST00000528516 IFT122Q9HBG6 1241 aa18.7■□□□□ 0.58
LTBP3-210ENST00000528516 STX18Q9P2W9 335 aaKnown RBP18.7■□□□□ 0.58
LTBP3-210ENST00000528516 PAPPAQ13219 1627 aa18.7■□□□□ 0.58
LTBP3-210ENST00000528516 ADGRA3Q8IWK6 1321 aa18.7■□□□□ 0.58
LTBP3-210ENST00000528516 MEIS2O14770 477 aa18.7■□□□□ 0.58
LTBP3-210ENST00000528516 FGRP09769 529 aa18.7■□□□□ 0.58
LTBP3-210ENST00000528516 AMPD1P23109 780 aa18.7■□□□□ 0.58
LTBP3-210ENST00000528516 GTF2H1P32780 548 aa18.7■□□□□ 0.58
LTBP3-210ENST00000528516 CIITAP33076 1130 aa18.7■□□□□ 0.58
LTBP3-210ENST00000528516 PPP3CAQ08209 521 aa18.7■□□□□ 0.58
LTBP3-210ENST00000528516 ATL2Q8NHH9 583 aa18.7■□□□□ 0.58
LTBP3-210ENST00000528516 C10orf82Q8WW14 230 aa18.7■□□□□ 0.58
LTBP3-210ENST00000528516 ZBTB45Q96K62 511 aaPredicted RBP18.7■□□□□ 0.58
LTBP3-210ENST00000528516 SLC38A10Q9HBR0 1119 aa18.7■□□□□ 0.58
LTBP3-210ENST00000528516 SIX2Q9NPC8 291 aa18.7■□□□□ 0.58
LTBP3-210ENST00000528516 SAR1AQ9NR31 198 aa18.7■□□□□ 0.58
LTBP3-210ENST00000528516 FAM49BQ9NUQ9 324 aa18.7■□□□□ 0.58
LTBP3-210ENST00000528516 NEU2Q9Y3R4 380 aa18.7■□□□□ 0.58
LTBP3-210ENST00000528516 C2orf71A6NGG8 1288 aa18.69■□□□□ 0.58
LTBP3-210ENST00000528516 SUPT3HO75486 399 aa18.69■□□□□ 0.58
LTBP3-210ENST00000528516 NPTX2P47972 431 aa18.69■□□□□ 0.58
LTBP3-210ENST00000528516 PDK4Q16654 411 aa18.69■□□□□ 0.58
LTBP3-210ENST00000528516 CCDC14Q49A88 953 aa18.69■□□□□ 0.58
LTBP3-210ENST00000528516 C12orf65Q9H3J6 166 aaKnown RBP18.69■□□□□ 0.58
LTBP3-210ENST00000528516 SAE1Q9UBE0 346 aaPredicted RBP18.69■□□□□ 0.58
LTBP3-210ENST00000528516 TBX3O15119 743 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms