RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	PSMC2	P35998	433 aa	Known RBP	12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	RAP1GAP	P47736	663 aa		12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	NUBP1	P53384	320 aa		12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	PMS1	P54277	932 aa	Known RBP	12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	PTPN5	P54829	565 aa		12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	CDH8	P55286	799 aa		12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	NLRP12	P59046	1061 aa		12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	STARD6	P59095	220 aa		12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	RPL10A	P62906	217 aa	Known RBP	12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	PFKP	Q01813	784 aa		12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	PPP3CA	Q08209	521 aa		12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	MAPRE1	Q15691	268 aa	Known RBP	12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	MLF2	Q15773	248 aa	Predicted RBP	12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	TAF12	Q16514	161 aa		12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	SLC44A4	Q53GD3	710 aa		12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	ARHGAP15	Q53QZ3	475 aa		12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	ZNF667	Q5HYK9	610 aa		12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	MDH1B	Q5I0G3	518 aa		12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	SCARA5	Q6ZMJ2	495 aa		12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	C4orf50	Q6ZRC1	276 aa		12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	INTS8	Q75QN2	995 aa	Known RBP	12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	GPIHBP1	Q8IV16	184 aa		12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	ARID3B	Q8IVW6	561 aa	Predicted RBP	12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	ELOA2	Q8IYF1	753 aa	Predicted RBP	12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	MYCBPAP	Q8TBZ2	947 aa		12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	DEPDC1B	Q8WUY9	529 aa		12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	PCED1B	Q96HM7	432 aa		12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	GCNA	Q96QF7	691 aa		12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	DDX23	Q9BUQ8	820 aa	Known RBP	12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	TRMT61B	Q9BVS5	477 aa	Known RBP	12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	FOXQ1	Q9C009	403 aa		12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	SDCBP2	Q9H190	292 aa		12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	MYO10	Q9HD67	2058 aa		12.56	□□□□□ -0.4
PSMC3-205	ENST00000528362	CACNA1H	O95180	2353 aa		12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362	SLC38A8	A6NNN8	435 aa		12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362		A8MXQ7	604 aa		12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362	NOL4	O94818	638 aa		12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362	ASS1	P00966	412 aa	Known RBP	12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362	HLA-DRA	P01903	254 aa		12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362	PSMC3	P17980	439 aa		12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362	PTPN1	P18031	435 aa	Known RBP	12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362	RFX1	P22670	979 aa		12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362	PIK3CA	P42336	1068 aa		12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362	GCLM	P48507	274 aa		12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362	MCCD1	P59942	119 aa	Predicted RBP	12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362	CYP27A1	Q02318	531 aa		12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362	PRKCQ	Q04759	706 aa		12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362	ENPEP	Q07075	957 aa		12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362	SPOPL	Q6IQ16	392 aa		12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362	VSTM1	Q6UX27	236 aa		12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362	MFSD6L	Q8IWD5	586 aa		12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362	SCN4B	Q8IWT1	228 aa		12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362	ZC3H3	Q8IXZ2	948 aa	Known RBP	12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362	ADSSL1	Q8N142	457 aa		12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362	DNASE1L2	Q92874	299 aa		12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362	TRMT2B	Q96GJ1	504 aa	Known RBP	12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362	MYRFL	Q96LU7	910 aa		12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362	LRRC3B	Q96PB8	259 aa		12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362	SLC46A2	Q9BY10	475 aa		12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362	TASP1	Q9H6P5	420 aa		12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362	BRD9	Q9H8M2	597 aa		12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362	CHMP5	Q9NZZ3	219 aa		12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362	MAGEC2	Q9UBF1	373 aa	Predicted RBP	12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362	HOOK1	Q9UJC3	728 aa	Known RBP	12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362	MAN1B1	Q9UKM7	699 aa		12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362	MAGED2	Q9UNF1	606 aa	Predicted RBP	12.55	□□□□□ -0.4
PSMC3-205	ENST00000528362	SHISA7	A6NL88	538 aa		12.54	□□□□□ -0.4
PSMC3-205	ENST00000528362	ARNTL	O00327	626 aa		12.54	□□□□□ -0.4
PSMC3-205	ENST00000528362	KIN	O60870	393 aa	Known RBP	12.54	□□□□□ -0.4
PSMC3-205	ENST00000528362	CLSTN1	O94985	981 aa		12.54	□□□□□ -0.4
PSMC3-205	ENST00000528362	KRT13	P13646	458 aa		12.54	□□□□□ -0.4
PSMC3-205	ENST00000528362	WEE1	P30291	646 aa		12.54	□□□□□ -0.4
PSMC3-205	ENST00000528362	GDI1	P31150	447 aa		12.54	□□□□□ -0.4
PSMC3-205	ENST00000528362	ASPA	P45381	313 aa		12.54	□□□□□ -0.4
PSMC3-205	ENST00000528362	CACNA2D1	P54289	1103 aa		12.54	□□□□□ -0.4
PSMC3-205	ENST00000528362	SGSM1	Q2NKQ1	1148 aa		12.54	□□□□□ -0.4
PSMC3-205	ENST00000528362	ANKRD40	Q6AI12	368 aa		12.54	□□□□□ -0.4
PSMC3-205	ENST00000528362	TPRG1	Q6ZUI0	275 aa		12.54	□□□□□ -0.4
PSMC3-205	ENST00000528362	ALYREF	Q86V81	257 aa	Known RBP	12.54	□□□□□ -0.4
PSMC3-205	ENST00000528362	CCDC105	Q8IYK2	499 aa		12.54	□□□□□ -0.4
PSMC3-205	ENST00000528362	B3GALNT2	Q8NCR0	500 aa		12.54	□□□□□ -0.4
PSMC3-205	ENST00000528362	PJA1	Q8NG27	643 aa		12.54	□□□□□ -0.4
PSMC3-205	ENST00000528362	TAS1R2	Q8TE23	839 aa		12.54	□□□□□ -0.4
PSMC3-205	ENST00000528362	TAF4B	Q92750	862 aa		12.54	□□□□□ -0.4
PSMC3-205	ENST00000528362	E2F7	Q96AV8	911 aa		12.54	□□□□□ -0.4
PSMC3-205	ENST00000528362	SHD	Q96IW2	340 aa		12.54	□□□□□ -0.4
PSMC3-205	ENST00000528362	SPATA17	Q96L03	361 aa		12.54	□□□□□ -0.4
PSMC3-205	ENST00000528362	B3GNT5	Q9BYG0	378 aa		12.54	□□□□□ -0.4
PSMC3-205	ENST00000528362	ZNF518B	Q9C0D4	1074 aa		12.54	□□□□□ -0.4
PSMC3-205	ENST00000528362	SMG9	Q9H0W8	520 aa	Known RBP	12.54	□□□□□ -0.4
PSMC3-205	ENST00000528362	APOBEC3G	Q9HC16	384 aa	Known RBP	12.54	□□□□□ -0.4
PSMC3-205	ENST00000528362	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	12.54	□□□□□ -0.4
PSMC3-205	ENST00000528362	HEBP1	Q9NRV9	189 aa		12.54	□□□□□ -0.4
PSMC3-205	ENST00000528362	TMEM30A	Q9NV96	361 aa		12.54	□□□□□ -0.4
PSMC3-205	ENST00000528362	DLGAP2	Q9P1A6	1054 aa		12.54	□□□□□ -0.4
PSMC3-205	ENST00000528362	HMGXB4	Q9UGU5	601 aa		12.54	□□□□□ -0.4
PSMC3-205	ENST00000528362	KANSL1L	A0AUZ9	987 aa		12.53	□□□□□ -0.4
PSMC3-205	ENST00000528362	TRIM49B	A6NDI0	452 aa		12.53	□□□□□ -0.4
PSMC3-205	ENST00000528362		F8VP50	259 aa		12.53	□□□□□ -0.4
PSMC3-205	ENST00000528362		H0Y858	1186 aa		12.53	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 192.6 ms