RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 INPP4AQ96PE3 977 aaPredicted RBP4.55□□□□□ -1.68
CD44-226ENST00000527889 PSMG3-AS1Q96PY0 264 aa4.55□□□□□ -1.68
CD44-226ENST00000527889 IWS1Q96ST2 819 aa4.55□□□□□ -1.68
CD44-226ENST00000527889 PARK7Q99497 189 aaKnown RBP4.55□□□□□ -1.68
CD44-226ENST00000527889 RIT2Q99578 217 aa4.55□□□□□ -1.68
CD44-226ENST00000527889 HSD17B14Q9BPX1 270 aa4.55□□□□□ -1.68
CD44-226ENST00000527889 SH2D3AQ9BRG2 576 aa4.55□□□□□ -1.68
CD44-226ENST00000527889 REEP2Q9BRK0 252 aa4.55□□□□□ -1.68
CD44-226ENST00000527889 FGFBP2Q9BYJ0 223 aa4.55□□□□□ -1.68
CD44-226ENST00000527889 SLC13A1Q9BZW2 595 aa4.55□□□□□ -1.68
CD44-226ENST00000527889 BHMT2Q9H2M3 363 aa4.55□□□□□ -1.68
CD44-226ENST00000527889 ZHX3Q9H4I2 956 aa4.55□□□□□ -1.68
CD44-226ENST00000527889 MROH8Q9H579 483 aa4.55□□□□□ -1.68
CD44-226ENST00000527889 ACSS3Q9H6R3 686 aa4.55□□□□□ -1.68
CD44-226ENST00000527889 TUFT1Q9NNX1 390 aa4.55□□□□□ -1.68
CD44-226ENST00000527889 SLC39A2Q9NP94 309 aa4.55□□□□□ -1.68
CD44-226ENST00000527889 SAMSN1Q9NSI8 373 aaKnown RBP4.55□□□□□ -1.68
CD44-226ENST00000527889 PANK4Q9NVE7 773 aa4.55□□□□□ -1.68
CD44-226ENST00000527889 B4GALT6Q9UBX8 382 aa4.55□□□□□ -1.68
CD44-226ENST00000527889 ADD3Q9UEY8 706 aaKnown RBP4.55□□□□□ -1.68
CD44-226ENST00000527889 CPA4Q9UI42 421 aa4.55□□□□□ -1.68
CD44-226ENST00000527889 DNM3Q9UQ16 869 aa4.55□□□□□ -1.68
CD44-226ENST00000527889 SLC45A1Q9Y2W3 748 aa4.55□□□□□ -1.68
CD44-226ENST00000527889 NFE2L3Q9Y4A8 694 aa4.55□□□□□ -1.68
CD44-226ENST00000527889 MICAL3Q7RTP6 2002 aa4.55□□□□□ -1.68
CD44-226ENST00000527889 NFASCO94856 1347 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 PVALEFA0A1B0GWK0 134 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 BICDL2A1A5D9 508 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 ARHGEF35A5YM69 484 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 MANSC4A6NHS7 340 aaPredicted RBP4.54□□□□□ -1.68
CD44-226ENST00000527889 FAM155AB1AL88 458 aaPredicted RBP4.54□□□□□ -1.68
CD44-226ENST00000527889 SIGLEC6O43699 453 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 MSCO60682 206 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 USO1O60763 962 aaKnown RBP4.54□□□□□ -1.68
CD44-226ENST00000527889 ULK1O75385 1050 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 STAM2O75886 525 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 MT-CO1P00395 513 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 FAM200BP0CF97 657 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 MYBL2P10244 700 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 ATP2A2P16615 1042 aaKnown RBP4.54□□□□□ -1.68
CD44-226ENST00000527889 UBA1P22314 1058 aaKnown RBP4.54□□□□□ -1.68
CD44-226ENST00000527889 EDNRBP24530 442 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 ITGB7P26010 798 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 ADORA2AP29274 412 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 QARSP47897 775 aaKnown RBP4.54□□□□□ -1.68
CD44-226ENST00000527889 MECP2P51608 486 aaKnown RBP4.54□□□□□ -1.68
CD44-226ENST00000527889 JAK3P52333 1124 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 ACTR2P61160 394 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 TPM4P67936 248 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 PURAQ00577 322 aaKnown RBP4.54□□□□□ -1.68
CD44-226ENST00000527889 MTA1Q13330 715 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 KLF1Q13351 362 aaPredicted RBP4.54□□□□□ -1.68
CD44-226ENST00000527889 STIM1Q13586 685 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 GIT2Q14161 759 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 TPD52L1Q16890 204 aaPredicted RBP4.54□□□□□ -1.68
CD44-226ENST00000527889 LY6KQ17RY6 165 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 RSPO4Q2I0M5 234 aaPredicted RBP4.54□□□□□ -1.68
CD44-226ENST00000527889 ZNF792Q3KQV3 632 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 HERC4Q5GLZ8 1057 aaPredicted RBP4.54□□□□□ -1.68
CD44-226ENST00000527889 FAM26FQ5R3K3 315 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 TMEM63BQ5T3F8 832 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 GJC2Q5T442 439 aaPredicted RBP4.54□□□□□ -1.68
CD44-226ENST00000527889 UTP14CQ5TAP6 766 aaKnown RBP4.54□□□□□ -1.68
CD44-226ENST00000527889 TAF3Q5VWG9 929 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 SPATA1Q5VX52 437 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 PLA2G4FQ68DD2 849 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 RINT1Q6NUQ1 792 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 SARM1Q6SZW1 724 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 Q6ZS46 218 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 ARMCX2Q7L311 632 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 MAEAQ7L5Y9 396 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 GPR142Q7Z601 462 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 SFR1Q86XK3 245 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 CCDC60Q8IWA6 550 aaPredicted RBP4.54□□□□□ -1.68
CD44-226ENST00000527889 ZC3H7AQ8IWR0 971 aaKnown RBP4.54□□□□□ -1.68
CD44-226ENST00000527889 CCDC65Q8IXS2 484 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 DRC7Q8IY82 874 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 SYT2Q8N9I0 419 aaPredicted RBP4.54□□□□□ -1.68
CD44-226ENST00000527889 GIMAP8Q8ND71 665 aaPredicted RBP4.54□□□□□ -1.68
CD44-226ENST00000527889 PCDH19Q8TAB3 1148 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.54□□□□□ -1.68
CD44-226ENST00000527889 ENOX1Q8TC92 643 aaKnown RBP4.54□□□□□ -1.68
CD44-226ENST00000527889 NEK9Q8TD19 979 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 CHTF18Q8WVB6 975 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 TIFAQ96CG3 184 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 CCDC43Q96MW1 224 aaKnown RBP4.54□□□□□ -1.68
CD44-226ENST00000527889 MYCBPQ99417 103 aaPredicted RBP4.54□□□□□ -1.68
CD44-226ENST00000527889 CELF4Q9BZC1 486 aaKnown RBP4.54□□□□□ -1.68
CD44-226ENST00000527889 XPO4Q9C0E2 1151 aaKnown RBP4.54□□□□□ -1.68
CD44-226ENST00000527889 LRRC27Q9C0I9 530 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 MRPL18Q9H0U6 180 aaKnown RBP4.54□□□□□ -1.68
CD44-226ENST00000527889 PDGFCQ9NRA1 345 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 GPR27Q9NS67 375 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 CHST7Q9NS84 486 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 TBC1D22BQ9NU19 505 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 SPTLC3Q9NUV7 552 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 THG1LQ9NWX6 298 aaKnown RBP4.54□□□□□ -1.68
CD44-226ENST00000527889 IFNKQ9P0W0 207 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 MORF4L1Q9UBU8 362 aa4.54□□□□□ -1.68
CD44-226ENST00000527889 SLC9A2Q9UBY0 812 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms