RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 FAM49BQ9NUQ9 324 aa8.15□□□□□ -1.1
SOX6-211ENST00000528429 BARX2Q9UMQ3 279 aaPredicted RBP8.15□□□□□ -1.1
SOX6-211ENST00000528429 USTQ9Y2C2 406 aa8.15□□□□□ -1.1
SOX6-211ENST00000528429 PIK3R2O00459 728 aa8.15□□□□□ -1.11
SOX6-211ENST00000528429 GPR182O15218 404 aa8.15□□□□□ -1.11
SOX6-211ENST00000528429 XPOTO43592 962 aaKnown RBP8.15□□□□□ -1.11
SOX6-211ENST00000528429 AP1G2O75843 785 aa8.15□□□□□ -1.11
SOX6-211ENST00000528429 CD4P01730 458 aa8.15□□□□□ -1.11
SOX6-211ENST00000528429 FGGP02679 453 aa8.15□□□□□ -1.11
SOX6-211ENST00000528429 MYBL1P10243 752 aa8.15□□□□□ -1.11
SOX6-211ENST00000528429 ITGA4P13612 1032 aa8.15□□□□□ -1.11
SOX6-211ENST00000528429 ZNF24P17028 368 aa8.15□□□□□ -1.11
SOX6-211ENST00000528429 ATF7P17544 494 aaPredicted RBP8.15□□□□□ -1.11
SOX6-211ENST00000528429 MMP8P22894 467 aa8.15□□□□□ -1.11
SOX6-211ENST00000528429 TUBB4BP68371 445 aa8.15□□□□□ -1.11
SOX6-211ENST00000528429 MAMLD1Q13495 774 aa8.15□□□□□ -1.11
SOX6-211ENST00000528429 DCAF12L1Q5VU92 463 aa8.15□□□□□ -1.11
SOX6-211ENST00000528429 C8orf74Q6P047 294 aa8.15□□□□□ -1.11
SOX6-211ENST00000528429 ACOT1Q86TX2 421 aa8.15□□□□□ -1.11
SOX6-211ENST00000528429 PHF13Q86YI8 300 aaPredicted RBP8.15□□□□□ -1.11
SOX6-211ENST00000528429 USP38Q8NB14 1042 aa8.15□□□□□ -1.11
SOX6-211ENST00000528429 SLAIN1Q8ND83 568 aa8.15□□□□□ -1.11
SOX6-211ENST00000528429 UBA3Q8TBC4 463 aa8.15□□□□□ -1.11
SOX6-211ENST00000528429 HDAC7Q8WUI4 952 aa8.15□□□□□ -1.11
SOX6-211ENST00000528429 MRRFQ96E11 262 aaKnown RBP8.15□□□□□ -1.11
SOX6-211ENST00000528429 RNPC3Q96LT9 517 aaKnown RBP8.15□□□□□ -1.11
SOX6-211ENST00000528429 KRT12Q99456 494 aa8.15□□□□□ -1.11
SOX6-211ENST00000528429 NT5C1AQ9BXI3 368 aa8.15□□□□□ -1.11
SOX6-211ENST00000528429 RNF14Q9UBS8 474 aa8.15□□□□□ -1.11
SOX6-211ENST00000528429 TJP2Q9UDY2 1190 aa8.15□□□□□ -1.11
SOX6-211ENST00000528429 TRIP11Q15643 1979 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 CASP8AP2Q9UKL3 1982 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 A0A1W2PQ45 241 aaPredicted RBP8.14□□□□□ -1.11
SOX6-211ENST00000528429 A0A1W2PQY0 241 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 KRIT1O00522 736 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 PTGESO14684 152 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 SPTLC1O15269 473 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 DDX3YO15523 660 aaKnown RBP8.14□□□□□ -1.11
SOX6-211ENST00000528429 HCRTO43612 131 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 CABYRO75952 493 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 MTA2O94776 668 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 LSM8O95777 96 aaKnown RBP8.14□□□□□ -1.11
SOX6-211ENST00000528429 GNRH1P01148 92 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 PAEPP09466 180 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 PDGFRBP09619 1106 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 RPL7AP62424 266 aaKnown RBP8.14□□□□□ -1.11
SOX6-211ENST00000528429 C1QBPQ07021 282 aaKnown RBP8.14□□□□□ -1.11
SOX6-211ENST00000528429 PTP4A2Q12974 167 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 SGO2Q562F6 1265 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 HSP90B2PQ58FF3 399 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 ZNF618Q5T7W0 954 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 LHX8Q68G74 356 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 DNAJC24Q6P3W2 148 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 DCUN1D2Q6PH85 259 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 HACE1Q8IYU2 909 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 WDTC1Q8N5D0 677 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 LRRC52Q8N7C0 313 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 SREK1Q8WXA9 508 aaKnown RBP8.14□□□□□ -1.11
SOX6-211ENST00000528429 MCEEQ96PE7 176 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 LPIN3Q9BQK8 851 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.14□□□□□ -1.11
SOX6-211ENST00000528429 BEGAINQ9BUH8 593 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 MRPL47Q9HD33 250 aaKnown RBP8.14□□□□□ -1.11
SOX6-211ENST00000528429 AVENQ9NQS1 362 aaPredicted RBP8.14□□□□□ -1.11
SOX6-211ENST00000528429 LMCD1Q9NZU5 365 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 INPP5FQ9Y2H2 1132 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 MKI67P46013 3256 aaKnown RBP8.14□□□□□ -1.11
SOX6-211ENST00000528429 KPNA7A9QM74 516 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 MIF4GDA9UHW6 222 aaKnown RBP8.14□□□□□ -1.11
SOX6-211ENST00000528429 MGEA5O60502 916 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 MICAL2O94851 1124 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 CALB1P05937 261 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 KCNE1P15382 129 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 ENPP1P22413 925 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 SCNN1GP51170 649 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 RPS6KA3P51812 740 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 MGAT3Q09327 533 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 LPIN1Q14693 890 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 LONRF2Q1L5Z9 754 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 PTPN20Q4JDL3 420 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 TRIM42Q8IWZ5 723 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 MSANTD4Q8NCY6 345 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 ZNF560Q96MR9 790 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 ADAM2Q99965 735 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 ARFGAP3Q9NP61 516 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 PARVAQ9NVD7 372 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 DMGDHQ9UI17 866 aaKnown RBP8.14□□□□□ -1.11
SOX6-211ENST00000528429 CYTH4Q9UIA0 394 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 PCDHGC3Q9UN70 934 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 SCINQ9Y6U3 715 aa8.14□□□□□ -1.11
SOX6-211ENST00000528429 SCN1AP35498 2009 aa8.13□□□□□ -1.11
SOX6-211ENST00000528429 MOXD2PA6NHM9 499 aa8.13□□□□□ -1.11
SOX6-211ENST00000528429 CASTOR2A6NHX0 329 aa8.13□□□□□ -1.11
SOX6-211ENST00000528429 A8MXQ7 604 aa8.13□□□□□ -1.11
SOX6-211ENST00000528429 KBTBD13C9JR72 458 aa8.13□□□□□ -1.11
SOX6-211ENST00000528429 O00370 1275 aa8.13□□□□□ -1.11
SOX6-211ENST00000528429 PYGLP06737 847 aa8.13□□□□□ -1.11
SOX6-211ENST00000528429 VDRP11473 427 aa8.13□□□□□ -1.11
SOX6-211ENST00000528429 IGFBP6P24592 240 aaPredicted RBP8.13□□□□□ -1.11
SOX6-211ENST00000528429 TAF6P49848 677 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms